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Published in: BMC Medical Research Methodology 1/2017

Open Access 01-12-2017 | Research article

Using Bayesian statistics to estimate the likelihood a new trial will demonstrate the efficacy of a new treatment

Authors: David J. Biau, Samuel Boulezaz, Laurent Casabianca, Moussa Hamadouche, Philippe Anract, Sylvie Chevret

Published in: BMC Medical Research Methodology | Issue 1/2017

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Abstract

Background

The common frequentist approach is limited in providing investigators with appropriate measures for conducting a new trial. To answer such important questions and one has to look at Bayesian statistics.

Methods

As a worked example, we conducted a Bayesian cumulative meta-analysis to summarize the benefit of patient-specific instrumentation on the alignment of total knee replacement from previously published evidence. Data were sourced from Medline, Embase, and Cochrane databases. All randomised controlled comparisons of the effect of patient-specific instrumentation on the coronal alignment of total knee replacement were included. The main outcome was the risk difference measured by the proportion of failures in the control group minus the proportion of failures in the experimental group. Through Bayesian statistics, we estimated cumulatively over publication time of the trial results: the posterior probabilities that the risk difference was more than 5 and 10%; the posterior probabilities that given the results of all previous published trials an additional fictive trial would achieve a risk difference of at least 5%; and the predictive probabilities that observed failure rate differ from 5% across arms.

Results

Thirteen trials were identified including 1092 patients, 554 in the experimental group and 538 in the control group. The cumulative mean risk difference was 0.5% (95% CrI: −5.7%; +4.5%). The posterior probabilities that the risk difference be superior to 5 and 10% was less than 5% after trial #4 and trial #2 respectively. The predictive probability that the difference in failure rates was at least 5% dropped from 45% after the first trial down to 11% after the 13th. Last, only unrealistic trial design parameters could change the overall evidence accumulated to date.

Conclusions

Bayesian probabilities are readily understandable when discussing the relevance of performing a new trial. It provides investigators the current probability that an experimental treatment be superior to a reference treatment. In case a trial is designed, it also provides the predictive probability that this new trial will reach the targeted risk difference in failure rates.

