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Published in: Current Fungal Infection Reports 4/2019

01-12-2019 | Primary Immunodeficiency | Pediatric Fungal Infections (D Corzo-Leon, Section Editor)

From Culture to Fungal Biomarkers: the Diagnostic Route of Fungal Infections in Children with Primary Immunodeficiencies

Authors: Catherine Mark, Claire McGinn

Published in: Current Fungal Infection Reports | Issue 4/2019

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Abstract

Purpose of Review

To provide an overview of the diagnostic tests available to identify invasive fungal disease (IFD) in children with a primary immunodeficiency and to evaluate the relative strengths and weaknesses of those tests.

Recent Findings

Novel tools to aid the diagnosis of IFD, such as fungal PCRs and lateral flow devices (for Aspergillus spp.), are emerging. However, the paucity of high-quality, multicentre clinical trials evaluating the performance of these diagnostic tools, particularly in the paediatric cohort of interest, remains a challenge. Children with primary immunodeficiencies are seldom referenced in existing studies.

Summary

It is difficult to provide recommendations for the majority of fungal diagnostic tests, with the exception of histopathology, microscopy, culture, and imaging modalities, due to their poorly studied and largely unvalidated nature. Moving forward, multicentre trials considering the role of these tools in the investigation of children with probable IFD and a primary immunodeficiency are strongly encouraged.
Literature
10.
go back to reference • De Pauw B, Walsh TJ, Donnelly JP, Stevens DA, Edwards JE, Calandra T, et al. Revised definitions of invasive fungal disease from the European Organization for Research and Treatment of cancer/invasive fungal infections cooperative group and the National Institute of Allergy and Infectious Diseases mycoses study group (EORTC/MSG) consensus group. Clinical Infectious Diseases. 2008;46:1813–21. https://doi.org/10.1086/588660Provides the reader with clear definitions, and guidelines for the diagnosis of, possible, probable and proven IFD.CrossRefPubMedPubMedCentral • De Pauw B, Walsh TJ, Donnelly JP, Stevens DA, Edwards JE, Calandra T, et al. Revised definitions of invasive fungal disease from the European Organization for Research and Treatment of cancer/invasive fungal infections cooperative group and the National Institute of Allergy and Infectious Diseases mycoses study group (EORTC/MSG) consensus group. Clinical Infectious Diseases. 2008;46:1813–21. https://​doi.​org/​10.​1086/​588660Provides the reader with clear definitions, and guidelines for the diagnosis of, possible, probable and proven IFD.CrossRefPubMedPubMedCentral
12.
go back to reference •• Ullmann AJ, Aguado JM, Arikan-Akdagli S, Denning DW, Groll AH, Lagrou K, et al. Diagnosis and management of Aspergillus diseases: executive summary of the 2017 ESCMID-ECMM-ERS guideline. Clinical Microbiology and Infection. 2018;24:e1–e38. https://doi.org/10.1016/j.cmi.2018.01.002Useful overview of the investigative work-up for patients with suspected IPA.CrossRefPubMed •• Ullmann AJ, Aguado JM, Arikan-Akdagli S, Denning DW, Groll AH, Lagrou K, et al. Diagnosis and management of Aspergillus diseases: executive summary of the 2017 ESCMID-ECMM-ERS guideline. Clinical Microbiology and Infection. 2018;24:e1–e38. https://​doi.​org/​10.​1016/​j.​cmi.​2018.​01.​002Useful overview of the investigative work-up for patients with suspected IPA.CrossRefPubMed
13.
