Skip to main content
Top
Published in: Virology Journal 1/2016

Open Access 01-12-2016 | Research

Molecular characterization of orf virus from sheep and goats in Ethiopia, 2008–2013

Authors: Esayas Gelaye, Jenna Elizabeth Achenbach, Shiferaw Jenberie, Gelagay Ayelet, Alebachew Belay, Martha Yami, Angelika Loitsch, Reingard Grabherr, Adama Diallo, Charles Euloge Lamien

Published in: Virology Journal | Issue 1/2016

Login to get access

Abstract

Background

Orf is a contagious disease of sheep, goats and wild ungulates caused by orf virus (ORFV) a member of the genus Parapoxvirus, Poxviridae family. Although orf is endemic in Ethiopia, little attention has been given so far as it is not a notifiable disease by the World Organization for Animal Health. In this work, we have investigated orf outbreaks representing five different geographical locations of Ethiopia, in Amba Giorgis, Gondar zuria, Adet, Debre zeit and Adami Tulu, between 2008 and 2013.

Results

The viral isolation and the sequence analysis of the A32L and the B2L genes of eighteen representative isolates confirmed that sampled animals were infected by ORFVs.
The phylogenetic study and the comparative analysis of the deduced amino acid profile suggests that there were two main clusters of ORFV isolates which were responsible for the investigated outbreaks. Additionally the analysis of these two genes showed limited variability to ORFVs encountered elsewhere. This is the first report on the genetic characterization of the ORFV isolates from sheep and goats in Ethiopia.