Trial registration

Appendix
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Literature
1.
go back to reference Chalmers I, Bracken MB, Djulbegovic B, Garattini S, Grant J, Gülmezoglu AM, Howells DW, Ioannidis JP, Oliver S. How to increase value and reduce waste when research priorities are set. Lancet. 2014;383(9912):156–65.CrossRefPubMed Chalmers I, Bracken MB, Djulbegovic B, Garattini S, Grant J, Gülmezoglu AM, Howells DW, Ioannidis JP, Oliver S. How to increase value and reduce waste when research priorities are set. Lancet. 2014;383(9912):156–65.CrossRefPubMed
4.
go back to reference Young C, Horton R. Putting clinical trials into context. Lancet. 2005;366(9480):107–8.CrossRef Young C, Horton R. Putting clinical trials into context. Lancet. 2005;366(9480):107–8.CrossRef
5.
6.
go back to reference Clarke M, Hopewell S, Chalmers I. Clinical trials should begin and end with systematic reviews of relevant evidence: 12 years and waiting. Lancet. 2010;376(9734):20–1.CrossRefPubMed Clarke M, Hopewell S, Chalmers I. Clinical trials should begin and end with systematic reviews of relevant evidence: 12 years and waiting. Lancet. 2010;376(9734):20–1.CrossRefPubMed
7.
go back to reference NHS National Institute for Health Research. NIHR Research for Patient Benefit (RfPB) Programme Guidance Information for Applicants. Date of issue: 10 August 2016. p. 14. NHS National Institute for Health Research. NIHR Research for Patient Benefit (RfPB) Programme Guidance Information for Applicants. Date of issue: 10 August 2016. p. 14.
8.
go back to reference Spiegelhalter D, Abrams K, Myles J. Bayesian Approaches to Clinical Trials and Health-care Evaluation. NewYork: Wiley; 2004. Spiegelhalter D, Abrams K, Myles J. Bayesian Approaches to Clinical Trials and Health-care Evaluation. NewYork: Wiley; 2004.
9.
go back to reference Thienpont E, Bellemans J, Delport H, Van Overschelde P, Stuyts B, Brabants K, Victor J. Patient-specific instruments: industry's innovation with a surgeon's interest. Knee Surg Sports Traumatol Arthrosc. 2013;21(10):2227–33.CrossRefPubMed Thienpont E, Bellemans J, Delport H, Van Overschelde P, Stuyts B, Brabants K, Victor J. Patient-specific instruments: industry's innovation with a surgeon's interest. Knee Surg Sports Traumatol Arthrosc. 2013;21(10):2227–33.CrossRefPubMed
10.
go back to reference Liberati A, Altman DG, Tetzlaff J, Mulrow C, Gøtzsche PC, Ioannidis JP, Clarke M, Devereaux PJ, Kleijnen J, Moher D. The PRISMA statement for reporting systematic reviews and meta-analyses of studies that evaluate healthcare interventions: explanation and elaboration. BMJ. 2009;339:b2700.CrossRefPubMedPubMedCentral Liberati A, Altman DG, Tetzlaff J, Mulrow C, Gøtzsche PC, Ioannidis JP, Clarke M, Devereaux PJ, Kleijnen J, Moher D. The PRISMA statement for reporting systematic reviews and meta-analyses of studies that evaluate healthcare interventions: explanation and elaboration. BMJ. 2009;339:b2700.CrossRefPubMedPubMedCentral
11.
go back to reference Higgins JP, Altman DG, Gøtzsche PC, Jüni P, Moher D, Oxman AD, Savovic J, Schulz KF, Weeks L, Sterne JA, Cochrane Bias Methods Group, Cochrane Statistical Methods Group. The Cochrane Collaboration's tool for assessing risk of bias in randomised trials. BMJ. 2011;343:d5928.CrossRefPubMedPubMedCentral Higgins JP, Altman DG, Gøtzsche PC, Jüni P, Moher D, Oxman AD, Savovic J, Schulz KF, Weeks L, Sterne JA, Cochrane Bias Methods Group, Cochrane Statistical Methods Group. The Cochrane Collaboration's tool for assessing risk of bias in randomised trials. BMJ. 2011;343:d5928.CrossRefPubMedPubMedCentral
13.
14.
go back to reference Abane L, Anract P, Boisgard S, Descamps S, Courpied JP, Hamadouche M. A comparison of patient-specific and conventional instrumentation for total knee arthroplasty: a multicentre randomised controlled trial. Bone Joint J. 2015;97-B(1):56–63.CrossRefPubMed Abane L, Anract P, Boisgard S, Descamps S, Courpied JP, Hamadouche M. A comparison of patient-specific and conventional instrumentation for total knee arthroplasty: a multicentre randomised controlled trial. Bone Joint J. 2015;97-B(1):56–63.CrossRefPubMed
15.
go back to reference Boonen B, Schotanus MG, Kerens B, van der Weegen W, van Drumpt RA, Kort NP. Intra-operative results and radiological outcome of conventional and patient-specific surgery in total knee arthroplasty: a multicentre, randomised controlled trial. Knee Surg Sports Traumatol Arthrosc. 2013;21(10):2206–12.CrossRefPubMed Boonen B, Schotanus MG, Kerens B, van der Weegen W, van Drumpt RA, Kort NP. Intra-operative results and radiological outcome of conventional and patient-specific surgery in total knee arthroplasty: a multicentre, randomised controlled trial. Knee Surg Sports Traumatol Arthrosc. 2013;21(10):2206–12.CrossRefPubMed
16.