go back to reference Rüchel R, Schaffrinski M. Versatile fluorescent staining of fungi in clinical specimens by using the optical brightener blankophor. Journal of Clinical Microbiology. 1999;37:2694–6.PubMedPubMedCentral Rüchel R, Schaffrinski M. Versatile fluorescent staining of fungi in clinical specimens by using the optical brightener blankophor. Journal of Clinical Microbiology. 1999;37:2694–6.PubMedPubMedCentral
15.
go back to reference •Cuenca-Estrella M, Verweij PE, Arendrup MC, Arikan-Akdagli S, Bille J, Donnelly JP, et al. ESCMID* guideline for the diagnosis and management of Candida diseases 2012: diagnostic procedures. Clinical Microbiology and Infection 2012:18(S7):9–18. Doi: https://doi.org/10.1111/1469-0691.12038. Useful inclusion of recommendations for paediatric patients. CrossRefPubMed •Cuenca-Estrella M, Verweij PE, Arendrup MC, Arikan-Akdagli S, Bille J, Donnelly JP, et al. ESCMID* guideline for the diagnosis and management of Candida diseases 2012: diagnostic procedures. Clinical Microbiology and Infection 2012:18(S7):9–18. Doi: https://​doi.​org/​10.​1111/​1469-0691.​12038. Useful inclusion of recommendations for paediatric patients. CrossRefPubMed
20.
go back to reference • Fujita Y, Ishiwada N, Takei H, Suwabe SI, Yarita K, Ohkusu M, et al. Usefulness of Gastric Aspirate Culture for Diagnosing Congenital Immunodeficiency in an Infant with Fungal Pneumonia Caused by Rasamsonia piperina. The Tohoku Journal of Experimental Medicine. 2019;247(4):265–9. https://doi.org/10.1620/tjem.247.265Authors present a novel means of obtaining tissue for fungal culture, of interest given the challenges this can provide in paediatric practice.CrossRefPubMed • Fujita Y, Ishiwada N, Takei H, Suwabe SI, Yarita K, Ohkusu M, et al. Usefulness of Gastric Aspirate Culture for Diagnosing Congenital Immunodeficiency in an Infant with Fungal Pneumonia Caused by Rasamsonia piperina. The Tohoku Journal of Experimental Medicine. 2019;247(4):265–9. https://​doi.​org/​10.​1620/​tjem.​247.​265Authors present a novel means of obtaining tissue for fungal culture, of interest given the challenges this can provide in paediatric practice.CrossRefPubMed
22.
go back to reference Maschmeyer G, Carratala J, Buchheidt D, Hamprecht A, Heussel CP, Kahl C, et al. Diagnosis and antimicrobial therapy of lung infiltrates in febrile neutropenic patients (allogeneic SCT excluded): updated guidelines of the infectious diseases working party (AGIHO) of the German Society of Hematology and Medical Oncology (DGHO). Annals of Oncology. 2015;26:21–33. https://doi.org/10.1093/annonc/mdu192.CrossRefPubMed Maschmeyer G, Carratala J, Buchheidt D, Hamprecht A, Heussel CP, Kahl C, et al. Diagnosis and antimicrobial therapy of lung infiltrates in febrile neutropenic patients (allogeneic SCT excluded): updated guidelines of the infectious diseases working party (AGIHO) of the German Society of Hematology and Medical Oncology (DGHO). Annals of Oncology. 2015;26:21–33. https://​doi.​org/​10.​1093/​annonc/​mdu192.CrossRefPubMed
23.
30.
go back to reference • De Ravin SS, Parta M, Sutton DA, Wickes BL, Thompson EH, Wiederhold NP, et al. Paravertebral mushroom: identification of a novel species of Phellinus as a human pathogen in chronic granulomatous disease. Journal of Clinical Microbiology. 2014;52:2726–9. https://doi.org/10.1128/JCM.00667-14Important reminder that growth of indolent organisms can be encouraged by prophylactic prescription.CrossRefPubMedPubMedCentral • De Ravin SS, Parta M, Sutton DA, Wickes BL, Thompson EH, Wiederhold NP, et al. Paravertebral mushroom: identification of a novel species of Phellinus as a human pathogen in chronic granulomatous disease. Journal of Clinical Microbiology. 2014;52:2726–9. https://​doi.​org/​10.​1128/​JCM.​00667-14Important reminder that growth of indolent organisms can be encouraged by prophylactic prescription.CrossRefPubMedPubMedCentral
