Skip to main content
Top
Published in: BMC Infectious Diseases 1/2021

Open Access 01-12-2021 | COVID-19 | Research article

A data-driven metapopulation model for the Belgian COVID-19 epidemic: assessing the impact of lockdown and exit strategies

Authors: Pietro Coletti, Pieter Libin, Oana Petrof, Lander Willem, Steven Abrams, Sereina A. Herzog, Christel Faes, Elise Kuylen, James Wambua, Philippe Beutels, Niel Hens

Published in: BMC Infectious Diseases | Issue 1/2021

Login to get access

Abstract

Background

In response to the ongoing COVID-19 pandemic, several countries adopted measures of social distancing to a different degree. For many countries, after successfully curbing the initial wave, lockdown measures were gradually lifted. In Belgium, such relief started on May 4th with phase 1, followed by several subsequent phases over the next few weeks.

Methods

We analysed the expected impact of relaxing stringent lockdown measures taken according to the phased Belgian exit strategy. We developed a stochastic, data-informed, meta-population model that accounts for mixing and mobility of the age-structured population of Belgium. The model is calibrated to daily hospitalization data and is able to reproduce the outbreak at the national level. We consider different scenarios for relieving the lockdown, quantified in terms of relative reductions in pre-pandemic social mixing and mobility. We validate our assumptions by making comparisons with social contact data collected during and after the lockdown.

Results

Our model is able to successfully describe the initial wave of COVID-19 in Belgium and identifies interactions during leisure/other activities as pivotal in the exit strategy. Indeed, we find a smaller impact of school re-openings as compared to restarting leisure activities and re-openings of work places. We also assess the impact of case isolation of new (suspected) infections, and find that it allows re-establishing relatively more social interactions while still ensuring epidemic control. Scenarios predicting a second wave of hospitalizations were not observed, suggesting that the per-contact probability of infection has changed with respect to the pre-lockdown period.