go back to reference Chareancholvanich K, Narkbunnam R, Pornrattanamaneewong C. A prospective randomised controlled study of patient-specific cutting guides compared with conventional instrumentation in total knee replacement. Bone Joint J. 2013;95-B(3):354–9.CrossRefPubMed Chareancholvanich K, Narkbunnam R, Pornrattanamaneewong C. A prospective randomised controlled study of patient-specific cutting guides compared with conventional instrumentation in total knee replacement. Bone Joint J. 2013;95-B(3):354–9.CrossRefPubMed
17.
go back to reference Chotanaphuti T, Wangwittayakul V, Khuangsirikul S, Foojareonyos T. The accuracy of component alignment in custom cutting blocks compared with conventional total knee arthroplasty instrumentation: prospective control trial. Knee. 2014;21(1):185–8.CrossRefPubMed Chotanaphuti T, Wangwittayakul V, Khuangsirikul S, Foojareonyos T. The accuracy of component alignment in custom cutting blocks compared with conventional total knee arthroplasty instrumentation: prospective control trial. Knee. 2014;21(1):185–8.CrossRefPubMed
18.
go back to reference Hamilton WG, Parks NL, Saxena A. Patient-specific instrumentation does not shorten surgical time: a prospective, randomized trial. J Arthroplast. 2013;28(8 Suppl):96–100.CrossRef Hamilton WG, Parks NL, Saxena A. Patient-specific instrumentation does not shorten surgical time: a prospective, randomized trial. J Arthroplast. 2013;28(8 Suppl):96–100.CrossRef
19.
go back to reference Kotela A, Kotela I. Patient-specific computed tomography based instrumentation in total knee arthroplasty: a prospective randomized controlled study. Int Orthop. 2014;38(10):2099–107.CrossRefPubMed Kotela A, Kotela I. Patient-specific computed tomography based instrumentation in total knee arthroplasty: a prospective randomized controlled study. Int Orthop. 2014;38(10):2099–107.CrossRefPubMed
20.
go back to reference Molicnik A, Naranda J, Dolinar D. Patient-matched instruments versus standard instrumentation in total knee arthroplasty: a prospective randomized study. Wien Klin Wochenschr. 2015;127(Suppl 5):S235–40.CrossRefPubMed Molicnik A, Naranda J, Dolinar D. Patient-matched instruments versus standard instrumentation in total knee arthroplasty: a prospective randomized study. Wien Klin Wochenschr. 2015;127(Suppl 5):S235–40.CrossRefPubMed
21.
go back to reference Parratte S, Blanc G, Boussemart T, Ollivier M, Le Corroller T, Argenson JN. Rotation in total knee arthroplasty: no difference between patient-specific and conventional instrumentation. Knee Surg Sports Traumatol Arthrosc. 2013;21(10):2213–9.CrossRefPubMed Parratte S, Blanc G, Boussemart T, Ollivier M, Le Corroller T, Argenson JN. Rotation in total knee arthroplasty: no difference between patient-specific and conventional instrumentation. Knee Surg Sports Traumatol Arthrosc. 2013;21(10):2213–9.CrossRefPubMed
22.
go back to reference Pfitzner T, Abdel MP, von Roth P, Perka C, Hommel H. Small improvements in mechanical axis alignment achieved with MRI versus CT-based patient-specific instruments in TKA: a randomized clinical trial. Clin Orthop Relat Res. 2014;472(10):2913–22.CrossRefPubMedPubMedCentral Pfitzner T, Abdel MP, von Roth P, Perka C, Hommel H. Small improvements in mechanical axis alignment achieved with MRI versus CT-based patient-specific instruments in TKA: a randomized clinical trial. Clin Orthop Relat Res. 2014;472(10):2913–22.CrossRefPubMedPubMedCentral
23.
go back to reference Roh YW, Kim TW, Lee S, Seong SC, Lee MC. Is TKA using patient-specific instruments comparable to conventional TKA? A randomized controlled study of one system. Clin Orthop Relat Res. 2013;471(12):3988–95.CrossRefPubMedPubMedCentral Roh YW, Kim TW, Lee S, Seong SC, Lee MC. Is TKA using patient-specific instruments comparable to conventional TKA? A randomized controlled study of one system. Clin Orthop Relat Res. 2013;471(12):3988–95.CrossRefPubMedPubMedCentral
24.
go back to reference Victor J, Dujardin J, Vandenneucker H, Arnout N, Bellemans J. Patient-specific guides do not improve accuracy in total knee arthroplasty: a prospective randomized controlled trial. Clin Orthop Relat Res. 2014;472(1):263–71.CrossRefPubMed Victor J, Dujardin J, Vandenneucker H, Arnout N, Bellemans J. Patient-specific guides do not improve accuracy in total knee arthroplasty: a prospective randomized controlled trial. Clin Orthop Relat Res. 2014;472(1):263–71.CrossRefPubMed
25.
go back to reference Woolson ST, Harris AH, Wagner DW, Giori NJ. Component alignment during total knee arthroplasty with use of standard or custom instrumentation: a randomized clinical trial using computed tomography for postoperative alignment measurement. J Bone Joint Surg Am. 2014;96(5):366–72.CrossRefPubMed Woolson ST, Harris AH, Wagner DW, Giori NJ. Component alignment during total knee arthroplasty with use of standard or custom instrumentation: a randomized clinical trial using computed tomography for postoperative alignment measurement. J Bone Joint Surg Am. 2014;96(5):366–72.CrossRefPubMed
26.
