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BMC Medical Genetics

Issue 1/2014

Content (142 Articles)

Open Access Case report

Recurrent exercise-induced acute renal failure in a young Pakistani man with severe renal hypouricemia and SLC2A9compound heterozygosity

Guido Jeannin, Nicola Chiarelli, Mario Gaggiotti, Marco Ritelli, Paolo Maiorca, Stefano Quinzani, Federica Verzeletti, Stefano Possenti, Marina Colombi, Giovanni Cancarini

Open Access Research article

A novel MIPgene mutation associated with autosomal dominant congenital cataracts in a Chinese family

Yibo Yu, Yinhui Yu, Peiqing Chen, Jinyu Li, Yanan Zhu, Yi Zhai, Ke Yao

Open Access Research article

Intergenerational and intrafamilial phenotypic variability in 22q11.2 Deletion syndrome subjects

Emilia Cirillo, Giuliana Giardino, Vera Gallo, Pamela Puliafito, Chiara Azzari, Rosa Bacchetta, Fabio Cardinale, Maria Pia Cicalese, Rita Consolini, Silvana Martino, Baldassarre Martire, Cristina Molinatto, Alessandro Plebani, Gioacchino Scarano, Annarosa Soresina, Caterina Cancrini, Paolo Rossi, Maria Cristina Digilio, Claudio Pignata

Open Access Research article

Differences in serum SP-D levels between German and Japanese subjects are associated with SFTPDgene polymorphisms

Yasushi Horimasu, Noboru Hattori, Nobuhisa Ishikawa, Sonosuke Tanaka, Francesco Bonella, Shinichiro Ohshimo, Josune Guzman, Ulrich Costabel, Nobuoki Kohno

Open Access Research article

CCL3L1 copy number, CCR5genotype and susceptibility to tuberculosis

Danielle Carpenter, Carmen Taype, Jon Goulding, Mike Levin, Brian Eley, Suzanne Anderson, Marie-Anne Shaw, John AL Armour

Open Access Case report

Adult phenotype and further phenotypic variability in SRD5A3-CDG

Bülent Kara, Özgecan Ayhan, Gülden Gökçay, Nurdan Başboğaoğlu, Aslıhan Tolun

Open Access Case report

The novel p.Cys65Tyr mutation in NR5A1gene in three 46,XY siblings with normal testosterone levels and their mother with primary ovarian insufficiency

Helena Campos Fabbri, Juliana Gabriel Ribeiro de Andrade, Fernanda Caroline Soardi, Flávia Leme de Calais, Reginaldo José Petroli, Andréa Trevas Maciel-Guerra, Gil Guerra-Júnior, Maricilda Palandi de Mello

Open Access Research article

Endothelial nitric oxide synthase gene polymorphisms and risk of diabetic nephropathy: a systematic review and meta-analysis

Bruno Schmidt Dellamea, Lana Catani Ferreira Pinto, Cristiane Bauermann Leitão, Katia Gonçalves Santos, Luis Henrique Santos Canani

Open Access Research article

Segregation analysis in families with Charcot-Marie-Tooth disease allows reclassification of putative disease causing mutations

Rune Østern, Toril Fagerheim, Helene Hjellnes, Bjørn Nygård, Svein Ivar Mellgren, Øivind Nilssen

Open Access Study protocol

A recall-by-genotype study of CHRNA5-A3-B4genotype, cotinine and smoking topography: study protocol

Jennifer J Ware, Nic Timpson, George Davey Smith, Marcus R Munafò

Open Access Research article

Genome-wide association study of bipolar disorder in Canadian and UK populations corroborates disease loci including SYNE1 and CSMD1

Wei Xu, Sarah Cohen-Woods, Qian Chen, Abdul Noor, Jo Knight, Georgina Hosang, Sagar V Parikh, Vincenzo De Luca, Federica Tozzi, Pierandrea Muglia, Julia Forte, Andrew McQuillin, Pingzhao Hu, Hugh MD Gurling, James L Kennedy, Peter McGuffin, Anne Farmer, John Strauss, John B Vincent

Open Access Research article

Associations between interleukin-1 gene polymorphisms and sepsis risk: a meta-analysis

An-qiang Zhang, Wei Pan, Jun-wei Gao, Cai-li Yue, Ling Zeng, Wei Gu, Jian-xin Jiang

Open Access Case report

Whole exome sequencing detects homozygosity for ABCA4 p.Arg602Trp missense mutation in a pediatric patient with rapidly progressive retinal dystrophy

Maria Carolina Ortube, Samuel P Strom, Stanley F Nelson, Steven Nusinowitz, Ariadna Martinez, Michael B Gorin

Open Access Reviewer acknowledgement

Annual acknowledgement of reviewers

Timothy R Sands

Open Access Research article

Molecular characteristics of mismatch repair genes in sporadic colorectal tumors in Czech patients

Veronika Polakova Vymetalkova, Jana Slyskova, Vlasta Korenkova, Ludovit Bielik, Lucie Langerova, Pavel Prochazka, Alexandra Rejhova, Lucie Schwarzova, Barbara Pardini, Alessio Naccarati, Pavel Vodicka

Open Access Research article

Diagnosis of Noonan syndrome and related disorders using target next generation sequencing

Francesca Romana Lepri, Rossana Scavelli, Maria Cristina Digilio, Maria Gnazzo, Simona Grotta, Maria Lisa Dentici, Elisa Pisaneschi, Pietro Sirleto, Rossella Capolino, Anwar Baban, Serena Russo, Tiziana Franchin, Adriano Angioni, Bruno Dallapiccola

Open Access Case report

Type II diabetes and impaired glucose tolerance due to severe hyperinsulinism in patients with 1p36 deletion syndrome and a Prader-Willi-like phenotype

Stefano Stagi, Elisabetta Lapi, Marilena Pantaleo, Francesco Chiarelli, Salvatore Seminara, Maurizio de Martino

Open Access Case report

A coalescence of two syndromes in a girl with terminal deletion and inverted duplication of chromosome 5