Conclusion

The molecular characterization of Ethiopian ORFV isolates highlighted the circulation of two main clusters causing orf disease in sheep and goats. The use of laboratory based methods and a constant monitoring of Ethiopian ORFV isolates is needed to better understand the dynamic of ORFV circulating in the country and facilitate the implementation of control measures.
Appendix
Available only for authorised users
Literature
1.
go back to reference Delhon G, Tulman ER, Afonso CL, Lu Z, de la Concha-Bermejillo A, Lehmkuhl HD, et al. Genomes of the parapoxviruses ORF virus and bovine papular stomatitis virus. J Virol. 2004;78:168–77.PubMedCentralCrossRefPubMed Delhon G, Tulman ER, Afonso CL, Lu Z, de la Concha-Bermejillo A, Lehmkuhl HD, et al. Genomes of the parapoxviruses ORF virus and bovine papular stomatitis virus. J Virol. 2004;78:168–77.PubMedCentralCrossRefPubMed
2.
go back to reference Chan KW, Yang CH, Lin JW, Wang HC, Lin FY, Kuo ST, et al. Phylogenetic analysis of parapoxviruses and the C-terminal heterogeneity of viral ATPase proteins. Gene. 2009;432:44–53.CrossRefPubMed Chan KW, Yang CH, Lin JW, Wang HC, Lin FY, Kuo ST, et al. Phylogenetic analysis of parapoxviruses and the C-terminal heterogeneity of viral ATPase proteins. Gene. 2009;432:44–53.CrossRefPubMed
3.
go back to reference Hosamani M, Scagliarini A, Bhanuprakash V, McInnes CJ, Singh RK. Orf: an update on current research and future perspectives. Expert Rev Anti Infect Ther. 2009;7:879–93.CrossRefPubMed Hosamani M, Scagliarini A, Bhanuprakash V, McInnes CJ, Singh RK. Orf: an update on current research and future perspectives. Expert Rev Anti Infect Ther. 2009;7:879–93.CrossRefPubMed
4.
go back to reference Li W, Ning Z, Hao W, Song D, Gao F, Zhao K, et al. Isolation and phylogenetic analysis of orf virus from the sheep herd outbreak in northeast China. BMC Vet Res. 2012;8:229.PubMedCentralCrossRefPubMed Li W, Ning Z, Hao W, Song D, Gao F, Zhao K, et al. Isolation and phylogenetic analysis of orf virus from the sheep herd outbreak in northeast China. BMC Vet Res. 2012;8:229.PubMedCentralCrossRefPubMed
5.
go back to reference Nandi S, De UK, Chowdhury S. Current status of contagious ecthyma or orf disease in goat and sheepGÇöA global perspective. Small Ruminant Research. 2011;96:73–82.CrossRef Nandi S, De UK, Chowdhury S. Current status of contagious ecthyma or orf disease in goat and sheepGÇöA global perspective. Small Ruminant Research. 2011;96:73–82.CrossRef
6.
go back to reference MacLachlan NJ, Dubovi EJ. Poxviridae. In: Fenner's Veterinary Virology. 4th ed. London: Academic; 2011. p. 151–65. MacLachlan NJ, Dubovi EJ. Poxviridae. In: Fenner's Veterinary Virology. 4th ed. London: Academic; 2011. p. 151–65.
8.
go back to reference Mercer AA, Ueda N, Friederichs SM, Hofmann K, Fraser KM, Bateman T, et al. Comparative analysis of genome sequences of three isolates of Orf virus reveals unexpected sequence variation. Virus Res. 2006;116:146–58.CrossRefPubMed Mercer AA, Ueda N, Friederichs SM, Hofmann K, Fraser KM, Bateman T, et al. Comparative analysis of genome sequences of three isolates of Orf virus reveals unexpected sequence variation. Virus Res. 2006;116:146–58.CrossRefPubMed
9.
go back to reference Yogisharadhya R, Bhanuprakash V, Venkatesan G, Balamurugan V, Pandey AB, Shivachandra SB. Comparative sequence analysis of poxvirus A32 gene encoded ATPase protein and carboxyl terminal heterogeneity of Indian orf viruses. Vet Microbiol. 2012;156:72–80.CrossRefPubMed Yogisharadhya R, Bhanuprakash V, Venkatesan G, Balamurugan V, Pandey AB, Shivachandra SB. Comparative sequence analysis of poxvirus A32 gene encoded ATPase protein and carboxyl terminal heterogeneity of Indian orf viruses. Vet Microbiol. 2012;156:72–80.CrossRefPubMed
10.