32.
go back to reference •• Hope WW, Castagnola E, Groll AH, Roilides E, Akova M, Arendrup MC, et al. ESCMID* guideline for the diagnosis and management of Candida diseases 2012: prevention and management of invasive infections in neonates and children caused by Candida spp. Clinical Microbiology and Infection. 2012;18:38–52. https://doi.org/10.1111/1469-0691.12040Guideline for the management of candidiasis, specifically in children.CrossRefPubMed •• Hope WW, Castagnola E, Groll AH, Roilides E, Akova M, Arendrup MC, et al. ESCMID* guideline for the diagnosis and management of Candida diseases 2012: prevention and management of invasive infections in neonates and children caused by Candida spp. Clinical Microbiology and Infection. 2012;18:38–52. https://​doi.​org/​10.​1111/​1469-0691.​12040Guideline for the management of candidiasis, specifically in children.CrossRefPubMed
33.
go back to reference • Groll AH, Castagnola E, Cesaro S, Dalle JH, Engelhard D, Hope W, et al. Fourth European Conference on Infections in Leukaemia(ECIL-4): guidelines for diagnosis, prevention, and treatment of invasive fungal diseases in paediatric patients with cancer or allogeneic haemopoietic stem-cell transplantation. Lancet Oncology. 2014;15(8):e327–40. https://doi.org/10.1016/S1470-2045(14)70017-8Although largely pertaining to management of paediatric haemoncology patients, this paper provides an excellent overview of fungal diagnostic tools and was the first guideline devised for children with cancer and an IFD.CrossRefPubMed • Groll AH, Castagnola E, Cesaro S, Dalle JH, Engelhard D, Hope W, et al. Fourth European Conference on Infections in Leukaemia(ECIL-4): guidelines for diagnosis, prevention, and treatment of invasive fungal diseases in paediatric patients with cancer or allogeneic haemopoietic stem-cell transplantation. Lancet Oncology. 2014;15(8):e327–40. https://​doi.​org/​10.​1016/​S1470-2045(14)70017-8Although largely pertaining to management of paediatric haemoncology patients, this paper provides an excellent overview of fungal diagnostic tools and was the first guideline devised for children with cancer and an IFD.CrossRefPubMed
34.
go back to reference • Huppler AR, Fisher BT, Lehrnbecher T, Walsh TJ, Steinbach WJ. Role of Molecular Biomarkers in the Diagnosis of Invasive Fungal Diseases in Children. Journal of the Pediatric Infectious Disease Society. 2017;6(1):32–44. https://doi.org/10.1093/jpids/pix054Excellent overview of fungal biomarkers and their role in the diagnosis of IFD.CrossRef • Huppler AR, Fisher BT, Lehrnbecher T, Walsh TJ, Steinbach WJ. Role of Molecular Biomarkers in the Diagnosis of Invasive Fungal Diseases in Children. Journal of the Pediatric Infectious Disease Society. 2017;6(1):32–44. https://​doi.​org/​10.​1093/​jpids/​pix054Excellent overview of fungal biomarkers and their role in the diagnosis of IFD.CrossRef
38.
41.
42.
go back to reference •• Calitri C, Caviglia I, Cangemi G, Furfaro E, Bandettini R, Fioredda F, et al. Performance of 1,3-β-D-glucan for diagnosing invasive fungal diseases in children. Mycoses. 2017;60(12):789–95. https://doi.org/10.1111/myc.12664Interesting study that questions the performance of 1,3-β-D-glucan in the paediatric cohort.CrossRefPubMed •• Calitri C, Caviglia I, Cangemi G, Furfaro E, Bandettini R, Fioredda F, et al. Performance of 1,3-β-D-glucan for diagnosing invasive fungal diseases in children. Mycoses. 2017;60(12):789–95. https://​doi.​org/​10.​1111/​myc.​12664Interesting study that questions the performance of 1,3-β-D-glucan in the paediatric cohort.CrossRefPubMed
