Skip to main content
Key Specialties
Cardiology Diabetology Endocrinology Gastroenterology Geriatrics and Gerontology Gynecology and Obstetrics Hematology Infectious Disease Internal Medicine Nephrology Neurology Oncology Pediatrics Respiratory Medicine Rheumatology Surgery
Congress Coverage
2024 ACC Congress 2023 ESMO Congress 2023 EASD Congress 2023 ERS Congress 2023 ESC Congress
Clinical Collections
Advances in Alzheimer’s

Keynote webinar | Spotlight on medication adherence

LIVE: Thursday 27th June 2024, 18:00-19:30 (CEST)
Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.
ADVANCED SEARCH
Log in
Top
Archives of Virology
Published in: Archives of Virology 10/2019

01-10-2019 | Brief Report

Discovery of a virus of the species Enterovirus F in goats

Authors: Xiaoran Chang, Qian Lin, Junying Hu, Xu Wang, Xin Li, Menglu Cai, Weiyu Wang, Zecai Zhang, Xinping Wang

Published in: Archives of Virology | Issue 10/2019

Login to get access

Abstract

Here, we report two novel enteroviruses, designated as SD-S67 and SD-S68, isolated from a goat farm. Their complete genome sequences were determined and found to be 7455 and 7465 nucleotides in length, respectively. Molecular characterization revealed that SD-S67 is closely related to bovine enterovirus strain 261 and that SD-S68 to caprine enterovirus strain CEV-JL14. Phylogenetic analysis showed that SD-S67 clustered with members of the species Enterovirus F, and that SD-S68 clustered with enteroviruses of goats and sheep. Recombination analysis showed that SD-S67 is likely to have undergone several recombination events in the process of its evolution. To the best of our knowledge, this is the first report of an enterovirus F isolate from a goat and of a coinfection with enteroviruses of different species in the same goat herd.
Appendix
Available only for authorised users
Literature
1.
2.
Boros A, Pankovics P, Knowles NJ, Reuter G (2012) Natural interspecies recombinant bovine/porcine enterovirus in sheep. J Gen Virol 93:1941–1951CrossRefPubMed
3.
Bunke J, Receveur K, Oeser AC, Fickenscher H, Zell R, Krumbholz A (2018) High genetic diversity of porcine enterovirus G in Schleswig-Holstein, Germany. Arch Virol 163:489–493CrossRefPubMed
4.
He H, Tang C, Chen XN, Yue H, Ren YP, Liu Y, Zhang B (2017) Isolation and characterization of a new enterovirus F in yak feces in the Qinghai-Tibetan Plateau. Arch Virol 162:523–527CrossRefPubMed
5.
6.
7.
Kyriakopoulou Z, Pliaka V, Amoutzias GD, Markoulatos P (2015) Recombination among human non-polio enteroviruses: implications for epidemiology and evolution. Virus genes 50:177–188CrossRefPubMed
8.
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007) Clustal W and clustal X version 2.0. Bioinformatics 23:2947–2948CrossRefPubMed
9.
Li X, Hu J, Lin Q, Wang X, Zheng B, Zhang Z (2019) Epidemiological investigation on enterovirus infections in cattle/sheep/goat herds in Shandong Province. Chin J Vet Sci 39:223–227
10.
Li YL, Chang JT, Wang Q, Yu L (2012) Isolation of two Chinese bovine enteroviruses and sequence analysis of their complete genomes. Arch Virol 157:2369–2375CrossRefPubMedPubMedCentral
11.
Liu AP, Tan H, Xie Q, Chen BT, Liu XF, Zhang Y (2014) Genetic evidence for recombination and mutation in the emergence of human enterovirus 71. Chin J Virol 30:572–578
12.
Liu D, Liu C, Hu J, Hang L, Li X, Wei Y, Zhu H, Zhang Q, Wang X (2018) Construction and evaluation of HA-epitope-tag introduction onto the VP1 structural protein of a novel HY12 enterovirus. Virology 525:106–116CrossRefPubMed
13.
Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, Ray SC (1999) Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73:152–160PubMedPubMedCentral
14.
Martin D, Murrell B, Khoosal A, Muhire B (2017) Detecting and analyzing genetic recombination using RDP4. Methods Mol Biol 1525:433–460CrossRefPubMed
15.
Martin DP, Murrell B, Golden M, Khoosal A, Muhire B (2015) RDP4: detection and analysis of recombination patterns in virus genomes. Virus Evol 1:vev003CrossRefPubMedPubMedCentral
16.
17.
Nikolaidis M, Mimouli K, Kyriakopoulou Z, Tsimpidis M, Tsakogiannis D, Markoulatos P, Amoutzias GD (2019) Large-scale genomic analysis reveals recurrent patterns of intertypic recombination in human enteroviruses. Virology 526:72–80CrossRefPubMed
18.
Oberste MS, Maher K, Kilpatrick DR, Pallansch MA (1999) Molecular evolution of the human enteroviruses: Correlation of serotype with VP1 sequence and application to picornavirus classification. J Virol 73:1941–1948PubMedPubMedCentral
19.
Omatsu T, Tsuchiaka S, Hirata T, Shiroma Y, Okazaki S, Katayama Y, Oba M, Nishiura N, Sassa Y, Furuya T, Nagai M, Ochiai H, Tamaki S, Mizutani T (2014) Detection of enterovirus genome sequence from diarrheal feces of goat. Virus Genes 48:550–552CrossRefPubMed
20.
Pu XF, Qian YJ, Yu Y, Shen HX (2019) Echovirus plays a major role in natural recombination in the coxsackievirus B group. Arch Virol 164:853–860CrossRefPubMed
21.
Reed L, Muench H (1938) A simple method of estimating fifty percent endpoints. Am J Hyg 27:493–497
22.
Rice WR (2002) Experimental tests of the adaptive significance of sexual recombination. Nat Rev Genet 3:241–251CrossRefPubMed
23.
Schwerdt C, Schaffer F (1955) Some physical and chemical properties of purified poliomyelitis virus preparations. Ann N Y Acad Sci 61(4):740–750CrossRefPubMed
24.
Thompson J, Higgins D, Gibson T (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22(22):4673–4680CrossRefPubMedPubMedCentral
25.
Wang M, Wang X, Zhu L (2016) Detection of ovine enterovirus from sheep/goat with severe diarrhea. Chin J Vet Sci 36(10):1692–1695
26.
Wang M, He J, Lu H, Liu Y, Deng Y, Zhu L, Guo C, Tu C, Wang X (2017) A novel enterovirus species identified from severe diarrheal goats. PloS One 12:e0174600CrossRefPubMedPubMedCentral
27.
Woodman A, Lee KM, Janissen R, Gong YN, Dekker NH, Shih SR, Cameron CE (2019) Predicting intraserotypic recombination in Enterovirus 71. J Virol 93:e02057-18CrossRefPubMedPubMedCentral
28.
Zell R, Krumbholz A, Dauber M, Hoey E, Wutzler P (2006) Molecular-based reclassification of the bovine enteroviruses. J Gen Virol 87:375–385CrossRefPubMed
29.
Zell R, Delwart E, Gorbalenya AE, Hovi T, King AMQ, Knowles NJ, Lindberg AM, Pallansch MA, Palmenberg AC, Reuter G, Simmonds P, Skern T, Stanway G, Yamashita T, Ictv Report C (2017) ICTV virus taxonomy profile: picornaviridae. J Gen Virol 98:2421–2422CrossRefPubMedPubMedCentral
30.
Zhu L, Xing Z, Gai X, Li S, San Z, Wang X (2014) Identification of a novel enterovirus E isolates HY12 from cattle with severe respiratory and enteric diseases. PloS One 9:e97730CrossRefPubMedPubMedCentral
Metadata
Title
Discovery of a virus of the species Enterovirus F in goats
Authors
Xiaoran Chang
Qian Lin
Junying Hu
Xu Wang
Xin Li
Menglu Cai
Weiyu Wang
Zecai Zhang
Xinping Wang
Publication date
01-10-2019
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 10/2019
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-019-04331-9