go back to reference Billinis C, Mavrogianni VS, Spyrou V, Fthenakis GC. Phylogenetic analysis of strains of Orf virus isolated from two outbreaks of the disease in sheep in Greece. Virol J. 2012;9:24.PubMedCentralCrossRefPubMed Billinis C, Mavrogianni VS, Spyrou V, Fthenakis GC. Phylogenetic analysis of strains of Orf virus isolated from two outbreaks of the disease in sheep in Greece. Virol J. 2012;9:24.PubMedCentralCrossRefPubMed
11.
go back to reference Zhang K, Liu Y, Kong H, Shang Y, Liu X. Comparison and phylogenetic analysis based on the B2L gene of orf virus from goats and sheep in China during 2009–2011. Arch Virol. 2014;159:1475–9.PubMedCentralCrossRefPubMed Zhang K, Liu Y, Kong H, Shang Y, Liu X. Comparison and phylogenetic analysis based on the B2L gene of orf virus from goats and sheep in China during 2009–2011. Arch Virol. 2014;159:1475–9.PubMedCentralCrossRefPubMed
12.
go back to reference Koonin EV, Senkevich TG, Chernos VI. Gene A32 product of vaccinia virus may be an ATPase involved in viral DNA packaging as indicated by sequence comparisons with other putative viral ATPases. Virus Genes. 1993;7:89–94.CrossRefPubMed Koonin EV, Senkevich TG, Chernos VI. Gene A32 product of vaccinia virus may be an ATPase involved in viral DNA packaging as indicated by sequence comparisons with other putative viral ATPases. Virus Genes. 1993;7:89–94.CrossRefPubMed
13.
go back to reference Ogura T, Wilkinson AJ. AAA+ superfamily ATPases: common structure--diverse function. Genes Cells. 2001;6:575–97.CrossRefPubMed Ogura T, Wilkinson AJ. AAA+ superfamily ATPases: common structure--diverse function. Genes Cells. 2001;6:575–97.CrossRefPubMed
14.
go back to reference Burroughs AM, Iyer LM, Aravind L. Comparative genomics and evolutionary trajectories of viral ATP dependent DNA-packaging systems. Genome Dyn. 2007;3:48–65.CrossRefPubMed Burroughs AM, Iyer LM, Aravind L. Comparative genomics and evolutionary trajectories of viral ATP dependent DNA-packaging systems. Genome Dyn. 2007;3:48–65.CrossRefPubMed
15.
go back to reference Lin FY, Chan KW, Wang CY, Wong ML, Hsu WL. Purification and functional motifs of the recombinant ATPase of orf virus. Protein Expr Purif. 2011;79:210–6.CrossRefPubMed Lin FY, Chan KW, Wang CY, Wong ML, Hsu WL. Purification and functional motifs of the recombinant ATPase of orf virus. Protein Expr Purif. 2011;79:210–6.CrossRefPubMed
16.
go back to reference Torfason EG, Gunadottir S. Polymerase chain reaction for laboratory diagnosis of orf virus infections. J Clin Virol. 2002;24:79–84.CrossRefPubMed Torfason EG, Gunadottir S. Polymerase chain reaction for laboratory diagnosis of orf virus infections. J Clin Virol. 2002;24:79–84.CrossRefPubMed
17.
go back to reference Chan KW, Yang CH, Lin JW, Wang HC, Lin FY, Kuo ST, et al. Phylogenetic analysis of parapoxviruses and the C-terminal heterogeneity of viral ATPase proteins. Gene. 2009;432:44–53.CrossRefPubMed Chan KW, Yang CH, Lin JW, Wang HC, Lin FY, Kuo ST, et al. Phylogenetic analysis of parapoxviruses and the C-terminal heterogeneity of viral ATPase proteins. Gene. 2009;432:44–53.CrossRefPubMed
18.
go back to reference Hautaniemi M, Ueda N, Tuimala J, Mercer AA, Lahdenperä J, McInnes CJ. The genome of pseudocowpoxvirus: comparison of a reindeer isolate and a reference strain. J Gen Virol. 2010; 91:1560–76.CrossRefPubMed Hautaniemi M, Ueda N, Tuimala J, Mercer AA, Lahdenperä J, McInnes CJ. The genome of pseudocowpoxvirus: comparison of a reindeer isolate and a reference strain. J Gen Virol. 2010; 91:1560–76.CrossRefPubMed
19.
go back to reference Oem JK, Roh IS, Lee KH, Lee KK, Kim HR, Jean YH, et al. Phylogenetic analysis and characterization of Korean orf virus from dairy goats: case report. Virol J. 2009;6:167.PubMedCentralCrossRefPubMed Oem JK, Roh IS, Lee KH, Lee KK, Kim HR, Jean YH, et al. Phylogenetic analysis and characterization of Korean orf virus from dairy goats: case report. Virol J. 2009;6:167.PubMedCentralCrossRefPubMed
20.
