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01-02-2018 | Brief Report

High genetic diversity of porcine enterovirus G in Schleswig-Holstein, Germany

Authors: Jennifer Bunke, Kerstin Receveur, Ann Christin Oeser, Helmut Fickenscher, Roland Zell, Andi Krumbholz

Published in: Archives of Virology | Issue 2/2018

Abstract

Between 2012 and 2015, 495 pooled snout swabs from fattening pigs raised in Schleswig-Holstein, Germany, were screened for the presence of enterovirus G (EV-G) RNA. Nucleic acids were tested in diverse reverse transcription polymerase chain reaction assays applying published oligonucleotide primers specific for the viral protein (VP) 1 and 2/4 encoding regions as well as for 3D polymerase. Phylogenetic analyses of VP1 revealed the presence of 12 EV-G types, three of which had highly divergent sequences suggesting putative new types. Co-circulation of EV-G types was observed in several pigsties. Thus, genetic diversity of EV-G was demonstrated in this small geographic area.

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Title: High genetic diversity of porcine enterovirus G in Schleswig-Holstein, Germany
Authors: Jennifer Bunke
Kerstin Receveur
Ann Christin Oeser
Helmut Fickenscher
Roland Zell
Andi Krumbholz
Publication date: 01-02-2018
Publisher: Springer Vienna
Published in: Archives of Virology / Issue 2/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-017-3612-x

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