Danijela Krgovic, Ana Blatnik, Ante Burmas, Andreja Zagorac, Nadja Kokalj Vokac

Open Access Case report

Bronchial isomerism in a Kabuki syndrome patient with a novel mutation in MLL2gene

Gerarda Cappuccio, Alessandro Rossi, Paolo Fontana, Emma Acampora, Valeria Avolio, Giuseppe Merla, Leopoldo Zelante, Aurelio Secinaro, Generoso Andria, Daniela Melis

Open Access Research article

Genetic and functional evidence for a locus controlling otitis media at chromosome 10q26.3

Marie S Rye, Elizabeth SH Scaman, Ruth B Thornton, Shyan Vijayasekaran, Harvey L Coates, Richard W Francis, Craig E Pennell, Jenefer M Blackwell, Sarra E Jamieson

Open Access Technical advance

A simple method for gene phasing using mate pair sequencing

Kendall W Cradic, Stephen J Murphy, Travis M Drucker, Robert A Sikkink, Norman L Eberhardt, Claudia Neuhauser, George Vasmatzis, Stefan KG Grebe

Open Access Research article

Identification of fibrillin 1 gene mutations in patients with bicuspid aortic valve (BAV) without Marfan syndrome

Guglielmina Pepe, Stefano Nistri, Betti Giusti, Elena Sticchi, Monica Attanasio, Cristina Porciani, Rosanna Abbate, Robert O Bonow, Magdi Yacoub, Gian Franco Gensini

Open Access Research article

Clinical features and gene mutational spectrum of CDKL5-related diseases in a cohort of Chinese patients

Ying Zhao, Xiaoying Zhang, Xinhua Bao, Qingping Zhang, Jingjing Zhang, Guangna Cao, Jie Zhang, Jiarui Li, Liping Wei, Hong Pan, Xiru Wu

Open Access Research article

Autism-epilepsy phenotype with macrocephaly suggests PTEN, but not GLIALCAM, genetic screening

Maria Marchese, Valerio Conti, Giulia Valvo, Francesca Moro, Filippo Muratori, Raffaella Tancredi, Filippo M Santorelli, Renzo Guerrini, Federico Sicca

Open Access Research article

A novel recessive mutation in the gene ELOVL4 causes a neuro-ichthyotic disorder with variable expressivity

Hina Mir, Syed Irfan Raza, Muhammad Touseef, Mazhar Mustafa Memon, Muhammad Nasim Khan, Sulman Jaffar, Wasim Ahmad

Open Access Case report

Compound heterozygous mutations in glycyl-tRNA synthetase are a proposed cause of systemic mitochondrial disease

Hugh J McMillan, Jeremy Schwartzentruber, Amanda Smith, Suzie Lee, Pranesh Chakraborty, Dennis E Bulman, Chandree L Beaulieu, Jacek Majewski, Kym M Boycott, Michael T Geraghty

Open Access Research article

Polymorphisms in the glutathione pathway modulate cystic fibrosis severity: a cross-sectional study

Fernando Augusto de Fernando Augusto de Lima Marson, Carmen Silvia Bertuzzo, Antonio Fernando Ribeiro, Jose Dirceu Ribeiro

Open Access Research article

Hypertension after preeclampsia and relation to the C1114G polymorphism (rs4606) in RGS2: data from the Norwegian HUNT2 study

Anne Stine Kvehaugen, Øyvind Melien, Oddgeir L Holmen, Hannele Laivuori, Ralf Dechend, Anne Cathrine Staff

Open Access Research article

Mutations in Danish patients with long QT syndrome and the identification of a large founder family with p.F29L in KCNH2

Michael Christiansen, Paula L Hedley, Juliane Theilade, Birgitte Stoevring, Trond P Leren, Ole Eschen, Karina M Sørensen, Anne Tybjærg-Hansen, Lilian B Ousager, Lisbeth N Pedersen, Ruth Frikke-Schmidt, Frederik H Aidt, Michael G Hansen, Jim Hansen, Poul E Bloch Thomsen, Egon Toft, Finn L Henriksen, Henning Bundgaard, Henrik K Jensen, Jørgen K Kanters

Open Access Case report

Novel SPAST deletion and reduced DPY30 expression in a Spastic Paraplegia type 4 kindred

Loretta Racis, Eugenia Storti, Maura Pugliatti, Virgilio Agnetti, Alessandra Tessa, Filippo M Santorelli

Open Access Research article

Expression analysis of genes and pathways associated with liver metastases of the uveal melanoma

Yuanyuan Zhang, Yong Yang, Lei Chen, Jianhong Zhang

Open Access Research article

Functional polymorphism in aldehyde dehydrogenase-2 gene associated with risk of tuberculosis

Seung Kyu Park, Choon-Sik Park, Hyo-Suk Lee, Kyong Soo Park, Byung Lae Park, Hyun Sub Cheong, Hyoung Doo Shin

Open Access Research article

Novel mutations of PKD genes in the Czech population with autosomal dominant polycystic kidney disease

Lena Obeidova, Veronika Elisakova, Jitka Stekrova, Jana Reiterova, Miroslav Merta, Vladimir Tesar, Frantisek Losan, Milada Kohoutova

Open Access Study protocol

NPAS3 variants in schizophrenia: a neuroimaging study

Denise Bernier, Georgina Macintyre, Robert Bartha, Christopher C Hanstock, David McAllindon, Diane Cox, Scot Purdon, Katherine J Aitchison, Benjamin Rusak, Philip G Tibbo

Open Access Research article

A rare novel mutation in TECTA causes autosomal dominant nonsyndromic hearing loss in a Mongolian family

Haihua Bai, Xukui Yang, Temuribagen, Guilan, Suyalatu, Narisu Narisu, Huiguang Wu, Yujie Chen, Yangjian Liu, Qizhu Wu

Open Access Case report

De novo SCN2A splice site mutation in a boy with Autism spectrum disorder

Teresa Tavassoli, Alexander Kolevzon, A Ting Wang, Jocelyn Curchack-Lichtin, Danielle Halpern, Lily Schwartz, Sarah Soffes, Lauren Bush, David Grodberg, Guiqing Cai, Joseph D Buxbaum

