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Published in: Archives of Virology 5/2008

01-05-2008 | Annotated Sequence Record

Complete genomic sequence of a Papaya ringspot virus isolate from Hainan Island, China

Authors: Y. W. Lu, W. T. Shen, P. Zhou, Q. J. Tang, Y. M. Niu, M. Peng, Z. Xiong

Published in: Archives of Virology | Issue 5/2008

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Excerpt

Papaya ringspot virus (PRSV, genus Potyvirus, family Potyviridae) causes significant yield losses in papaya and in some cucurbits throughout tropical and subtropical regions [7]. Based on its host specificity, PRSV is classified into two biotypes. Type W is known to infect only cucurbits, whereas type P infects both papaya and cucurbits. The first PRSV genome completely sequenced and characterized was the Hawaiian isolate, PRSV-H [11]. The complete sequences of a number of PRSV isolates have since been determined [2, 3, 5, 6, 10]. …
Literature
1.
go back to reference Altshul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410 Altshul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
2.
go back to reference Attasart P, Charoensilp G, Kerbundit S, Panyim S, Juricek M (2002) Nucleotide sequence of a Thai isolate of Papaya ringspot virus type W. Acta Virol l46:241–246 Attasart P, Charoensilp G, Kerbundit S, Panyim S, Juricek M (2002) Nucleotide sequence of a Thai isolate of Papaya ringspot virus type W. Acta Virol l46:241–246
3.
go back to reference Inoue-Nagata AK, Franco CD, Martin DP, Martin DP, Rezende JA, Ferreira GB, Dutra LS, Nagata T (2007) Genome analysis of a severe and a mild isolate of Papaya ringspot virus-type W found in Brazil. Virus Genes 35(1):119–127PubMedCrossRef Inoue-Nagata AK, Franco CD, Martin DP, Martin DP, Rezende JA, Ferreira GB, Dutra LS, Nagata T (2007) Genome analysis of a severe and a mild isolate of Papaya ringspot virus-type W found in Brazil. Virus Genes 35(1):119–127PubMedCrossRef
4.
go back to reference Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163PubMedCrossRef Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163PubMedCrossRef
5.
go back to reference Noa-Carrazana JC, Gonzalez-de-Leon D, Silva-Rosales L (2007) Molecular characterization of a severe isolate of papaya ringspot virus in Mexico and its relationship with other isolates. Virus Genes 35(1):109–117PubMedCrossRef Noa-Carrazana JC, Gonzalez-de-Leon D, Silva-Rosales L (2007) Molecular characterization of a severe isolate of papaya ringspot virus in Mexico and its relationship with other isolates. Virus Genes 35(1):109–117PubMedCrossRef
6.
go back to reference Parameswari B, Mangrauthia S K, Praveen S, Jain R K (2007) Complete genome sequence of an isolate of Papaya ringspot virus from India. Arch Virol 152:843–845PubMedCrossRef Parameswari B, Mangrauthia S K, Praveen S, Jain R K (2007) Complete genome sequence of an isolate of Papaya ringspot virus from India. Arch Virol 152:843–845PubMedCrossRef
7.
go back to reference Purcifull DE, Edwardson JR, Hiebert E, Gonsalves D (1984) Papaya ringspot virus. CMI/AAB descriptions of plant virus, No 292 Purcifull DE, Edwardson JR, Hiebert E, Gonsalves D (1984) Papaya ringspot virus. CMI/AAB descriptions of plant virus, No 292
8.
go back to reference Tennant P, Fermin G, Fitch MM, Manshardt RM, Slightom JL, Gonsalves D (2001) Papaya ringspot virus resistance of transgenic rainbow and SunUp is affected by gene dosage, plant development, and coat protein homology. Eur J Plant Pathol 107:645–653CrossRef Tennant P, Fermin G, Fitch MM, Manshardt RM, Slightom JL, Gonsalves D (2001) Papaya ringspot virus resistance of transgenic rainbow and SunUp is affected by gene dosage, plant development, and coat protein homology. Eur J Plant Pathol 107:645–653CrossRef
9.
go back to reference Tennant P, Souza MT, Gonsalves D, Fitch MM, Manshardt RM, Slightom JL (2005) Line 63-1: a new virus-resistant transgenic papaya. Hortscience 40:1196–1199 Tennant P, Souza MT, Gonsalves D, Fitch MM, Manshardt RM, Slightom JL (2005) Line 63-1: a new virus-resistant transgenic papaya. Hortscience 40:1196–1199
10.
go back to reference Wang CH, Yeh SD (1997) Divergence and conservation of the genomic RNAs of Taiwan and Hawaii strains of papaya ringspot potyvirus. Arch Virol 142:271–85PubMedCrossRef Wang CH, Yeh SD (1997) Divergence and conservation of the genomic RNAs of Taiwan and Hawaii strains of papaya ringspot potyvirus. Arch Virol 142:271–85PubMedCrossRef
11.
go back to reference Yeh SD, Jan FJ, Chiang CH, Doong TJ, Chen MC, Chung PH, Bau HJ (1992) Complete nucleotide sequence and genetic organization of Papaya ringspot virus RNA. J Gen Virol 73:2531–2541PubMedCrossRef Yeh SD, Jan FJ, Chiang CH, Doong TJ, Chen MC, Chung PH, Bau HJ (1992) Complete nucleotide sequence and genetic organization of Papaya ringspot virus RNA. J Gen Virol 73:2531–2541PubMedCrossRef
Metadata
Title
Complete genomic sequence of a Papaya ringspot virus isolate from Hainan Island, China
Authors
Y. W. Lu
W. T. Shen
P. Zhou
Q. J. Tang
Y. M. Niu
M. Peng
Z. Xiong
Publication date
01-05-2008
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 5/2008
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-008-0056-3

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