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Published in: European Journal of Clinical Microbiology & Infectious Diseases 11/2021

01-11-2021 | Escherichia Coli | Brief Report

Rapid detection of NDM and VIM carbapenemase encoding genes by recombinase polymerase amplification and lateral flow–based detection

Authors: Abdulrahman K. S. Ayfan, Joanne Macdonald, Patrick N. A. Harris, Claire Heney, David L. Paterson, Ella Trembizki, Claire Y. T. Wang, David M. Whiley, Hosam M. Zowawi, Adam D. Irwin

Published in: European Journal of Clinical Microbiology & Infectious Diseases | Issue 11/2021

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Abstract

Carbapenemase-producing organisms (CPOs) pose a serious clinical threat and rapid detection tools are essential to aid in patient management. We developed rapid and simple molecular tests to detect blaNDM-type and blaVIM-type carbapenemase genes using recombinase polymerase amplification (RPA) combined with a lateral flow detection. The tests could provide results in approximately 15 min when using DNA extracts, with limits of detection of 9.2 copies/μl for the blaNDM-type assay and 7.5 copies/μl for blaVIM-type assay, and successfully detected all isolates harbouring the carbapenemase encoding genes in a panel of 57 isolates. These RPA tests may be suitable for use in low-resource settings to tailor rapid implementation of infection control precautions and antibiotic stewardship.
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Metadata
Title
Rapid detection of NDM and VIM carbapenemase encoding genes by recombinase polymerase amplification and lateral flow–based detection
Authors
Abdulrahman K. S. Ayfan
Joanne Macdonald
Patrick N. A. Harris
Claire Heney
David L. Paterson
Ella Trembizki
Claire Y. T. Wang
David M. Whiley
Hosam M. Zowawi
Adam D. Irwin
Publication date
01-11-2021
Publisher
Springer Berlin Heidelberg
Published in
European Journal of Clinical Microbiology & Infectious Diseases / Issue 11/2021
Print ISSN: 0934-9723
Electronic ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-021-04267-6

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