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Published in: Archives of Virology 9/2017

01-09-2017 | Brief Report

An updated proposal for classification of infectious salmon anemia virus strains

Authors: Constanza Cárdenas, Nicolás Ojeda, Alvaro Labra, Sergio H. Marshall

Published in: Archives of Virology | Issue 9/2017

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Abstract

Biological databases contain a wealth of valuable information that can contribute to the enrichment of virtually any area. However, the exponential growth of information together with its dissemination through virtual networks has become a double-edged sword, promoting synonymy that leads to confusion and chaos. Organization of data is a big effort that must be accompanied by clarity, both in the deposited data and in the publications arising from them. In this report, an effort is made to organize the information related to infectious salmon anemia virus and its classification based on the variability of genomic segment 6.
Literature
2.
go back to reference Thorud K, Djupvik HO (1988) Infectious salmon anaemia virus in Atlantic salmon (Salmo salar L.). Bull Eur Assoc Fish Pathol 8:109–111 Thorud K, Djupvik HO (1988) Infectious salmon anaemia virus in Atlantic salmon (Salmo salar L.). Bull Eur Assoc Fish Pathol 8:109–111
3.
go back to reference Mullins JE, Groman D, Wadowska D, Wadoska D (1998) Infectious salmon anaemia in salt water Atlantic salmon (Salmo salar L.) in New Brunswick, Canada. Bull Eur Assoc Fish Pathol 18:110–114 Mullins JE, Groman D, Wadowska D, Wadoska D (1998) Infectious salmon anaemia in salt water Atlantic salmon (Salmo salar L.) in New Brunswick, Canada. Bull Eur Assoc Fish Pathol 18:110–114
4.
go back to reference Bouchard D, Keleher W, Opitz HM, Blake S, Edwards KC, Nicholson BL (1999) Isolation of infectious salmon anemia virus (ISAV) from Atlantic salmon in New Brunswick, Canada. Dis Aquat Org 35:131–137. doi:10.3354/dao035131 CrossRefPubMed Bouchard D, Keleher W, Opitz HM, Blake S, Edwards KC, Nicholson BL (1999) Isolation of infectious salmon anemia virus (ISAV) from Atlantic salmon in New Brunswick, Canada. Dis Aquat Org 35:131–137. doi:10.​3354/​dao035131 CrossRefPubMed
5.
go back to reference Lovely JE, Dannevig BH, Falk K, Hutchin L, MacKinnon AM, Melville KJ, Rimstad E, Griffiths SG (1999) First identification of infectious salmon anaemia virus in North America with haemorrhagic kidney syndrome. Dis Aquat Org 35:145–148. doi:10.1371/journal.pone.0037265 CrossRefPubMed Lovely JE, Dannevig BH, Falk K, Hutchin L, MacKinnon AM, Melville KJ, Rimstad E, Griffiths SG (1999) First identification of infectious salmon anaemia virus in North America with haemorrhagic kidney syndrome. Dis Aquat Org 35:145–148. doi:10.​1371/​journal.​pone.​0037265 CrossRefPubMed
6.
go back to reference Bouchard D, Brockway K, Giray C, Keleher W, Merrill P (2001) First report of infectious salmon anemia (ISA) in the United States. Bull Eur Assoc Fish Pathol 21:86–88 Bouchard D, Brockway K, Giray C, Keleher W, Merrill P (2001) First report of infectious salmon anemia (ISA) in the United States. Bull Eur Assoc Fish Pathol 21:86–88
7.
go back to reference Rodger H, Turnbull T, Muir F, Millar S, Richards R (1998) Infectious salmon anaemia (ISA) in the United Kingdom. Bull Eur Assoc Fish Pathol 18:115–116 Rodger H, Turnbull T, Muir F, Millar S, Richards R (1998) Infectious salmon anaemia (ISA) in the United Kingdom. Bull Eur Assoc Fish Pathol 18:115–116
8.
go back to reference Lyngoy C (2003) Infectious salmon anemia in Norway and the Faroe Islands: An industrial approach. In: Miller O, Cipriano R (eds) International response to infectious salmon anemia: Prevention, control, and eradication. US Department of Agriculture, Washington, DC, pp 97–109 Lyngoy C (2003) Infectious salmon anemia in Norway and the Faroe Islands: An industrial approach. In: Miller O, Cipriano R (eds) International response to infectious salmon anemia: Prevention, control, and eradication. US Department of Agriculture, Washington, DC, pp 97–109
9.