43.
go back to reference • Salvatore CM, Petraitiene R, Sitaras L, Hammad H, Leimena P, Toussi S, et al. Prospective study and analytical performance of serum (1->3)-β-d-glucan in pediatric patients. New Orleans, LA: Program and Abstracts of ID Week. Open Forum Infectious Diseases. 2016;3(1):1570. https://doi.org/10.1093/ofid/ofw172.1270Further explores the utility of 1,3-β-D-glucan in paediatric practice.CrossRef • Salvatore CM, Petraitiene R, Sitaras L, Hammad H, Leimena P, Toussi S, et al. Prospective study and analytical performance of serum (1->3)-β-d-glucan in pediatric patients. New Orleans, LA: Program and Abstracts of ID Week. Open Forum Infectious Diseases. 2016;3(1):1570. https://​doi.​org/​10.​1093/​ofid/​ofw172.​1270Further explores the utility of 1,3-β-D-glucan in paediatric practice.CrossRef
44.
go back to reference Naselli A, Faraci M, Lanino E, Morreale G, Cangemi G, Bandettini R, et al. Persistence of high-level (1,3)-β-d-glucan after candidemia following autologous peripheral SCT in a pediatric patient. Bone Marrow Transplant. 2015;50:137–8.CrossRef Naselli A, Faraci M, Lanino E, Morreale G, Cangemi G, Bandettini R, et al. Persistence of high-level (1,3)-β-d-glucan after candidemia following autologous peripheral SCT in a pediatric patient. Bone Marrow Transplant. 2015;50:137–8.CrossRef
47.
go back to reference • Henriet S, Verweij PE, Holland SM, Warris A. Invasive fungal infections in patients with chronic granulomatous disease. Advances in Experimental Medicine and Biology. 2013;764:27–55. https://doi.org/10.1007/978-1-4614-4726-9_3Particular focus on CGD: a disease process which has taught much about IFD and the relative merits of the available diagnostic tests.CrossRefPubMed • Henriet S, Verweij PE, Holland SM, Warris A. Invasive fungal infections in patients with chronic granulomatous disease. Advances in Experimental Medicine and Biology. 2013;764:27–55. https://​doi.​org/​10.​1007/​978-1-4614-4726-9_​3Particular focus on CGD: a disease process which has taught much about IFD and the relative merits of the available diagnostic tests.CrossRefPubMed
48.
go back to reference Walsh TJ, Schaufele RL, Sein T. Gea-Banacloche J, Bishop M, Young N, et al. Reduced expression of galactomannan antigenemia in patients with invasive aspergillosis and chronic granulomatous disease or Job’s syndrome. Program and Abstracts of the 40th Annual Meeting of the Infectious Diseases Society of America; 24–27 October 2002; Chicago, IL. Walsh TJ, Schaufele RL, Sein T. Gea-Banacloche J, Bishop M, Young N, et al. Reduced expression of galactomannan antigenemia in patients with invasive aspergillosis and chronic granulomatous disease or Job’s syndrome. Program and Abstracts of the 40th Annual Meeting of the Infectious Diseases Society of America; 24–27 October 2002; Chicago, IL.
50.
go back to reference •• Warris A, Lehrnbecher T, Roilides E, Castagnola E, Bruggemann RJM, Groll AH. Escmid-ecmm guideline: diagnosis and management of invasive aspergillosis in neonates and children. Clinical Microbiology and Infection. 2019. https://doi.org/10.1016/j.cmi.2019.05.019One of the key paediatric guidelines directing management of children with IA.CrossRef •• Warris A, Lehrnbecher T, Roilides E, Castagnola E, Bruggemann RJM, Groll AH. Escmid-ecmm guideline: diagnosis and management of invasive aspergillosis in neonates and children. Clinical Microbiology and Infection. 2019. https://​doi.​org/​10.​1016/​j.​cmi.​2019.​05.​019One of the key paediatric guidelines directing management of children with IA.CrossRef
