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Archives of Virology
Published in: Archives of Virology 11/2015

01-11-2015 | Annotated Sequence Record

The complete nucleotide sequence and genome organization of lychnis mottle virus

Authors: Ran Hee Yoo, Fumei Zhao, Seungmo Lim, Davaajargal Igori, Su-Heon Lee, Jae Sun Moon

Published in: Archives of Virology | Issue 11/2015

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Abstract

The complete genomic sequence of lychnis mottle virus (LycMoV) from a Lychnis cognata plant was determined. LycMoV has a bipartite genome consisting of RNA1 (7,428 nt) and RNA2 (3,734 nt). Species in the family Secoviridae are demarcated based on their amino acid similarities in the protease-polymerase and coat protein. In LycMoV, these proteins share 90 % and 63 % sequence similarity, respectively, with the most closely related virus, strawberry latent ringspot virus, which is a member of the family Secoviridae but has not been assigned to a genus. Therefore, LycMoV is a tentative new virus of the family Secoviridae.
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Literature
1.
Everett KR, Milne KS, Forster RL (1994) Nucleotide sequence of the coat protein genes of strawberry latent ringspot virus: lack of homology to the nepoviruses and comoviruses. J General Virol 75:1821–1825CrossRef
2.
Gubler U, Hoffman BJ (1983) A simple and very efficient method for generating cDNA libraries. Gene 25:263–269CrossRefPubMed
3.
King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (2012) Virus taxonomy: classification and nomenclature of viruses: ninth report of the international committee on taxonomy of viruses. In: International Union of Microbiological Societies—Virology Division. Elsevier Academic Press
4.
Kreiah S, Edwards ML, Hawes WS, Jones AT, Brown DJF, McGavin WJ, Cooper JI (1996) Some coat protein constituents from strawberry latent ringspot virus expressed in transgenic tobacco protect plants against systematic invasion following root inoculation by nematode vectors. Eur J Plant Pathol 102:297–303CrossRef
5.
Le Gall O, Christian P, Fauquet CM, King AM, Knowles NJ, Nakashima N, Stanway G, Gorbalenya AE (2008) Picornavirales, a proposed order of positive-sense single-stranded RNA viruses with a pseudo-T = 3 virion architecture. Archives of virology 153:715–727CrossRefPubMed
6.
Nam M, Kim SM, Domier LL, Koh S, Moon JK, Choi HS, Kim HG, Moon JS, Lee SH (2009) Nucleotide sequence and genomic organization of a newly identified member of the genus Carmovirus, soybean yellow mottle mosaic virus, from soybean. Arch Virol 154:1679–1684CrossRefPubMed
7.
Pemberton RW, Lee NS (1996) Wild food plants in South Korea; market presence, new crops, and exports to the United States. Econ Bot 50:57–70CrossRef
8.
Sanfacon H, Wellink J, Le Gall O, Karasev A, van der Vlugt R, Wetzel T (2009) Secoviridae: a proposed family of plant viruses within the order Picornavirales that combines the families Sequiviridae and Comoviridae, the unassigned genera Cheravirus and Sadwavirus, and the proposed genus Torradovirus. Arch Virol 154:899–907CrossRefPubMed
9.
Savenkov EI, Solovyev AG, Morozov S (1998) Genome sequences of poa semilatent and lychnis ringspot hordeiviruses. Arch Virol 143:1379–1393CrossRefPubMed
10.
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mole Biol Evol 30:2725–2729CrossRef
11.
Tzanetakis IE, Postman JD, Gergerich RC, Martin RR (2006) A virus between families: nucleotide sequence and evolution of Strawberry latent ringspot virus. Virus Res 121:199–204CrossRefPubMed
Metadata
Title
The complete nucleotide sequence and genome organization of lychnis mottle virus
Authors
Ran Hee Yoo
Fumei Zhao
Seungmo Lim
Davaajargal Igori
Su-Heon Lee
Jae Sun Moon
Publication date
01-11-2015
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 11/2015
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-015-2501-4

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