Conclusions

Contacts during leisure activities are found to be most influential, followed by professional contacts and school contacts, respectively, for an impending second wave of COVID-19. Regular re-assessment of social contacts in the population is therefore crucial to adjust to evolving behavioral changes that can affect epidemic diffusion.
Appendix
Available only for authorised users
Literature
3.
go back to reference Prem K, Liu Y, Russell TW, Kucharski AJ, Eggo RM, Davies N, Flasche S, Clifford S, Pearson CAB, Munday JD, Abbott S, Gibbs H, Rosello A, Quilty BJ, Jombart T, Sun F, Diamond C, Gimma A, van Zandvoort K, Funk S, Jarvis CI, Edmunds WJ, Bosse NI, Hellewell J, Jit M, Klepac P. The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study. Lancet Publ Health. 2020:261–70. https://doi.org/10.1016/S2468-2667(20)30073-. Prem K, Liu Y, Russell TW, Kucharski AJ, Eggo RM, Davies N, Flasche S, Clifford S, Pearson CAB, Munday JD, Abbott S, Gibbs H, Rosello A, Quilty BJ, Jombart T, Sun F, Diamond C, Gimma A, van Zandvoort K, Funk S, Jarvis CI, Edmunds WJ, Bosse NI, Hellewell J, Jit M, Klepac P. The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study. Lancet Publ Health. 2020:261–70. https://​doi.​org/​10.​1016/​S2468-2667(20)30073-.
5.
go back to reference Riccardo F, Ajelli M, Andrianou X, Bella A, Del Manso M, Fabiani M, Bellino S, Boros S, Mateo Urdiales A, Marziano V, Rota MC, Filia A, D extquoterightAncona FP, Siddu A, Punzo O, Trentini F, Guzzetta G, Poletti P, Stefanelli P, Castrucci MR, Ciervo A, Di Benedetto C, Tallon M, Piccioli A, Brusaferro S, Rezza G, Merler S, Pezzotti P. Epidemiological characteristics of COVID-19 cases in italy and estimates of the reproductive numbers one month into the epidemic. medRxiv. 2020. https://doi.org/10.1101/2020.04.08.20056861. Riccardo F, Ajelli M, Andrianou X, Bella A, Del Manso M, Fabiani M, Bellino S, Boros S, Mateo Urdiales A, Marziano V, Rota MC, Filia A, D extquoterightAncona FP, Siddu A, Punzo O, Trentini F, Guzzetta G, Poletti P, Stefanelli P, Castrucci MR, Ciervo A, Di Benedetto C, Tallon M, Piccioli A, Brusaferro S, Rezza G, Merler S, Pezzotti P. Epidemiological characteristics of COVID-19 cases in italy and estimates of the reproductive numbers one month into the epidemic. medRxiv. 2020. https://​doi.​org/​10.​1101/​2020.​04.​08.​20056861.
9.
go back to reference Herzog SA, De Bie J, Abrams S, Wouters I, Ekinci E, Patteet L, Coppens A, De Spiegeleer S, Beutels P, Van Damme P, Hens N, Theeten H. Seroprevalence of igg antibodies against sars coronavirus 2 in Belgium - a serial prospective cross-sectional nationwide study of residual samples. medRxiv. 2021. https://doi.org/10.1101/2020.06.08.20125179. Herzog SA, De Bie J, Abrams S, Wouters I, Ekinci E, Patteet L, Coppens A, De Spiegeleer S, Beutels P, Van Damme P, Hens N, Theeten H. Seroprevalence of igg antibodies against sars coronavirus 2 in Belgium - a serial prospective cross-sectional nationwide study of residual samples. medRxiv. 2021. https://​doi.​org/​10.​1101/​2020.​06.​08.​20125179.
10.
go back to reference Aleta A, Martin-Corral D, Pastore y Piontti A, Ajelli M, Litvinova M, Chinazzi M, Dean NE, Halloran ME, Longini IM, Merler S, Pentland A, Vespignani A, Moro E, Moreno Y. Modeling the impact of social distancing, testing, contact tracing and household quarantine on second-wave scenarios of the COVID-19 epidemic. medRxiv. 2020. https://doi.org/10.1101/2020.05.06.20092841. Aleta A, Martin-Corral D, Pastore y Piontti A, Ajelli M, Litvinova M, Chinazzi M, Dean NE, Halloran ME, Longini IM, Merler S, Pentland A, Vespignani A, Moro E, Moreno Y. Modeling the impact of social distancing, testing, contact tracing and household quarantine on second-wave scenarios of the COVID-19 epidemic. medRxiv. 2020. https://​doi.​org/​10.​1101/​2020.​05.​06.​20092841.
21.
go back to reference Guan W-J, Ni Z-Y, Hu Y, Liang W-H, Ou C-Q, He J-X, Liu L, Shan H, Lei C-L, Hui DSC, Du B, Li L-J, Zeng G, Yuen K-Y, Chen R-C, Tang C-L, Wang T, Chen P-Y, Xiang J, Li S-Y, Wang J-L, Liang Z-J, Peng Y-X, Wei L, Liu Y, Hu Y-H, Peng P, Wang J-M, Liu J-Y, Chen Z, Li G, Zheng Z-J, Qiu S-Q, Luo J, Ye C-J, Zhu S-Y, Zhong N-S. Clinical characteristics of coronavirus disease 2019 in China. N Engl J Med. 2020; 382(18):1708–20. https://doi.org/10.1056/NEJMoa2002032.CrossRef Guan W-J, Ni Z-Y, Hu Y, Liang W-H, Ou C-Q, He J-X, Liu L, Shan H, Lei C-L, Hui DSC, Du B, Li L-J, Zeng G, Yuen K-Y, Chen R-C, Tang C-L, Wang T, Chen P-Y, Xiang J, Li S-Y, Wang J-L, Liang Z-J, Peng Y-X, Wei L, Liu Y, Hu Y-H, Peng P, Wang J-M, Liu J-Y, Chen Z, Li G, Zheng Z-J, Qiu S-Q, Luo J, Ye C-J, Zhu S-Y, Zhong N-S. Clinical characteristics of coronavirus disease 2019 in China. N Engl J Med. 2020; 382(18):1708–20. https://​doi.​org/​10.​1056/​NEJMoa2002032.CrossRef