52.
go back to reference Duarte R, Sánchez-Ortega I, Cuesta I, Arnan M, Patiño B, Fernández de Sevilla A, et al. Serum galactomannan–based early detection of invasive Aspergillosis in hematology patients receiving effective anti-mold prophylaxis. Clinical Infectious Diseases. 2014;59(12):1696–702. https://doi.org/10.1093/cid/ciu673.CrossRefPubMed Duarte R, Sánchez-Ortega I, Cuesta I, Arnan M, Patiño B, Fernández de Sevilla A, et al. Serum galactomannan–based early detection of invasive Aspergillosis in hematology patients receiving effective anti-mold prophylaxis. Clinical Infectious Diseases. 2014;59(12):1696–702. https://​doi.​org/​10.​1093/​cid/​ciu673.CrossRefPubMed
54.
56.
58.
59.
go back to reference Mikulska M, Calandra T, Sanguinetti M, Poulain D, Viscoli C. Third European Conference on Infections in Leukemia Group. The use of mannan antigen and anti-mannan antibodies in the diagnosis of invasive candidiasis: recommendations from the Third European Conference on Infections in Leukemia. Critical Care. 2010;14(6):222. https://doi.org/10.1186/cc9365.CrossRef Mikulska M, Calandra T, Sanguinetti M, Poulain D, Viscoli C. Third European Conference on Infections in Leukemia Group. The use of mannan antigen and anti-mannan antibodies in the diagnosis of invasive candidiasis: recommendations from the Third European Conference on Infections in Leukemia. Critical Care. 2010;14(6):222. https://​doi.​org/​10.​1186/​cc9365.CrossRef
64.
go back to reference • Boch T, Spiess B, Vehreschild JJ, Rath PM, Steinmann J, Heinz WJ, et al. Diagnosis of invasive fungal infections in haematological patients by combined use of galactomannan, 1,3-β-D-glucan, Aspergillus PCR, multifungal DNA-microarray, and Aspergillus azole resistance PCRs in blood and bronchoalveolar lavage samples: results of a prospective multicentre study. Clinical Microbiology and Infection. 2016;22(10):862–8. https://doi.org/10.1016/j.cmi.2016.06.021Interesting data: BAL vs serum testing.CrossRefPubMed • Boch T, Spiess B, Vehreschild JJ, Rath PM, Steinmann J, Heinz WJ, et al. Diagnosis of invasive fungal infections in haematological patients by combined use of galactomannan, 1,3-β-D-glucan, Aspergillus PCR, multifungal DNA-microarray, and Aspergillus azole resistance PCRs in blood and bronchoalveolar lavage samples: results of a prospective multicentre study. Clinical Microbiology and Infection. 2016;22(10):862–8. https://​doi.​org/​10.​1016/​j.​cmi.​2016.​06.​021Interesting data: BAL vs serum testing.CrossRefPubMed
65.
go back to reference Reinwald M, Konietzka CA, Kolve H, Uhlenbrock S, Ahike E, Hummel M, et al. Assessment of Aspergillus-specific PCR as a screening method for invasive aspergillosis in paediatric cancer patients and allogeneic haematopoietic stem cell recipients with suspected infections. Mycoses. 2014;57:537–43. https://doi.org/10.1111/myc.12192.CrossRefPubMed Reinwald M, Konietzka CA, Kolve H, Uhlenbrock S, Ahike E, Hummel M, et al. Assessment of Aspergillus-specific PCR as a screening method for invasive aspergillosis in paediatric cancer patients and allogeneic haematopoietic stem cell recipients with suspected infections. Mycoses. 2014;57:537–43. https://​doi.​org/​10.​1111/​myc.​12192.CrossRefPubMed
67.