Open Access Research article

Identification of transcription factors and single nucleotide polymorphisms of Lrh1 and its homologous genes in Lrh1-knockout pancreas of mice

Maochun Tang, Li Cheng, Rongrong Jia, Lei Qiu, Hua Liu, Shu Zhou, Xiuying Ma, Guoyong Hu, Xingpeng Wang, Yan Zhao

Open Access Research article

A novel mutation in DDR2 causing spondylo-meta-epiphyseal dysplasia with short limbs and abnormal calcifications (SMED-SL) results in defective intra-cellular trafficking

Adila Al-Kindi, Praseetha Kizhakkedath, Huifang Xu, Anne John, Abeer Al Sayegh, Anuradha Ganesh, Maha Al-Awadi, Lamya Al-Anbouri, Lihadh Al-Gazali, Birgit Leitinger, Bassam R Ali

Open Access Case report

LEOPARD syndrome: clinical dilemmas in differential diagnosis of RASopathies

Claudia Santoro, Giuseppe Pacileo, Giuseppe Limongelli, Saverio Scianguetta, Teresa Giugliano, Giulio Piluso, Fulvio Della Ragione, Mario Cirillo, Giuseppe Mirone, Silverio Perrotta

Open Access Case report

New case of trichorinophalangeal syndrome-like phenotype with a de novo t(2;8)(p16.1;q23.3) translocation which does not disrupt the TRPS1 gene

Milena Crippa, Ilaria Bestetti, Mario Perotti, Chiara Castronovo, Silvia Tabano, Chiara Picinelli, Guido Grassi, Lidia Larizza, Angela Ida Pincelli, Palma Finelli

Open Access Research article

Associations between speech features and phenotypic severity in Treacher Collins syndrome

Pamela Åsten, Harriet Akre, Christina Persson

Open Access Research article

Allelic expression analysis of the osteoarthritis susceptibility locus that maps to chromosome 3p21 reveals cis-acting eQTLs at GNL3 and SPCS1

Fiona Gee, Clare F Clubbs, Emma VA Raine, Louise N Reynard, John Loughlin

Open Access Research article

COL1A1and miR-29b show lower expression levels during osteoblast differentiation of bone marrow stromal cells from Osteogenesis Imperfecta patients

Carla M Kaneto, Patrícia SP Lima, Dalila L Zanette, Karen L Prata, João M Pina Neto, Francisco JA de Paula, Wilson A Silva Jr

Open Access Case report

Exome sequencing identifies a novel mutation in PIK3R1 as the cause of SHORT syndrome

Clea Bárcena, Víctor Quesada, Annachiara De Sandre-Giovannoli, Diana A Puente, Joaquín Fernández-Toral, Sabine Sigaudy, Anwar Baban, Nicolas Lévy, Gloria Velasco, Carlos López-Otín

Open Access Research article

Molecular basis of DEL phenotype in the Chinese population

Juan Gu, Xue-Dong Wang, Chao-Peng Shao, Jun Wang, An-Yuan Sun, Li-Hua Huang, Zhao-Lin Pan

Open Access Research article

Single nucleotide polymorphisms in TNFAIP3 were associated with the risks of rheumatoid arthritis in northern Chinese Han population

Xingang Zhang, Wei Li, Xinpeng Zhang, Liang Zhao, Xiaoli Zhang, Li Jiang, Yun Guo, Jin Zhang, Zaifu Liang, Xiaofei Wang

Open Access Research article

A replication study confirms the association of GWAS-identified SNPs at MICB and PLCE1in Thai patients with dengue shock syndrome

Tran Ngoc Dang, Izumi Naka, Areerat Sa-Ngasang, Surapee Anantapreecha, Sumalee Chanama, Nuanjun Wichukchinda, Pathom Sawanpanyalert, Jintana Patarapotikul, Naoyuki Tsuchiya, Jun Ohashi

Open Access Research article

A whole genome SNP genotyping by DNA microarray and candidate gene association study for kidney stone disease

Nanyawan Rungroj, Choochai Nettuwakul, Nirinya Sudtachat, Oranud Praditsap, Nunghathai Sawasdee, Suchai Sritippayawan, Duangporn Chuawattana, Pa-thai Yenchitsomanus

Open Access Research article

EDAR-induced hypohidrotic ectodermal dysplasia: a clinical study on signs and symptoms in individuals with a heterozygous c.1072C > T mutation

Catarina Falk Kieri, Birgitta Bergendal, Lisbet K Lind, Marcus Schmitt-Egenolf, Christina Stecksén-Blicks

Open Access Case report

A large de novo9p21.3 deletion in a girl affected by astrocytoma and multiple melanoma

Simona Frigerio, Vittoria Disciglio, Siranoush Manoukian, Bernard Peissel, Gabriella Della Torre, Andrea Maurichi, Paola Collini, Barbara Pasini, Giacomo Gotti, Andrea Ferrari, Licia Rivoltini, Maura Massimino, Monica Rodolfo

Open Access Research article

Apolipoprotein E gene ε4ε4 is associated with elevated risk of primary open angle glaucoma in Asians: a meta-analysis

Yong Wang, Yan-Feng Zhou, Bing-Ying Zhao, Zheng-Yu Gu, Shou-Ling Li

Open Access Research article

Coeliac disease and risk for other autoimmune diseases in patients with Williams-Beuren syndrome

Stefano Stagi, Elisabetta Lapi, Maria Gabriella D’Avanzo, Giancarlo Perferi, Silvia Romano, Sabrina Giglio, Silvia Ricci, Chiara Azzari, Francesco Chiarelli, Salvatore Seminara, Maurizio de Martino

Open Access Research article

Hereditary breast and ovarian cancer: assessment of point mutations and copy number variations in Brazilian patients

Felipe C Silva, Bianca CG Lisboa, Marcia CP Figueiredo, Giovana T Torrezan, Érika MM Santos, Ana C Krepischi, Benedito M Rossi, Maria I Achatz, Dirce M Carraro

