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01-04-2019 | Annotated Sequence Record

Complete genome sequence of maize sterile stunt virus

Authors: Ralf G. Dietzgen, Colleen M. Higgins

Published in: Archives of Virology | Issue 4/2019

Abstract

Based on serology, cytopathology, cereal host range and leafhopper vector, maize sterile stunt virus (MSSV) has been regarded as a strain of the cytorhabdovirus barley yellow striate mosaic virus (BYSMV). Here, we report the first-ever sequence of MSSV, comprising the complete genome of 12,561 nucleotides. Detailed analysis of genome organization, coding and non-coding sequences, and phylogeny confirms the close relationship to BYSMV and supports classification of this virus a strain of BYSMV.

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Greber RS (1982) Maize sterile stunt—a delphacid transmitted rhabdovirus disease affecting some maize genotypes in Australia. Aust J Agric Res 33:13–23CrossRef

Walker PJ, Blasdell KR, Calisher CH, Dietzgen RG, Kondo H, Kurath G, Longdon B, Stone DM, Tesh RB, Tordo N, Vasilakis N, Whitfield AE (2018) ICTV virus taxonomy profile: Rhabdoviridae. J Gen Virol 99:447–448CrossRefPubMed

Milne RG, Masenga V, Conti M (1986) Serological relationships between the nucleocapsids of some planthopper-borne rhabdoviruses of cereals. Intervirology 25:83–87CrossRefPubMed

Lockhart BEL, El Maataoui M, Carroll TW, Lennon AM, Zaske SK (1986) Identification of barley yellow striate mosaic virus in Morocco and its field detection by enzyme immune assay. Plant Dis 70:1113–1117CrossRef

Greber RS (1990) Discrimination by gel-diffusion serology of digitaria striate, maize sterile stunt and other rhabdoviruses of Poacea. Ann Appl Biol 116:259–264CrossRef

Milne RG, Conti M (1986) Barley yellow striate mosaic virus. In: CMI/AAB descriptions of plant viruses, vol 312. Association of Applied Biologists, Kew, UK

Yan T, Zhu J-R, Di D, Gao Q, Zhang Y, Zhang A, Yan C, Miao H, Wang X-B (2015) Characterization of the complete genome of Barley yellow striate mosaic virus reveals a nested gene encoding a small hydrophobic protein. Virology 478:112–122CrossRefPubMed

Almasi R, Afsharifar A, Niazi A, Pakdel A, Izadpanah K (2010) Analysis of the complete nucleotide sequence of the polymerase gene of Barley yellow striate mosaic virus—Iranian isolate. J Phytopathol 158:351–356CrossRef

Huang X, Madan A (1999) CAP3: a DNA sequence assembly program. Genome Res 9:868–877CrossRefPubMedPubMedCentral

10.

Kumar S, Stecher G, Tamura K (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33:1870–1874CrossRefPubMedPubMedCentral

11.

Le SQ, Gascuel O (2008) An improved general amino acid replacement matrix. Mol Biol Evol 25:1307–1320CrossRefPubMed

12.

Maurino F, Dumón AD, Llauger G, Alemandri V, de Haro LA, Mattio MF, del Vas M, Laguna IG, de la Paz Giménez Pecci M (2018) Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina. Arch Virol 163:291–295CrossRefPubMed

13.

Tanno F, Nakatsu A, Toriyama S, Kojima M (2000) Complete nucleotide sequence of Northern cereal mosaic virus and its genome organization. Arch Virol 145:1373–1384CrossRefPubMed

Title: Complete genome sequence of maize sterile stunt virus
Authors: Ralf G. Dietzgen
Colleen M. Higgins
Publication date: 01-04-2019
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 4/2019
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-019-04164-6

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