go back to reference • Vrioni G, Theodoridou K, Tsiamis C, Mavrouli M, Kapsimali V, Rigopoulos D, et al. Use of Galactomannan antigen and Aspergillus DNA real time polymerase chain reaction as routine methods for invasive aspergillosis in immunosuppressed children in Greece. Clinical Therapeutics. 2018;40(6):918–24. https://doi.org/10.1016/j.clinthera.2018.05.002Supportive evidence for combining GM andAspergillusPCR, in the clinical setting.CrossRefPubMed • Vrioni G, Theodoridou K, Tsiamis C, Mavrouli M, Kapsimali V, Rigopoulos D, et al. Use of Galactomannan antigen and Aspergillus DNA real time polymerase chain reaction as routine methods for invasive aspergillosis in immunosuppressed children in Greece. Clinical Therapeutics. 2018;40(6):918–24. https://​doi.​org/​10.​1016/​j.​clinthera.​2018.​05.​002Supportive evidence for combining GM andAspergillusPCR, in the clinical setting.CrossRefPubMed
70.
go back to reference • Clancy C, Nguyen M. T2 magnetic resonance for the diagnosis of bloodstream infections:charting a path forward. Journal of Antimicrobial Chemotherapy. 2018;73(4):2–5. https://doi.org/10.1093/jac/dky050Exciting prospect, moving forward, to consider MR technology facilitating more rapid turnaround of PCR based methods.CrossRef • Clancy C, Nguyen M. T2 magnetic resonance for the diagnosis of bloodstream infections:charting a path forward. Journal of Antimicrobial Chemotherapy. 2018;73(4):2–5. https://​doi.​org/​10.​1093/​jac/​dky050Exciting prospect, moving forward, to consider MR technology facilitating more rapid turnaround of PCR based methods.CrossRef
71.
go back to reference Mylonakis E, Clancy CJ, Ostrosky-Zeichner L. T2 magnetic resonance assay for the rapid diagnosis of candidemia in whole blood: a clinical trial. Clinical Infectious Diseases. 2015;60:892–9.CrossRef Mylonakis E, Clancy CJ, Ostrosky-Zeichner L. T2 magnetic resonance assay for the rapid diagnosis of candidemia in whole blood: a clinical trial. Clinical Infectious Diseases. 2015;60:892–9.CrossRef
72.
go back to reference Patch ME, Weisz E, Cubillos A. Impact of rapid, culture independent diagnosis of candidemia and invasive candidiasis in a community health system. Journal of Antimicrobial Chemotherapy. 2018;73(4):27–30.CrossRef Patch ME, Weisz E, Cubillos A. Impact of rapid, culture independent diagnosis of candidemia and invasive candidiasis in a community health system. Journal of Antimicrobial Chemotherapy. 2018;73(4):27–30.CrossRef
76.
go back to reference • Leroy-Freschini B, Treglia G, Argemi X, Bund C, Kessler R, Herbrecht R, et al. 18F-FDG PET/CT for invasive fungal infection in immunocompromised patients. QJM. 2018;111(9):613–22. https://doi.org/10.1093/qjmed/hcy128Study suggesting that an alternative approach to imaging could offer a means of treatment planning and more detailed definition of fungal disease.CrossRefPubMed • Leroy-Freschini B, Treglia G, Argemi X, Bund C, Kessler R, Herbrecht R, et al. 18F-FDG PET/CT for invasive fungal infection in immunocompromised patients. QJM. 2018;111(9):613–22. https://​doi.​org/​10.​1093/​qjmed/​hcy128Study suggesting that an alternative approach to imaging could offer a means of treatment planning and more detailed definition of fungal disease.CrossRefPubMed
Metadata
Title
From Culture to Fungal Biomarkers: the Diagnostic Route of Fungal Infections in Children with Primary Immunodeficiencies
Authors
Catherine Mark
Claire McGinn
Publication date
01-12-2019
Publisher
Springer US
Published in
Current Fungal Infection Reports / Issue 4/2019
Print ISSN: 1936-3761
Electronic ISSN: 1936-377X
DOI
https://doi.org/10.1007/s12281-019-00356-4

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