Open Access Case report

De novo deletion of chromosome 11q12.3 in monozygotic twins affected by Poland Syndrome

Carlotta Maria Vaccari, Maria Victoria Romanini, Ilaria Musante, Elisa Tassano, Stefania Gimelli, Maria Teresa Divizia, Michele Torre, Carmen Gloria Morovic, Margherita Lerone, Roberto Ravazzolo, Aldamaria Puliti

Open Access Case report

Structural variation and missense mutation in SBDSassociated with Shwachman-Diamond syndrome

Claudia M B Carvalho, Luciana W Zuccherato, Christopher L Williams, Nicholas J Neill, David R Murdock, Matthew Bainbridge, Shalini N Jhangiani, Donna M Muzny, Richard A Gibbs, Wan Ip, Robert Paul Guillerman, James R Lupski, Alison A Bertuch

Open Access Research article

Identification of a genetic variant at 2q12.1 associated with blood pressure in East-Asians by genome-wide scan including gene-environment interactions

Yun Kyoung Kim, Youngdoe Kim, Mi Yeong Hwang, Kazuro Shimokawa, Sungho Won, Norihiro Kato, Yasuharu Tabara, Mitsuhiro Yokota, Bok-Ghee Han, Jong Ho Lee, Bong-Jo Kim

Open Access Research article

A genomic copy number variant analysis implicates the MBD5 and HNRNPUgenes in Chinese children with infantile spasms and expands the clinical spectrum of 2q23.1 deletion

Xiaonan Du, Yu An, Lifei Yu, Renchao Liu, Yanrong Qin, Xiaohong Guo, Daokan Sun, Shuizhen Zhou, Bailin Wu, Yong-hui Jiang, Yi Wang

Open Access Case report

A mutation in the H/ACA box of telomerase RNA component gene (TERC) in a young patient with myelodysplastic syndrome

Yasutaka Ueda, Rodrigo T Calado, Anna Norberg, Sachiko Kajigaya, Göran Roos, Eva Hellstrom-Lindberg, Neal S Young

Open Access Research article

The association of 9p21-3 locus with coronary atherosclerosis: a systematic review and meta-analysis

Muhammad S Munir, Zhen Wang, Fares Alahdab, Mark W Steffen, Patricia J Erwin, Iftikhar J Kullo, Mohammad Hassan Murad

Open Access Research article

Exome sequencing circumvents missing clinical data and identifies a BSCL2 mutation in congenital lipodystrophy

Jens Schuster, Tahir Naeem Khan, Muhammad Tariq, Pakeeza Arzoo Shaiq, Katrin Mäbert, Shahid Mahmood Baig, Joakim Klar

Open Access Case report

Terminal chromosome 4q deletion syndrome in an infant with hearing impairment and moderate syndromic features: review of literature

Barbara Vona, Indrajit Nanda, Cordula Neuner, Jörg Schröder, Vera M Kalscheuer, Wafaa Shehata-Dieler, Thomas Haaf

Open Access Research article

Targeted genetic testing for familial hypercholesterolaemia using next generation sequencing: a population-based study

Penny J Norsworthy, Jana Vandrovcova, Ellen RA Thomas, Archie Campbell, Shona M Kerr, Jennifer Biggs, Laurence Game, Anne K Soutar, Blair H Smith, Anna F Dominiczak, David J Porteous, Andrew D Morris, Generation Scotland, Timothy J Aitman

Open Access Technical advance

Analysis of single-nucleotide polymorphisms (SNPs) in human CYP3A4 and CYP3A5 genes: potential implications for the metabolism of HIV drugs

Giulia Berno, Mauro Zaccarelli, Caterina Gori, Massimo Tempestilli, Andrea Antinori, Carlo Federico Perno, Leopoldo Paolo Pucillo, Roberta D’Arrigo

Open Access Research article

Association study of two inflammation-related polymorphisms with susceptibility to hepatocellular carcinoma: a meta-analysis

Jiajing Liu, Bo Xie, Shuilian Chen, Feng Jiang, Wei Meng

Open Access Research article

Alternative splicing in osteoclasts and Paget’s disease of bone

Roscoe Klinck, Gino Laberge, Martine Bisson, Stephen McManus, Laëtitia Michou, Jacques P Brown, Sophie Roux

Open Access Research article

A novel COL4A1 gene mutation results in autosomal dominant non-syndromic congenital cataract in a Chinese family

Xin-Yi Xia, Na Li, Xiang Cao, Qiu-Yue Wu, Tian-Fu Li, Cui Zhang, Wei-Wei Li, Ying-Xia Cui, Xiao-Jun Li, Chun-Yan Xue

Open Access Research article

Novel GALTvariations and mutation spectrum in the Korean population with decreased galactose-1-phosphate uridyltransferase activity

Rihwa Choi, Kyoung Il Jo, Dae-Hyun Ko, Dong Hwan Lee, Junghan Song, Dong-Kyu Jin, Chang-Seok Ki, Soo-Youn Lee, Jong-Won Kim, Yong-Wha Lee, Hyung-Doo Park

Open Access Research article

Recurrent 8q13.2-13.3 microdeletions associated with Branchio-oto-renal syndrome are mediated by human endogenous retroviral (HERV) sequence blocks

Xiaoli Chen, Jun Wang, Elyse Mitchell, Jin Guo, Liwen Wang, Yu Zhang, Jennelle C Hodge, Yiping Shen

Open Access Case report

Further delineation of Loeys-Dietz syndrome type 4 in a family with mild vascular involvement and a TGFB2 splicing mutation

Marco Ritelli, Nicola Chiarelli, Chiara Dordoni, Stefano Quinzani, Marina Venturini, Roberto Maroldi, Piergiacomo Calzavara-Pinton, Marina Colombi

Open Access Research article

Identification of genes with altered expression in male and female Schlager hypertensive mice

Christine L Chiu, Kristy L Jackson, Nerissa L Hearn, Nicole Steiner, Geoffrey A Head, Joanne M Lind