22.
go back to reference Hellewell J, Abbott S, Gimma A, Bosse NI, Jarvis CI, Russell TW, Munday JD, Kucharski AJ, Edmunds WJ, Sun F, Flasche S, Quilty BJ, Davies N, Liu Y, Clifford S, Klepac P, Jit M, Diamond C, Gibbs H, van Zandvoort K, Funk S, Eggo RM. Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. Lancet Glob Health. 2020; 8(4):488–96. https://doi.org/10.1016/S2214-109X(20)30074-7.CrossRef Hellewell J, Abbott S, Gimma A, Bosse NI, Jarvis CI, Russell TW, Munday JD, Kucharski AJ, Edmunds WJ, Sun F, Flasche S, Quilty BJ, Davies N, Liu Y, Clifford S, Klepac P, Jit M, Diamond C, Gibbs H, van Zandvoort K, Funk S, Eggo RM. Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. Lancet Glob Health. 2020; 8(4):488–96. https://​doi.​org/​10.​1016/​S2214-109X(20)30074-7.CrossRef
25.
go back to reference Wallinga J, Teunis P, Kretzschmar M. Using data on social contacts to estimate age-specific transmission parameters for respiratory-spread infectious agents. Am J Epidemiol. 2006; 164(10):936–44.CrossRef Wallinga J, Teunis P, Kretzschmar M. Using data on social contacts to estimate age-specific transmission parameters for respiratory-spread infectious agents. Am J Epidemiol. 2006; 164(10):936–44.CrossRef
29.
go back to reference Bi Q, Wu Y, Mei S, Ye C, Zou X, Zhang Z, Liu X, Wei L, Truelove SA, Zhang T, Gao W, Cheng C, Tang X, Wu X, Wu Y, Sun B, Huang S, Sun Y, Zhang J, Ma T, Lessler J, Feng T. Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study. Lancet Infect Dis. 2020; 3099(20):1–9. https://doi.org/10.1016/S1473-3099(20)30287-5. Bi Q, Wu Y, Mei S, Ye C, Zou X, Zhang Z, Liu X, Wei L, Truelove SA, Zhang T, Gao W, Cheng C, Tang X, Wu X, Wu Y, Sun B, Huang S, Sun Y, Zhang J, Ma T, Lessler J, Feng T. Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study. Lancet Infect Dis. 2020; 3099(20):1–9. https://​doi.​org/​10.​1016/​S1473-3099(20)30287-5.
33.
go back to reference Kucirka LM, Lauer SA, Laeyendecker O, Boon D, Lessler J. Variation in false-negative rate of reverse transcriptase polymerase chain reaction–based sars-cov-2 tests by time since exposure. Ann Intern Med. https://doi.org/10.7326/M20-1495. Kucirka LM, Lauer SA, Laeyendecker O, Boon D, Lessler J. Variation in false-negative rate of reverse transcriptase polymerase chain reaction–based sars-cov-2 tests by time since exposure. Ann Intern Med. https://​doi.​org/​10.​7326/​M20-1495.
35.
go back to reference Jit M, Jombart T, Nightingale ES, Endo A, Abbott S, LSHTM Centre for Mathematical Modelling of Infectious Diseases COVID-19 Working Group, Edmunds WJ. Estimating number of cases and spread of coronavirus disease (COVID-19) using critical care admissions, united kingdom, february to march 2020. Eurosurveillance. 2020; 25(18). https://doi.org/10.2807/1560-7917.ES.2020.25.18.2000632. Jit M, Jombart T, Nightingale ES, Endo A, Abbott S, LSHTM Centre for Mathematical Modelling of Infectious Diseases COVID-19 Working Group, Edmunds WJ. Estimating number of cases and spread of coronavirus disease (COVID-19) using critical care admissions, united kingdom, february to march 2020. Eurosurveillance. 2020; 25(18). https://​doi.​org/​10.​2807/​1560-7917.​ES.​2020.​25.​18.​2000632.
36.
go back to reference Zhao S, Lin Q, Ran J, Musa SS, Yang G, Wang W, Lou Y, Gao D, Yang L, He D, Wang MH. Preliminary estimation of the basic reproduction number of novel coronavirus (2019-ncov) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak. Int J Infect Dis. 2020; 92:214–7. https://doi.org/10.1016/j.ijid.2020.01.050.CrossRef Zhao S, Lin Q, Ran J, Musa SS, Yang G, Wang W, Lou Y, Gao D, Yang L, He D, Wang MH. Preliminary estimation of the basic reproduction number of novel coronavirus (2019-ncov) in China, from 2019 to 2020: A data-driven analysis in the early phase of the outbreak. Int J Infect Dis. 2020; 92:214–7. https://​doi.​org/​10.​1016/​j.​ijid.​2020.​01.​050.CrossRef
43.
go back to reference Held L. A discussion and reanalysis of the results reported in Jones et al (2020): "An analysis of SARS-CoV-2 viral load by patient age". 2020. https://osf.io/bkuar/. Accessed 24 Apr 2021. Held L. A discussion and reanalysis of the results reported in Jones et al (2020): "An analysis of SARS-CoV-2 viral load by patient age". 2020. https://​osf.​io/​bkuar/​. Accessed 24 Apr 2021.