go back to reference Kibenge FS, Gárate ON, Johnson G, Arriagada R, Kibenge MJ, Wadowska D (2001) Isolation and identification of infectious salmon anaemia virus (ISAV) from Coho salmon in Chile. Dis Aquat Org 45:9–18. doi:10.3354/dao045009 CrossRefPubMed Kibenge FS, Gárate ON, Johnson G, Arriagada R, Kibenge MJ, Wadowska D (2001) Isolation and identification of infectious salmon anaemia virus (ISAV) from Coho salmon in Chile. Dis Aquat Org 45:9–18. doi:10.​3354/​dao045009 CrossRefPubMed
10.
go back to reference Godoy MG, Aedo A, Kibenge MJT, Groman DB, Yason CV, Grothusen H, Lisperguer A, Calbucura M, Avendaño F, Imilán M, Jarpa M, Kibenge FSB (2008) First detection, isolation and molecular characterization of infectious salmon anaemia virus associated with clinical disease in farmed Atlantic salmon (Salmo salar) in Chile. BMC Vet Res 4:28. doi:10.1186/1746-6148-4-28 CrossRefPubMedPubMedCentral Godoy MG, Aedo A, Kibenge MJT, Groman DB, Yason CV, Grothusen H, Lisperguer A, Calbucura M, Avendaño F, Imilán M, Jarpa M, Kibenge FSB (2008) First detection, isolation and molecular characterization of infectious salmon anaemia virus associated with clinical disease in farmed Atlantic salmon (Salmo salar) in Chile. BMC Vet Res 4:28. doi:10.​1186/​1746-6148-4-28 CrossRefPubMedPubMedCentral
11.
go back to reference Kawaoka Y, Cox NJ, Haller O (2005) Infectious salmon anemia virus. In: Fauquet C, Mayo M, Maniloff U, Desselberger U, Ball L (eds) Virus taxonomy. Classification and nomenclature of viruses: Eighth Report of the International Committee on Taxonomy of Viruses. Academic Press, Elsevier, pp 681–693 Kawaoka Y, Cox NJ, Haller O (2005) Infectious salmon anemia virus. In: Fauquet C, Mayo M, Maniloff U, Desselberger U, Ball L (eds) Virus taxonomy. Classification and nomenclature of viruses: Eighth Report of the International Committee on Taxonomy of Viruses. Academic Press, Elsevier, pp 681–693
12.
go back to reference Falk K, Namork E, Rimstad E, Mjaaland S, Dannevig BH (1997) Characterization of infectious salmon anemia virus, an orthomyxo-like virus isolated from Atlantic salmon (Salmo salar L.). J Virol 71:9016–9023PubMedPubMedCentral Falk K, Namork E, Rimstad E, Mjaaland S, Dannevig BH (1997) Characterization of infectious salmon anemia virus, an orthomyxo-like virus isolated from Atlantic salmon (Salmo salar L.). J Virol 71:9016–9023PubMedPubMedCentral
13.
go back to reference Mjaaland S, Rimstad E, Falk K, Dannevig BH (1997) Genomic characterization of the virus causing infectious salmon anemia in Atlantic salmon (Salmo salar L.): an orthomyxo-like virus in a teleost. J Virol 71:7681–7686PubMedPubMedCentral Mjaaland S, Rimstad E, Falk K, Dannevig BH (1997) Genomic characterization of the virus causing infectious salmon anemia in Atlantic salmon (Salmo salar L.): an orthomyxo-like virus in a teleost. J Virol 71:7681–7686PubMedPubMedCentral
14.
go back to reference Blake S, Bouchard D, Keleher W, Opitz M, Nicholson BL (1999) Genomic relationships of the North American isolate of infectious salmon anemia virus (ISAV) to the Norwegian strain of ISAV. Dis Aquat Org 35:139–144. doi:10.3354/dao035139 (erratum in: Dis Aquat Org 36:238) CrossRefPubMed Blake S, Bouchard D, Keleher W, Opitz M, Nicholson BL (1999) Genomic relationships of the North American isolate of infectious salmon anemia virus (ISAV) to the Norwegian strain of ISAV. Dis Aquat Org 35:139–144. doi:10.​3354/​dao035139 (erratum in: Dis Aquat Org 36:238) CrossRefPubMed
15.
go back to reference Krossøy B, Nilsen F, Falk K, Endresen C, Nylund A (2001) Phylogenetic analysis of infectious salmon anaemia virus isolates from Norway, Canada and Scotland. Dis Aquat Org 44:1–6. doi:10.3354/dao044001 CrossRefPubMed Krossøy B, Nilsen F, Falk K, Endresen C, Nylund A (2001) Phylogenetic analysis of infectious salmon anaemia virus isolates from Norway, Canada and Scotland. Dis Aquat Org 44:1–6. doi:10.​3354/​dao044001 CrossRefPubMed
16.
go back to reference Devold M, Falk K, Dale B, Krossøy B, Biering E, Aspehaug V, Nilsen F, Nylund A (2001) Strain variation, based on the hemagglutinin gene, in Norwegian ISA virus isolates collected from 1987 to 2001: indications of recombination. Dis Aquat Org 47:119–128. doi:10.3354/dao047119 CrossRefPubMed Devold M, Falk K, Dale B, Krossøy B, Biering E, Aspehaug V, Nilsen F, Nylund A (2001) Strain variation, based on the hemagglutinin gene, in Norwegian ISA virus isolates collected from 1987 to 2001: indications of recombination. Dis Aquat Org 47:119–128. doi:10.​3354/​dao047119 CrossRefPubMed