Open Access Case report

Apparently synonymous substitutions in FGFR2affect splicing and result in mild Crouzon syndrome

Aimee L Fenwick, Jacqueline AC Goos, Julia Rankin, Helen Lord, Tracy Lester, A Jeannette M Hoogeboom, Ans MW van den Ouweland, Steven A Wall, Irene MJ Mathijssen, Andrew OM Wilkie

Open Access Research article

Biotinidase deficiency: clinical and genetic studies of 38 Brazilian patients

Taciane Borsatto, Fernanda Sperb-Ludwig, Louise LC Pinto, Gisele R De Luca, Francisca L Carvalho, Carolina FM De Souza, Paula FV De Medeiros, Charles M Lourenço, Reinaldo LO Filho, Eurico C Neto, Pricila Bernardi, Sandra Leistner-Segal, Ida VD Schwartz

Open Access Research article

The relationship between diastolic blood pressure and coronary artery calcification is dependent on single nucleotide polymorphisms on chromosome 9p21.3

Daniel S Kim, Jennifer A Smith, Lawrence F Bielak, Chun-Yi Wu, Yan V Sun, Patrick F Sheedy, Stephen T Turner, Patricia A Peyser, Sharon LR Kardia

Open Access Research Article

Genetic determinants of glucose-6-phosphate dehydrogenase activity in Kenya

Shivang S Shah, Alex Macharia, Johnstone Makale, Sophie Uyoga, Katja Kivinen, Rachel Craik, Christina Hubbart, Thomas E Wellems, Kirk A Rockett, Dominic P Kwiatkowski, Thomas N Williams

Open Access Research article

Exome sequencing identifies a mutation in the ACTN2 gene in a family with idiopathic ventricular fibrillation, left ventricular noncompaction, and sudden death

Richard D Bagnall, Laura K Molloy, Jonathan M Kalman, Christopher Semsarian

Open Access Research article

Exome sequencing identifies mutations in ABCD1 and DACH2in two brothers with a distinct phenotype

Yanliang Zhang, Yanhui Liu, Ya Li, Yong Duan, Keyun Zhang, Junwang Wang, Yong Dai

Open Access Research article

CYP1B1 mutations in patients with primary congenital glaucoma from Saudi Arabia

Osama M Badeeb, Shazia Micheal, Robert K Koenekoop, Anneke I den Hollander, Manal T Hedrawi

Open Access Research article

Increased methylation at differentially methylated region of GNASin infants born to gestational diabetes

Danqing Chen, Aiping Zhang, Min Fang, Rong Fang, Jiamei Ge, Yuan Jiang, Hong Zhang, Cong Han, Xiaoqun Ye, Hefeng Huang, Yun Liu, Minyue Dong

Open Access Research article

Genetic polymorphisms at SIRT1 and FOXO1 are associated with carotid atherosclerosis in the SAPHIR cohort

Lyudmyla Kedenko, Claudia Lamina, Igor Kedenko, Barbara Kollerits, Tobias Kiesslich, Bernhard Iglseder, Florian Kronenberg, Bernhard Paulweber

Open Access Technical advance

Detection of allele specific differences in IFNL3 (IL28B)mRNA expression

Susanne Knapp, Naeem Meghjee, Sorcha Cassidy, Khaleel Jamil, Mark Thursz

Open Access Research article

A comprehensive evaluation of the role of genetic variation in follicular lymphoma survival

Fredrik Baecklund, Jia-Nee Foo, Paige Bracci, Hatef Darabi, Robert Karlsson, Henrik Hjalgrim, Richard Rosenquist, Hans-Olov Adami, Bengt Glimelius, Mads Melbye, Lucia Conde, Jianjun Liu, Keith Humphreys, Christine F Skibola, Karin E Smedby

Open Access Research article

Replication and exploratory analysis of 24 candidate risk polymorphisms for neural tube defects

Faith Pangilinan, Anne M Molloy, James L Mills, James F Troendle, Anne Parle-McDermott, Denise M Kay, Marilyn L Browne, Emily C McGrath, Hatice Ozel Abaan, Marie Sutton, Peadar N Kirke, Michele Caggana, Barry Shane, John M Scott, Lawrence C Brody

Open Access Research article

Paraganglioma and pheochromocytoma upon maternal transmission of SDHDmutations

Jean-Pierre Bayley, Rogier A Oldenburg, Jennifer Nuk, Attje S Hoekstra, Conny A van der Meer, Esther Korpershoek, Barbara McGillivray, Eleonora PM Corssmit, Winand NM Dinjens, Ronald R de Krijger, Peter Devilee, Jeroen C Jansen, Frederik J Hes

Open Access Case report

A novel single base pair duplication in WDR62 causes primary microcephaly

Verena Rupp, Sobiah Rauf, Ishrat Naveed, Christian Windpassinger, Asif Mir

Open Access Research article

Mapping the deletion endpoints in individuals with 22q11.2 Deletion Syndrome by droplet digital PCR

Vicki J Hwang, Dianna Maar, John Regan, Kathleen Angkustsiri, Tony J Simon, Flora Tassone

Open Access Research article

MiR-146a rs2910164 G/C polymorphism and gastric cancer susceptibility: a meta-analysis

Zhong Xu, Lingling Zhang, Hui Cao, Banjun Bai

Open Access Research article

Genome-wide linkage and exome analyses identify variants of HMCN1for splenic epidermoid cyst

Waleed H Omer, Akira Narita, Kazuyoshi Hosomichi, Shigeki Mitsunaga, Yasuhiro Hayashi, Atsushi Yamashita, Avdyl Krasniqi, Yuri Iwasaki, Masami Kimura, Ituro Inoue

Open Access Research article

Genetic characterization of Spinocerebellar ataxia 1 in a South Indian cohort

Dhanya Kumaran, Krishnan Balagopal, Reginald George Alex Tharmaraj, Sanjith Aaron, Kuryan George, Jayaprakash Muliyil, Ajith Sivadasan, Sumita Danda, Mathew Alexander, Gaiti Hasan