44.
go back to reference Stoye J. A critical assessment of some recent work on COVID-19. 2020. http://arxiv.org/abs/2005.10237. Accessed 24 Apr 2021. Stoye J. A critical assessment of some recent work on COVID-19. 2020. http://​arxiv.​org/​abs/​2005.​10237.​ Accessed 24 Apr 2021.
52.
go back to reference Abrams S, Wambua J, Santermans E, Willem L, Kuylen E, Coletti P, Libin P, Faes C, Petrof O, Herzog SA, Beutels P, Hens N. Modeling the early phase of the Belgium COVID-19 epidemic using a stochastic compartmental model and studying its implied future trajectories. Epidemics. 2021:100449. https://doi.org/10.1016/j.epidem.2021.100449. Abrams S, Wambua J, Santermans E, Willem L, Kuylen E, Coletti P, Libin P, Faes C, Petrof O, Herzog SA, Beutels P, Hens N. Modeling the early phase of the Belgium COVID-19 epidemic using a stochastic compartmental model and studying its implied future trajectories. Epidemics. 2021:100449. https://​doi.​org/​10.​1016/​j.​epidem.​2021.​100449.
53.
go back to reference Faes C, Abrams S, Van Beckhoven D, Meyfroidt G, Vlieghe E, Hens N, Belgian Collaborative, Group on COVID-19 Hospital Surveillance. Time between Symptom Onset, Hospitalisation and Recovery or Death: Statistical Analysis of Belgian COVID-19 Patients. Int J Environ Res Public Health. 2020; 17:7560. https://doi.org/10.3390/ijerph17207560.CrossRef Faes C, Abrams S, Van Beckhoven D, Meyfroidt G, Vlieghe E, Hens N, Belgian Collaborative, Group on COVID-19 Hospital Surveillance. Time between Symptom Onset, Hospitalisation and Recovery or Death: Statistical Analysis of Belgian COVID-19 Patients. Int J Environ Res Public Health. 2020; 17:7560. https://​doi.​org/​10.​3390/​ijerph17207560.CrossRef
58.
go back to reference Den Boon S, Jit M, Brisson M, Medley G, Beutels P, White R, Flasche S, Hollingsworth TD, Garske T, Pitzer VE, Hoogendoorn M, Geffen O, Clark A, Kim J, Hutubessy R. Guidelines for multi-model comparisons of the impact of infectious disease interventions. BMC Med. 2019; 17(1):1–13. https://doi.org/10.1186/s12916-019-1403-9.CrossRef Den Boon S, Jit M, Brisson M, Medley G, Beutels P, White R, Flasche S, Hollingsworth TD, Garske T, Pitzer VE, Hoogendoorn M, Geffen O, Clark A, Kim J, Hutubessy R. Guidelines for multi-model comparisons of the impact of infectious disease interventions. BMC Med. 2019; 17(1):1–13. https://​doi.​org/​10.​1186/​s12916-019-1403-9.CrossRef
60.
go back to reference Lauer SA, Grantz KH, Bi Q, Jones FK, Zheng Q, Meredith HR, Azman AS, Reich NG, Lessler J. The Incubation Period of Coronavirus Disease 2019 (COVID-19) From Publicly Reported Confirmed Cases: Estimation and Application. Ann Intern Med. 2020. https://doi.org/10.7326/M20-0504. Lauer SA, Grantz KH, Bi Q, Jones FK, Zheng Q, Meredith HR, Azman AS, Reich NG, Lessler J. The Incubation Period of Coronavirus Disease 2019 (COVID-19) From Publicly Reported Confirmed Cases: Estimation and Application. Ann Intern Med. 2020. https://​doi.​org/​10.​7326/​M20-0504.
63.
go back to reference Nishiura H, Kobayashi T, Suzuki A, Jung SM, Hayashi K, Kinoshita R, Yang Y, Yuan B, Akhmetzhanov AR, Linton NM, Miyama T. Estimation of the asymptomatic ratio of novel coronavirus infections (COVID-19). Int J Infect Dis IJID Off Publ Int Soc Infect Dis. 2020; 94:154–5. https://doi.org/10.1016/j.ijid.2020.03.020. Nishiura H, Kobayashi T, Suzuki A, Jung SM, Hayashi K, Kinoshita R, Yang Y, Yuan B, Akhmetzhanov AR, Linton NM, Miyama T. Estimation of the asymptomatic ratio of novel coronavirus infections (COVID-19). Int J Infect Dis IJID Off Publ Int Soc Infect Dis. 2020; 94:154–5. https://​doi.​org/​10.​1016/​j.​ijid.​2020.​03.​020.
Metadata
Title
A data-driven metapopulation model for the Belgian COVID-19 epidemic: assessing the impact of lockdown and exit strategies
Authors
Pietro Coletti
Pieter Libin
Oana Petrof
Lander Willem
Steven Abrams
Sereina A. Herzog
Christel Faes
Elise Kuylen
James Wambua
Philippe Beutels
Niel Hens
Publication date
01-12-2021
Publisher
BioMed Central
Keyword
COVID-19
Published in
BMC Infectious Diseases / Issue 1/2021
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-021-06092-w

Other articles of this Issue 1/2021

BMC Infectious Diseases 1/2021 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.