go back to reference Yan CH, Chiu KY, Ng FY, Chan PK, Fang CX. Comparison between patient-specific instruments and conventional instruments and computer navigation in total knee arthroplasty: a randomized controlled trial. Knee Surg Sports Traumatol Arthrosc. 2015;23(12):3637–45.CrossRefPubMed Yan CH, Chiu KY, Ng FY, Chan PK, Fang CX. Comparison between patient-specific instruments and conventional instruments and computer navigation in total knee arthroplasty: a randomized controlled trial. Knee Surg Sports Traumatol Arthrosc. 2015;23(12):3637–45.CrossRefPubMed
27.
go back to reference Fergusson D, Glass KC, Hutton B, Shapiro S. Randomized controlled trials of aprotinin in cardiac surgery: could clinical equipoise have stopped the bleeding? Clin Trials. 2005;2(3):218–29. discussion 229-32CrossRefPubMed Fergusson D, Glass KC, Hutton B, Shapiro S. Randomized controlled trials of aprotinin in cardiac surgery: could clinical equipoise have stopped the bleeding? Clin Trials. 2005;2(3):218–29. discussion 229-32CrossRefPubMed
28.
go back to reference Schmidt AF, Klugkist I, Klungel OH, Nielen M, de Boer A, Hoes AW, et al. Bayesian methods including nonrandomized study data increased the efficiency of postlaunch RCTs. J Clin Epidemiol. 2015;68(4):387–96.CrossRefPubMed Schmidt AF, Klugkist I, Klungel OH, Nielen M, de Boer A, Hoes AW, et al. Bayesian methods including nonrandomized study data increased the efficiency of postlaunch RCTs. J Clin Epidemiol. 2015;68(4):387–96.CrossRefPubMed
29.
go back to reference Pereira TV, Horwitz RI, Ioannidis JP. Empirical evaluation of very large treatment effects of medical interventions. JAMA. 2012;308(16):1676–84.CrossRefPubMed Pereira TV, Horwitz RI, Ioannidis JP. Empirical evaluation of very large treatment effects of medical interventions. JAMA. 2012;308(16):1676–84.CrossRefPubMed
31.
go back to reference Robinson KA, Goodman SN. A systematic examination of the citation of prior research in reports of randomized, controlled trials. Ann Intern Med. 2011;154:50–5.CrossRefPubMed Robinson KA, Goodman SN. A systematic examination of the citation of prior research in reports of randomized, controlled trials. Ann Intern Med. 2011;154:50–5.CrossRefPubMed
32.
go back to reference Sarmanov O. Generalized normal correlation and two-dimensional Fréchet classes. Sov Math Dokl. 1966;7:596–9. Sarmanov O. Generalized normal correlation and two-dimensional Fréchet classes. Sov Math Dokl. 1966;7:596–9.
33.
go back to reference Clark T, Berger U, Mansmann U. Sample size determinations in original research protocols for randomised clinical trials submitted to UK research ethics committees: review. BMJ. 2013;346:f1136. Clark T, Berger U, Mansmann U. Sample size determinations in original research protocols for randomised clinical trials submitted to UK research ethics committees: review. BMJ. 2013;346:f1136.
34.
go back to reference Goudie AC, Sutton AJ, Jones DR, Donald A. Empirical assessment suggests that existing evidence could be used more fully in designing randomised controlled trials. J Clin Epidemiol. 2010;63:983–91.CrossRefPubMed Goudie AC, Sutton AJ, Jones DR, Donald A. Empirical assessment suggests that existing evidence could be used more fully in designing randomised controlled trials. J Clin Epidemiol. 2010;63:983–91.CrossRefPubMed
35.
go back to reference Djulbegovic B, Kumar A, Magazin A, Schroen AT, Soares H, Hozo I, Clarke M, Sargent D, Schell MJ. Optimism bias leads to inconclusive results-an empirical study. J Clin Epidemiol. 2011;64(6):583–93.CrossRefPubMed Djulbegovic B, Kumar A, Magazin A, Schroen AT, Soares H, Hozo I, Clarke M, Sargent D, Schell MJ. Optimism bias leads to inconclusive results-an empirical study. J Clin Epidemiol. 2011;64(6):583–93.CrossRefPubMed
36.
go back to reference Chalmers I, Matthews R. What are the implications of optimism bias in clinical research? Lancet. 2006;367(9509):449–50.CrossRefPubMed Chalmers I, Matthews R. What are the implications of optimism bias in clinical research? Lancet. 2006;367(9509):449–50.CrossRefPubMed
37.
go back to reference Ferreira ML, Herbert RD, Crowther MJ, Verhagen A, Sutton AJ. When is a further clinical trial justified? BMJ. 2012;345:e5913.CrossRefPubMed Ferreira ML, Herbert RD, Crowther MJ, Verhagen A, Sutton AJ. When is a further clinical trial justified? BMJ. 2012;345:e5913.CrossRefPubMed
38.
go back to reference Howard G, Coffey CS, Cutter GR. Is Bayesian analysis ready for use in phase III randomized clinical trials? Beware the sound of the sirens. Stroke. 2005;36(7):1622–3.CrossRefPubMed Howard G, Coffey CS, Cutter GR. Is Bayesian analysis ready for use in phase III randomized clinical trials? Beware the sound of the sirens. Stroke. 2005;36(7):1622–3.CrossRefPubMed
Metadata
Title
Using Bayesian statistics to estimate the likelihood a new trial will demonstrate the efficacy of a new treatment
Authors
David J. Biau
Samuel Boulezaz
Laurent Casabianca
Moussa Hamadouche
Philippe Anract
Sylvie Chevret
Publication date
01-12-2017
Publisher
BioMed Central
Published in
BMC Medical Research Methodology / Issue 1/2017
Electronic ISSN: 1471-2288
DOI
https://doi.org/10.1186/s12874-017-0401-x

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