Open Access Research article

Fragile X protein in newborn dried blood spots

Tatyana Adayev, Giuseppe LaFauci, Carl Dobkin, Michele Caggana, Veronica Wiley, Michael Field, Tiffany Wotton, Richard Kascsak, Sarah L Nolin, Anne Glicksman, Nicole Hosmer, W Ted Brown

Open Access Research article

Familial imbalance in 16p13.11 leads to a dosage compensation rearrangement in an unaffected carrier

Alicia Delicado, Luis Fernández, María Luisa de Torres, Julián Nevado, Fe Amalia García-Santiago, Roberto Rodríguez, Elena Mansilla, María Palomares, Fernando Santos-Simarro, Elena Vallespín, María Ángeles Mori, Pablo Lapunzina

Open Access Research article

A study of genes encoding cytokines (IL6, IL10, TNF), cytokine receptors (IL6R, IL6ST), and glucocorticoid receptor (NR3C1) and susceptibility to bronchopulmonary dysplasia

Johanna M Huusko, Minna K Karjalainen, Mari Mahlman, Ritva Haataja, M Anneli Kari, Sture Andersson, Gergely Toldi, Outi Tammela, Mika Rämet, Pascal M Lavoie, Mikko Hallman

Open Access Research article

Left ventricular diastolic function associated with common genetic variation in ATP12Ain a general population

Judita Knez, Erika Salvi, Valérie Tikhonoff, Katarzyna Stolarz-Skrzypek, Andrew Ryabikov, Lutgarde Thijs, Daniele Braga, Malgorzata Kloch-Badelek, Sofia Malyutina, Edoardo Casiglia, Danuta Czarnecka, Kalina Kawecka-Jaszcz, Daniele Cusi, Tim Nawrot, Jan A Staessen, Tatiana Kuznetsova

Open Access Case report

Arterial Tortuosity Syndrome: homozygosity for two novel and one recurrent SLC2A10missense mutations in three families with severe cardiopulmonary complications in infancy and a literature review

Marco Ritelli, Nicola Chiarelli, Chiara Dordoni, Elena Reffo, Marina Venturini, Stefano Quinzani, Matteo Della Monica, Gioacchino Scarano, Giuseppe Santoro, Maria Giovanna Russo, Piergiacomo Calzavara-Pinton, Ornella Milanesi, Marina Colombi

Open Access Research article

The association of polymorphisms of TLR4 and CD14genes with susceptibility to sepsis in a Chinese population

Haiyan Wang, Yesheng Wei, Yi Zeng, Yueqiu Qin, Bin Xiong, Gang Qin, Jun Li, Donghai Hu, Xiaowen Qiu, Suren R Sooranna, Liao Pinhu

Open Access Erratum

Erratum to: high-resolution SNP array analysis of patients with developmental disorder and normal array CGH result

Linda Siggberg, Sirpa Ala-Mello, Tarja Linnankivi, Kristiina Avela, Ilari Scheinin, Kati Kristiansson, Päivi Lahermo, Marja Hietala, Liisa Metsähonkala, Esa Kuusinen, Maarit Laaksonen, Janna Saarela, Sakari Knuutila

Open Access Case report

Cryptic FMR1 mosaic deletion in a phenotypically normal mother of a boy with fragile X syndrome: case report

Shiyu Luo, Wen Huang, Qiuping Xia, Yan Xia, Qian Du, Lingqian Wu, Ranhui Duan

Open Access Research article

Meta-analysis of Hsa-mir-499 polymorphism (rs3746444) for cancer risk: evidence from 31 case-control studies

Chen Chen, Shenglan Yang, Sandip Chaugai, Yan Wang, Dao Wen Wang

Open Access Research article

Expanded spectrum of exon 33 and 34 mutations in SRCAP and follow-up in patients with Floating-Harbor syndrome

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Molecular and clinical analyses of 16q24.1 duplications involving FOXF1 identify an evolutionarily unstable large minisatellite

Avinash V Dharmadhikari, Tomasz Gambin, Przemyslaw Szafranski, Wenjian Cao, Frank J Probst, Weihong Jin, Ping Fang, Krzysztof Gogolewski, Anna Gambin, Jaya K George-Abraham, Sailaja Golla, Francoise Boidein, Benedicte Duban-Bedu, Bruno Delobel, Joris Andrieux, Kerstin Becker, Elke Holinski-Feder, Sau Wai Cheung, Pawel Stankiewicz

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Identification of novel PKD1 and PKD2 mutations in Korean patients with autosomal dominant polycystic kidney disease

Rihwa Choi, Hayne Cho Park, Kyunghoon Lee, Myoung-Gun Lee, Jong-Won Kim, Chang-Seok Ki, Young-Hwan Hwang, Curie Ahn

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Complex phenotype with social communication disorder caused by mosaic supernumerary ring chromosome 19p

Caroline Demily, Massimiliano Rossi, Gabrielle Chesnoy-Servanin, Brice Martin, Alice Poisson, Damien Sanlaville, Patrick Edery

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Genetic associations of Nrf2-encoding NFE2L2 variants with Parkinson’s disease – a multicenter study

Malin von Otter, Petra Bergström, Aldo Quattrone, Elvira Valeria De Marco, Grazia Annesi, Peter Söderkvist, Stephanie Bezzina Wettinger, Marek Drozdzik, Monika Bialecka, Hans Nissbrandt, Christine Klein, Michael Nilsson, Ola Hammarsten, Staffan Nilsson, Henrik Zetterberg

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A novel AP4M1 mutation in autosomal recessive cerebral palsy syndrome and clinical expansion of AP-4 deficiency

Muhammad Jameel, Joakim Klar, Muhammad Tariq, Abubakar Moawia, Naveed Altaf Malik, Syeda Seema Waseem, Uzma Abdullah, Tahir Naeem Khan, Raili Raininko, Shahid Mahmood Baig, Niklas Dahl

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A systematic approach to the reporting of medically relevant findings from whole genome sequencing