go back to reference Guo J, Zhang Z, Edwards JF, Ermel RW, Taylor C Jr, de la Concha-Bermejillo A. Characterization of a North American orf virus isolated from a goat with persistent, proliferative dermatitis. Virus Res. 2003;93:169–79.CrossRefPubMed Guo J, Zhang Z, Edwards JF, Ermel RW, Taylor C Jr, de la Concha-Bermejillo A. Characterization of a North American orf virus isolated from a goat with persistent, proliferative dermatitis. Virus Res. 2003;93:169–79.CrossRefPubMed
21.
go back to reference Guo J, Rasmussen J, Wünschmann A, de La Concha-Bermejillo A. Genetic characterization of orf viruses isolated from various ruminant species of a zoo. Vet Microbiol. 2004;99:81–92.CrossRefPubMed Guo J, Rasmussen J, Wünschmann A, de La Concha-Bermejillo A. Genetic characterization of orf viruses isolated from various ruminant species of a zoo. Vet Microbiol. 2004;99:81–92.CrossRefPubMed
22.
go back to reference Hosamani M, Bhanuprakash V, Scagliarini A, Singh RK. Comparative sequence analysis of major envelope protein gene (B2L) of Indian orf viruses isolated from sheep and goats. Vet Microbiol. 2006;116:317–24.CrossRefPubMed Hosamani M, Bhanuprakash V, Scagliarini A, Singh RK. Comparative sequence analysis of major envelope protein gene (B2L) of Indian orf viruses isolated from sheep and goats. Vet Microbiol. 2006;116:317–24.CrossRefPubMed
23.
go back to reference Bora DP, Barman NN, Das SK, Bhanuprakash V, Yogisharadhya R, Venkatesan G, et al. Identification and phylogenetic analysis of orf viruses isolated from outbreaks in goats of Assam, a northeastern state of India. Virus Genes. 2012;45:98–104.CrossRefPubMed Bora DP, Barman NN, Das SK, Bhanuprakash V, Yogisharadhya R, Venkatesan G, et al. Identification and phylogenetic analysis of orf viruses isolated from outbreaks in goats of Assam, a northeastern state of India. Virus Genes. 2012;45:98–104.CrossRefPubMed
24.
go back to reference Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731–9.PubMedCentralCrossRefPubMed Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731–9.PubMedCentralCrossRefPubMed
25.
go back to reference Zhang K, Shang Y, Jin Y, Wang G, Zheng H, He J, et al. Diagnosis and phylogenetic analysis of Orf virus from goats in China: a case report. Virol J. 2010;7:78.PubMedCentralCrossRefPubMed Zhang K, Shang Y, Jin Y, Wang G, Zheng H, He J, et al. Diagnosis and phylogenetic analysis of Orf virus from goats in China: a case report. Virol J. 2010;7:78.PubMedCentralCrossRefPubMed
26.
go back to reference Lojkic I, Cac Z, Beck A, Bedekovic T, Cvetnic Z, Sostaric B. Phylogenetic analysis of Croatian orf viruses isolated from sheep and goats. Virol J. 2010;7:314.PubMedCentralCrossRefPubMed Lojkic I, Cac Z, Beck A, Bedekovic T, Cvetnic Z, Sostaric B. Phylogenetic analysis of Croatian orf viruses isolated from sheep and goats. Virol J. 2010;7:314.PubMedCentralCrossRefPubMed
27.
go back to reference Oem JK, Chung JY, Kim YJ, Lee KK, Kim SH, Jung BY, et al. Isolation and characterization of orf viruses from Korean black goats. J Vet Sci. 2013;14:227–30.PubMedCentralCrossRefPubMed Oem JK, Chung JY, Kim YJ, Lee KK, Kim SH, Jung BY, et al. Isolation and characterization of orf viruses from Korean black goats. J Vet Sci. 2013;14:227–30.PubMedCentralCrossRefPubMed
28.
go back to reference Roess AA, Galan A, Kitces E, Li Y, Zhao H, Paddock CD, et al. Novel deer-associated parapoxvirus infection in deer hunters. N Engl J Med. 2010;363:2621–7.CrossRefPubMed Roess AA, Galan A, Kitces E, Li Y, Zhao H, Paddock CD, et al. Novel deer-associated parapoxvirus infection in deer hunters. N Engl J Med. 2010;363:2621–7.CrossRefPubMed
Metadata
Title
Molecular characterization of orf virus from sheep and goats in Ethiopia, 2008–2013
Authors
Esayas Gelaye
Jenna Elizabeth Achenbach
Shiferaw Jenberie
Gelagay Ayelet
Alebachew Belay
Martha Yami
Angelika Loitsch
Reingard Grabherr
Adama Diallo
Charles Euloge Lamien
Publication date
01-12-2016
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2016
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/s12985-016-0489-3

Other articles of this Issue 1/2016

Virology Journal 1/2016 Go to the issue