Skip to main content
Key Specialties
Cardiology Diabetology Endocrinology Gastroenterology Geriatrics and Gerontology Gynecology and Obstetrics Hematology Infectious Disease Internal Medicine Nephrology Neurology Oncology Pediatrics Respiratory Medicine Rheumatology Surgery
Congress Coverage
2024 ACC Congress 2023 ESMO Congress 2023 EASD Congress 2023 ERS Congress 2023 ESC Congress
Clinical Collections
Advances in Alzheimer’s

Keynote webinar | Spotlight on medication adherence

LIVE: Thursday 27th June 2024, 18:00-19:30 (CEST)
Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.
ADVANCED SEARCH
Log in
Top
Archives of Virology
Published in: Archives of Virology 11/2015

01-11-2015 | Annotated Sequence Record

Nucleotide sequence and genome organization of atractylodes mottle virus, a new member of the genus Carlavirus

Authors: Fumei Zhao, Davaajargal Igori, Seungmo Lim, Ran Hee Yoo, Su-Heon Lee, Jae Sun Moon

Published in: Archives of Virology | Issue 11/2015

Login to get access

Abstract

The complete genome sequence of a member of a distinct species of the genus Carlavirus in the family Betaflexiviridae, tentatively named atractylodes mottle virus (AtrMoV), has been determined. Analysis of its genomic organization indicates that it has a single-stranded, positive-sense genomic RNA of 8866 nucleotides, excluding the poly(A) tail, and consists of six open reading frames typical of members of the genus Carlavirus. The individual open reading frames of AtrMoV show moderately low sequence similarity to those of other carlaviruses at the nucleotide and amino acid sequence levels. Pairwise comparison and phylogenetic analysis suggest that AtrMoV is most closely related to chrysanthemum virus B.
Appendix
Available only for authorised users
Literature
1.
Adams MJ, Antoniw JF, Bar-Joseph M, Brunt AA, Candresse T, Foster GD, Martelli GP, Milne RG, Fauquet CM (2004) The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Arch Virol 149:1045–1060PubMed
2.
Kim SH, Jung HN, Lee KY, Kim J, Lee JC, Jang YS (2005) Suppression of Th2-type immune response-mediated allergic diarrhea following oral administration of traditional Korean medicine: Atractylodes macrocephala Koidz. Immunopharmacol Immunotoxicol 27:331–343CrossRefPubMed
3.
Kim CK, Kim M, Oh SD, Lee SM, Sun B, Choi GS, Kim SK, Bae H, Kang C, Min BI (2011) Effects of Atractylodes macrocephala Koidzumi rhizome on 3T3-L1 adipogenesis and an animal model of obesity. J Ethnopharmacol 137:396–402CrossRefPubMed
4.
Li CQ, He LC, Dong HY, Jin JQ (2007) Screening for the anti-inflammatory activity of fractions and compounds from Atractylodes macrocephala koidz. J Ethnopharmacol 114:212–217CrossRefPubMed
5.
Li X, Lin J, Han W, Mai W, Wang L, Li Q, Lin M, Bai M, Zhang L, Chen D (2012) Antioxidant ability and mechanism of rhizoma Atractylodes macrocephala. Molecules 17:13457–13472CrossRefPubMed
6.
Morozov SY, Solovyev AG (2003) Triple gene block: modular design of a multifunctional machine for plant virus movement. J Gen Virol 84:1351–1366CrossRefPubMed
7.
Nam M, Kim SM, Domier LL, Koh S, Moon JK, Choi HS, Kim HG, Moon JS, Lee SH (2009) Nucleotide sequence and genomic organization of a newly identified member of the genus Carmovirus, soybean yellow mottle mosaic virus, from soybean. Arch Virol 154:1679–1684CrossRefPubMed
8.
Niu YB, Shi XL, Zhao HQ, Zhang XM, Zhao BJ (2014) Molecular identification and partial sequence analysis of a Cucumber mosaic virus isolate from Atractylodes macrocephala Koidz (in Chinese). Acta Phytopathol Sin 44:357–362
9.
Singh L, Hallan V, Jabeen N, Singh AK, Ram R, Martin DP, Zaidi AA (2007) Coat protein gene diversity among Chrysanthemum virus B isolates from India. Arch Virol 152:405–413CrossRefPubMed
10.
11.
Tan G, Yang Z, Yuan Z, Zhang S (2013) Morphological, molecular and pathogenic characterization of Alternaria longipes, the fungal pathogen causing leaf spot on Atractylodes macrocephala. Afr J Microbiol Res 7:2589–2595
Metadata
Title
Nucleotide sequence and genome organization of atractylodes mottle virus, a new member of the genus Carlavirus
Authors
Fumei Zhao
Davaajargal Igori
Seungmo Lim
Ran Hee Yoo
Su-Heon Lee
Jae Sun Moon
Publication date
01-11-2015
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 11/2015
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-015-2553-5

Other articles of this Issue 11/2015

Archives of Virology 11/2015 Go to the issue

Original Article

Genotyping of turkey coronavirus field isolates from various geographic locations in the Unites States based on the spike gene

Annotated Sequence Record

Tomato chlorotic mottle Guyane virus: a novel tomato-infecting bipartite begomovirus from French Guiana

Original Article

Horizontal study of vaccinia virus infections in an endemic area: epidemiologic, phylogenetic and economic aspects

Annotated Sequence Record

The complete nucleotide sequence and genome organization of lychnis mottle virus

Erratum

Erratum to: Novel method for genotyping clinical herpes simplex virus type 1 isolates

Original Article

Identification and molecular characterization of a novel duck Tembusu virus isolate from Southwest China
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Reserve your place

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

Read more

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Pediatric Cardiology Video

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

Cardiopulmonary Comorbidity Video

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Valvular Heart Disease Video

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.

ACC 2024 Congress Coverage

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.

Watch now

Semaglutide benefits people with type 2 diabetes and obesity-related heart failure

16-04-2024 Type 2 Diabetes News

Incentivised to exercise

11-04-2024 Lifestyle Modifications News

New intervention for STEMI-related cardiogenic shock

10-04-2024 Myocardial Infarction News

» View more highlights on the ACC 2024 congress hub page

Image Credits