Other articles of this Issue 10/2019

Archives of Virology 10/2019 Go to the issue

Brief Report

MTTP polymorphisms and hepatic steatosis in individuals chronically infected with hepatitis C virus

Brief Report

Molecular epidemiology of enterovirus from children with herpangina or hand, foot, and mouth disease in Hangzhou, 2016

Original Article

Altered gene expression profiles of the MDA5 signaling pathway in peripheral blood lymphocytes of chickens infected with avian reovirus

Annotated Sequence Record

A novel ourmia-like mycovirus isolated from the plant pathogenic fungus Colletotrichum gloeosporioides

Brief Report

NP protein and F protein of pigeon paramyxovirus type 1 are associated with its low pathogenicity in chickens

Annotated Sequence Record

Complete genome sequences of novel S-deletion variants of porcine epidemic diarrhea virus identified from a recurrent outbreak on Jeju Island, South Korea
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Reserve your place

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

Read more

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Pediatric Cardiology Video

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

Cardiopulmonary Comorbidity Video

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Valvular Heart Disease Video

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.

ACC 2024 Congress Coverage

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.

Watch now

Semaglutide benefits people with type 2 diabetes and obesity-related heart failure

16-04-2024 Type 2 Diabetes News

Incentivised to exercise

11-04-2024 Lifestyle Modifications News

New intervention for STEMI-related cardiogenic shock

10-04-2024 Myocardial Infarction News

» View more highlights on the ACC 2024 congress hub page

Image Credits