Heather M McLaughlin, Ozge Ceyhan-Birsoy, Kurt D Christensen, Isaac S Kohane, Joel Krier, William J Lane, Denise Lautenbach, Matthew S Lebo, Kalotina Machini, Calum A MacRae, Danielle R Azzariti, Michael F Murray, Christine E Seidman, Jason L Vassy, Robert C Green, Heidi L Rehm

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Associations between variants on ADIPOQ and ADIPOR1 with colorectal cancer risk: a chinese case-control study and updated meta-analysis

Yiyi Ou, Peizhan Chen, Ziyuan Zhou, Chenglin Li, Jinyi Liu, Kazuo Tajima, Junsheng Guo, Jia Cao, Hui Wang

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Recessive thrombocytopenia likely due to a homozygous pathogenic variant in the FYBgene: case report

Hanan Hamamy, Periklis Makrythanasis, Nasir Al-Allawi, Abdulrahman A Muhsin, Stylianos E Antonarakis

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Mutations in NFKB2and potential genetic heterogeneity in patients with DAVID syndrome, having variable endocrine and immune deficiencies

Thierry Brue, Marie-Hélène Quentien, Konstantin Khetchoumian, Marco Bensa, José-Mario Capo-Chichi, Brigitte Delemer, Aurelio Balsalobre, Christina Nassif, Dimitris T Papadimitriou, Anne Pagnier, Caroline Hasselmann, Lysanne Patry, Jeremy Schwartzentruber, Pierre-François Souchon, Shinobu Takayasu, Alain Enjalbert, Guy Van Vliet, Jacek Majewski, Jacques Drouin, Mark E Samuels

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Clinical and GAA gene mutation analysis in mainland Chinese patients with late-onset Pompe disease: identifying c.2238G > C as the most common mutation

Xiao Liu, Zhaoxia Wang, Weina Jin, He Lv, Wei Zhang, Chengli Que, Yu Huang, Yun Yuan

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Roberta Santos Guilherme, Vera Ayres Meloni, Ana Beatriz Alvarez Perez, Ana Luiza Pilla, Marco Antonio Paula de Ramos, Anelisa Gollo Dantas, Sylvia Satomi Takeno, Leslie Domenici Kulikowski, Maria Isabel Melaragno

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The impact of coronary artery disease risk loci on ischemic heart failure severity and prognosis: association analysis in the COntrolled ROsuvastatin multiNAtional trial in heart failure (CORONA)

Vincent G Haver, Niek Verweij, John Kjekshus, Jayne C Fox, Hans Wedel, John Wikstrand, Wiek H van Gilst, Rudolf A de Boer, Dirk J van Veldhuisen, Pim van der Harst

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Protective variant associated with alcohol dependence in a Mexican American cohort

Trina M Norden-Krichmar, Ian R Gizer, Kirk C Wilhelmsen, Nicholas J Schork, Cindy L Ehlers

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Single nucleotide polymorphisms in DNA repair genes as risk factors associated to prostate cancer progression

Luis Alberto Henríquez-Hernández, Almudena Valenciano, Palmira Foro-Arnalot, María Jesús Álvarez-Cubero, José Manuel Cozar, José Francisco Suárez-Novo, Manel Castells-Esteve, Pablo Fernández-Gonzalo, Belén De-Paula-Carranza, Montse Ferrer, Ferrán Guedea, Gemma Sancho-Pardo, Jordi Craven-Bartle, María José Ortiz-Gordillo, Patricia Cabrera-Roldán, Estefanía Herrera-Ramos, Carlos Rodríguez-Gallego, Juan Ignacio Rodríguez-Melcón, Pedro C Lara

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The chromosome 9p21 variant interacts with vegetable and wine intake to influence the risk of cardiovascular disease: a population based cohort study

George Hindy, Ulrika Ericson, Viktor Hamrefors, Isabel Drake, Elisabet Wirfält, Olle Melander, Marju Orho-Melander

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Molecular characterization of a Chinese family carrying a novel C4329A mutation in mitochondrial tRNAIle and tRNAGlngenes

Yuqi Liu, Yang Li, Jinliao Gao, Chao Zhu, Yunfeng Lan, Jie Yang, Zongbin Li, Minxin Guan, Yundai Chen

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Genetic similarities between tobacco use disorder and related comorbidities: an exploratory study

Sylviane de Viron, Servaas A Morré, Herman Van Oyen, Angela Brand, Sander Ouburg

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Association between genetic polymorphisms of cytochrome P450 2C19 and the risk of cerebral ischemic stroke in Chinese

Shuzhen Gu, Yan Sun, Ruifa Han, Lin Wang, Dongliang Wang, Jizuo Wang, Xin Li

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A novel insertion mutation identified in exon 10 of the MEFV gene associated with Familial Mediterranean Fever

Hasan Dogan, Fatih Akdemir, Sener Tasdemir, Omer Atis, Eda Diyarbakir, Rahsan Yildirim, Mucahit Emet, Mevlit Ikbal

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Genetic analysis of an allergic rhinitis cohort reveals an intercellular epistasis between FAM134B and CD39

Rossella Melchiotti, Kia Joo Puan, Anand Kumar Andiappan, Tuang Yeow Poh, Mireille Starke, Li Zhuang, Kerstin Petsch, Tuck Siong Lai, Fook Tim Chew, Anis Larbi, De Yun Wang, Michael Poidinger, Olaf Rotzschke

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Novel TBX1loss-of-function mutation causes isolated conotruncal heart defects in Chinese patients without 22q11.2 deletion

Yue-Juan Xu, Sun Chen, Jian Zhang, Shao-Hai Fang, Qian-Qian Guo, Jian Wang, Qi-Hua Fu, Fen Li, Rang Xu, Kun Sun

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Five novel mutations in the ADAR1 gene associated with dyschromatosis symmetrica hereditaria

Qi Liu, Zhen Wang, Yuhong Wu, Lihua Cao, Qingzhu Tang, Xuesha Xing, Hongwei Ma, Shifa Zhang, Yang Luo