17.
go back to reference Kibenge FS, Kibenge MJ, McKenna PK, Stothard P, Marshall R, Cusack RR, McGeachy S (2001) Antigenic variation among isolates of infectious salmon anaemia virus correlates with genetic variation of the viral haemagglutinin gene. J Gen Virol 82:2869–2879. doi:10.1099/0022-1317-82-12-2869 CrossRefPubMed Kibenge FS, Kibenge MJ, McKenna PK, Stothard P, Marshall R, Cusack RR, McGeachy S (2001) Antigenic variation among isolates of infectious salmon anaemia virus correlates with genetic variation of the viral haemagglutinin gene. J Gen Virol 82:2869–2879. doi:10.​1099/​0022-1317-82-12-2869 CrossRefPubMed
18.
go back to reference Nylund A, Devold M, Plarre H, Isdal E, Aarseth M (2003) Emergence and maintenance of infectious salmon anaemia virus (ISAV) in Europe: a new hypothesis. Dis Aquat Org 56:11–24. doi:10.3354/dao056011 CrossRefPubMed Nylund A, Devold M, Plarre H, Isdal E, Aarseth M (2003) Emergence and maintenance of infectious salmon anaemia virus (ISAV) in Europe: a new hypothesis. Dis Aquat Org 56:11–24. doi:10.​3354/​dao056011 CrossRefPubMed
19.
go back to reference Mjaaland S, Hungnes O, Teig A, Dannevig BH, Thorud K, Rimstad E (2002) Polymorphism in the infectious salmon anemia virus hemagglutinin gene: Importance and possible implications for evolution and ecology of infectious salmon anemia disease. Virology 304:379–391. doi:10.1006/viro.2002.1658 CrossRefPubMed Mjaaland S, Hungnes O, Teig A, Dannevig BH, Thorud K, Rimstad E (2002) Polymorphism in the infectious salmon anemia virus hemagglutinin gene: Importance and possible implications for evolution and ecology of infectious salmon anemia disease. Virology 304:379–391. doi:10.​1006/​viro.​2002.​1658 CrossRefPubMed
20.
21.
go back to reference Nylund A, Plarre H, Karlsen M, Fridell F, Ottem KF, Bratland A, Sæther PA (2007) Transmission of infectious salmon anaemia virus (ISAV) in farmed populations of Atlantic salmon (Salmo salar). Arch Virol 152:151–179. doi:10.1007/s00705-006-0825-9 CrossRefPubMed Nylund A, Plarre H, Karlsen M, Fridell F, Ottem KF, Bratland A, Sæther PA (2007) Transmission of infectious salmon anaemia virus (ISAV) in farmed populations of Atlantic salmon (Salmo salar). Arch Virol 152:151–179. doi:10.​1007/​s00705-006-0825-9 CrossRefPubMed
22.
24.
go back to reference Kibenge FSB, Godoy MG, Wang Y, Kibenge MJT, Gherardelli V, Mansilla S, Lisperger A, Jarpa M, Larroquete G, Avendaño F, Lara M, Gallardo A (2009) Infectious salmon anaemia virus (ISAV) isolated from the ISA disease outbreaks in Chile diverged from ISAV isolates from Norway around 1996 and was disseminated around 2005, based on surface glycoprotein gene sequences. Virol J 6:88. doi:10.1186/1743-422X-6-88 CrossRefPubMedPubMedCentral Kibenge FSB, Godoy MG, Wang Y, Kibenge MJT, Gherardelli V, Mansilla S, Lisperger A, Jarpa M, Larroquete G, Avendaño F, Lara M, Gallardo A (2009) Infectious salmon anaemia virus (ISAV) isolated from the ISA disease outbreaks in Chile diverged from ISAV isolates from Norway around 1996 and was disseminated around 2005, based on surface glycoprotein gene sequences. Virol J 6:88. doi:10.​1186/​1743-422X-6-88 CrossRefPubMedPubMedCentral
25.
27.
go back to reference Godoy MG, Kibenge MJ, Suarez R, Lazo E, Heisinger A, Aguinaga J, Bravo D, Mendoza J, Llegues KO (2013) Infectious salmon anaemia virus (ISAV) in Chilean Atlantic salmon (Salmo salar) aquaculture: emergence of low pathogenic ISAV-HPR0 and re-emergence of virulent ISAV-HPR∆: HPR3 and HPR14. Virol J 10:344. doi:10.1186/1743-422X-10-344 CrossRefPubMedPubMedCentral Godoy MG, Kibenge MJ, Suarez R, Lazo E, Heisinger A, Aguinaga J, Bravo D, Mendoza J, Llegues KO (2013) Infectious salmon anaemia virus (ISAV) in Chilean Atlantic salmon (Salmo salar) aquaculture: emergence of low pathogenic ISAV-HPR0 and re-emergence of virulent ISAV-HPR∆: HPR3 and HPR14. Virol J 10:344. doi:10.​1186/​1743-422X-10-344 CrossRefPubMedPubMedCentral
Metadata
Title
An updated proposal for classification of infectious salmon anemia virus strains
Authors
Constanza Cárdenas
Nicolás Ojeda
Alvaro Labra
Sergio H. Marshall
Publication date
01-09-2017
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 9/2017
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-017-3440-z

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