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Published in: Archives of Virology 1/2018

01-01-2018 | Annotated Sequence Record

Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina

Authors: Fernanda Maurino, Analía D. Dumón, Gabriela Llauger, Vanina Alemandri, Luis A. de Haro, M. Fernanda Mattio, Mariana del Vas, Irma Graciela Laguna, María de la Paz Giménez Pecci

Published in: Archives of Virology | Issue 1/2018

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Abstract

A rhabdovirus infecting maize and wheat crops in Argentina was molecularly characterized. Through next-generation sequencing (NGS) of symptomatic leaf samples, the complete genome was obtained of two isolates of maize yellow striate virus (MYSV), a putative new rhabdovirus, differing by only 0.4% at the nucleotide level. The MYSV genome consists of 12,654 nucleotides for maize and wheat virus isolates, and shares 71% nucleotide sequence identity with the complete genome of barley yellow striate mosaic virus (BYSMV, NC028244). Ten open reading frames (ORFs) were predicted in the MYSV genome from the antigenomic strand and were compared with their BYSMV counterparts. The highest amino acid sequence identity of the MYSV and BYSMV proteins was 80% between the L proteins, and the lowest was 37% between the proteins 4. Phylogenetic analysis suggested that the MYSV isolates are new members of the genus Cytorhabdovirus, family Rhabdoviridae. Yellow striate, affecting maize and wheat crops in Argentina, is an emergent disease that presents a potential economic risk for these widely distributed crops.
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Metadata
Title
Complete genome sequence of maize yellow striate virus, a new cytorhabdovirus infecting maize and wheat crops in Argentina
Authors
Fernanda Maurino
Analía D. Dumón
Gabriela Llauger
Vanina Alemandri
Luis A. de Haro
M. Fernanda Mattio
Mariana del Vas
Irma Graciela Laguna
María de la Paz Giménez Pecci
Publication date
01-01-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 1/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-017-3579-7

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