Open Access Case report

Whole exome sequencing identifies a novel EMDmutation in a Chinese family with dilated cardiomyopathy

Mingqiu Zhang, Jia Chen, Dayong Si, Yu Zheng, Haixu Jiao, Zhaohui Feng, Zhengmao Hu, Ranhui Duan

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Meta-analysis of differentially expressed genes in osteosarcoma based on gene expression data

Zuozhang Yang, Yongbin Chen, Yu Fu, Yihao Yang, Ya Zhang, Yanjin Chen, Dongqi Li

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Copy number variants (CNVs) analysis in a deeply phenotyped cohort of individuals with intellectual disability (ID)

Ying Qiao, Eloi Mercier, Jila Dastan, Jane Hurlburt, Barbara McGillivray, Albert E Chudley, Sandra Farrell, Francois P Bernier, ME Suzanne Lewis, Paul Pavlidis, Evica Rajcan-Separovic

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Role of estrogen related receptor beta (ESRRB) in DFN35B hearing impairment and dental decay

Megan L Weber, Hong-Yuan Hsin, Ersan Kalay, Dana Š Brožková, Takehiko Shimizu, Merve Bayram, Kathleen Deeley, Erika C Küchler, Jessalyn Forella, Timothy D Ruff, Vanessa M Trombetta, Regina C Sencak, Michael Hummel, Jessica Briseño-Ruiz, Shankar K Revu, José M Granjeiro, Leonardo S Antunes, Livia A Antunes, Fernanda V Abreu, Marcelo C Costa, Patricia N Tannure, Mine Koruyucu, Asli Patir, Fernando A Poletta, Juan C Mereb, Eduardo E Castilla, Iêda M Orioli, Mary L Marazita, Hongjiao Ouyang, Thottala Jayaraman, Figen Seymen, Alexandre R Vieira

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CHI3L1polymorphisms associate with asthma in a Taiwanese population

Yishan Tsai, Yingchin Ko, Mingshyan Huang, Mengchih Lin, Chaochien Wu, Chinchou Wang, Yunxuan Chen, Jianing Li, Yuting Tseng, Tsunai Wang

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Spectrum of phenotypic anomalies in four families with deletion of the SHOX enhancer region

Valentina Gatta, Chiara Palka, Valentina Chiavaroli, Sara Franchi, Giovanni Cannataro, Massimo Savastano, Antonio Raffaele Cotroneo, Francesco Chiarelli, Angelika Mohn, Liborio Stuppia

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A novel CISD2 intragenic deletion, optic neuropathy and platelet aggregation defect in Wolfram syndrome type 2

Enza Mozzillo, Maurizio Delvecchio, Massimo Carella, Elvira Grandone, Pietro Palumbo, Alessandro Salina, Concetta Aloi, Pietro Buono, Antonella Izzo, Giuseppe D’Annunzio, Gennaro Vecchione, Ada Orrico, Rita Genesio, Francesca Simonelli, Adriana Franzese

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Array-CGH analysis in Rwandan patients presenting development delay/intellectual disability with multiple congenital anomalies

Annette Uwineza, Jean-Hubert Caberg, Janvier Hitayezu, Anne Cecile Hellin, Mauricette Jamar, Vinciane Dideberg, Emmanuel K Rusingiza, Vincent Bours, Leon Mutesa

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Evidence for synergistic effects of PRNP and ATP7Bmutations in severe neuropsychiatric deterioration

Nauzer Forbes, Susan Goodwin, Kevin Woodward, David G Morgan, Lauren Brady, Michael B Coulthart, Mark A Tarnopolsky

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Next generation sequencing with copy number variant detection expands the phenotypic spectrum of HSD17B4-deficiency

Daniel S Lieber, Steven G Hershman, Nancy G Slate, Sarah E Calvo, Katherine B Sims, Jeremy D Schmahmann, Vamsi K Mootha

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Early onset of Chanarin-Dorfman syndrome with severe liver involvement in a patient with a complex rearrangement of ABHD5 promoter

Sara Missaglia, Eugenia Ribeiro Valadares, Laura Moro, Eleonora Druve Tavares Faguntes, Raquel quintão Roque, Bruno Giardina, Daniela Tavian

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A replication study of GWAS findings in migraine identifies association in a Swedish case–control sample

Caroline Ran, Lisette Graae, Patrik KE Magnusson, Nancy L Pedersen, Lars Olson, Andrea C Belin

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Identification of CDH23 mutations in Korean families with hearing loss by whole-exome sequencing

Hae-Mi Woo, Hong-Joon Park, Mi-Hyun Park, Bo-Young Kim, Joong-Wook Shin, Won Gi Yoo, Soo Kyung Koo

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Exome sequencing helped the fine diagnosis of two siblings afflicted with atypical Timothy syndrome (TS2)

Sebastian Fröhler, Moritz Kieslich, Claudia Langnick, Mirjam Feldkamp, Bernd Opgen-Rhein, Felix Berger, Joachim C Will, Wei Chen

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De Novo variants in the KMT2A (MLL) gene causing atypical Wiedemann-Steiner syndrome in two unrelated individuals identified by clinical exome sequencing

Samuel P Strom, Reymundo Lozano, Hane Lee, Naghmeh Dorrani, John Mann, Patricia F O’Lague, Nicole Mans, Joshua L Deignan, Eric Vilain, Stanley F Nelson, Wayne W Grody, Fabiola Quintero-Rivera

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The effect of homozygous deletion of the BBOX1 and Fibin genes on carnitine level and acyl carnitine profile

Ali Rashidi-Nezhad, Saeed Talebi, Homeira Saebnouri, Seyed Mohammad Akrami, Alexandre Reymond

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Improving family communication after a new genetic diagnosis: a randomised controlled trial of a genetic counselling intervention

Jan M Hodgson, Sylvia A Metcalfe, MaryAnne Aitken, Susan M Donath, Clara L Gaff, Ingrid M Winship, Martin B Delatycki, Loane LC Skene, Belinda J McClaren, Jean L Paul, Jane L Halliday