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Published in: Malaria Journal 1/2018

Open Access 01-12-2018 | Research

Stochastic lattice-based modelling of malaria dynamics

Authors: Phong V. V. Le, Praveen Kumar, Marilyn O. Ruiz

Published in: Malaria Journal | Issue 1/2018

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Abstract

Background

The transmission of malaria is highly variable and depends on a range of climatic and anthropogenic factors. In addition, the dispersal of Anopheles mosquitoes is a key determinant that affects the persistence and dynamics of malaria. Simple, lumped-population models of malaria prevalence have been insufficient for predicting the complex responses of malaria to environmental changes.

Methods and results

A stochastic lattice-based model that couples a mosquito dispersal and a susceptible-exposed-infected-recovered epidemics model was developed for predicting the dynamics of malaria in heterogeneous environments. The It\(\hat{o}\) approximation of stochastic integrals with respect to Brownian motion was used to derive a model of stochastic differential equations. The results show that stochastic equations that capture uncertainties in the life cycle of mosquitoes and interactions among vectors, parasites, and hosts provide a mechanism for the disruptions of malaria. Finally, model simulations for a case study in the rural area of Kilifi county, Kenya are presented.

Conclusions

A stochastic lattice-based integrated malaria model has been developed. The applicability of the model for capturing the climate-driven hydrologic factors and demographic variability on malaria transmission has been demonstrated.
Literature
1.
go back to reference Miller LH, Baruch DI, Marsh K, Doumbo OK. The pathogenic basis of malaria. Nature. 2002;415:673–9.CrossRefPubMed Miller LH, Baruch DI, Marsh K, Doumbo OK. The pathogenic basis of malaria. Nature. 2002;415:673–9.CrossRefPubMed
2.
go back to reference Smith DL, McKenzie EF. Statics and dynamics of malaria infection in Anopheles mosquitoes. Malar J. 2004;3:1–14.CrossRef Smith DL, McKenzie EF. Statics and dynamics of malaria infection in Anopheles mosquitoes. Malar J. 2004;3:1–14.CrossRef
3.
go back to reference Anderson RM. The population dynamics of infectious diseases: theory and applications. Population and community biology series. London: Chapman & Hall Ltd.; 1982.CrossRef Anderson RM. The population dynamics of infectious diseases: theory and applications. Population and community biology series. London: Chapman & Hall Ltd.; 1982.CrossRef
4.
go back to reference Anderson RM, May RM. Infectious diseases of humans: dynamics and control. Dynamics and control. Oxford: Oxford University Press; 1992. Anderson RM, May RM. Infectious diseases of humans: dynamics and control. Dynamics and control. Oxford: Oxford University Press; 1992.
5.
go back to reference Paaijmans KP, Thomas MB. Health: wealth versus warming. Nat Clim Change. 2011;1:349–50.CrossRef Paaijmans KP, Thomas MB. Health: wealth versus warming. Nat Clim Change. 2011;1:349–50.CrossRef
6.
go back to reference Caminade C, Kovats S, Rocklov J, Tompkins AM, Morse AP, Colón-González FJ, et al. Impact of climate change on global malaria distribution. Proc Natl Acad Sci USA. 2014;111:3286–91.CrossRefPubMed Caminade C, Kovats S, Rocklov J, Tompkins AM, Morse AP, Colón-González FJ, et al. Impact of climate change on global malaria distribution. Proc Natl Acad Sci USA. 2014;111:3286–91.CrossRefPubMed
7.
go back to reference Ross R. The prevention of malaria. 2nd ed. Dutton; 1910. Ross R. The prevention of malaria. 2nd ed. Dutton; 1910.
8.
go back to reference MacDonald G. The Epidemiology and Control of Malaria. Oxford Medical Publications. Oxford, UK: Oxford University Press; 1957. MacDonald G. The Epidemiology and Control of Malaria. Oxford Medical Publications. Oxford, UK: Oxford University Press; 1957.
9.
go back to reference Ngwa GA, Shu WS. A mathematical model for endemic malaria with variable human and mosquito populations. Math Comput Model. 2000;32:747–63.CrossRef Ngwa GA, Shu WS. A mathematical model for endemic malaria with variable human and mosquito populations. Math Comput Model. 2000;32:747–63.CrossRef
10.
go back to reference Chitnis N, Cushing J, Hyman J. Bifurcation analysis of a mathematical model for malaria transmission. SIAM J Appl Math. 2006;67:24–45.CrossRef Chitnis N, Cushing J, Hyman J. Bifurcation analysis of a mathematical model for malaria transmission. SIAM J Appl Math. 2006;67:24–45.CrossRef
11.
go back to reference Yang HM. Malaria transmission model for different levels of acquired immunity and temperature-dependent parameters (vector). Rev Saude Publica. 2000;34:223–31.CrossRefPubMed Yang HM. Malaria transmission model for different levels of acquired immunity and temperature-dependent parameters (vector). Rev Saude Publica. 2000;34:223–31.CrossRefPubMed
12.
go back to reference Filipe JAN, Riley EM, Drakeley CJ, Sutherland CJ, Ghani AC. Determination of the processes driving the acquisition of immunity to malaria using a mathematical transmission model. PLoS Comput Biol. 2007;3:e255.CrossRefPubMedPubMedCentral Filipe JAN, Riley EM, Drakeley CJ, Sutherland CJ, Ghani AC. Determination of the processes driving the acquisition of immunity to malaria using a mathematical transmission model. PLoS Comput Biol. 2007;3:e255.CrossRefPubMedPubMedCentral
13.
go back to reference Parham PE, Michael E. Modeling the effects of weather and climate change on malaria transmission. Environ Health Perspect. 2010;118:620–6.CrossRefPubMed Parham PE, Michael E. Modeling the effects of weather and climate change on malaria transmission. Environ Health Perspect. 2010;118:620–6.CrossRefPubMed
14.
go back to reference Ariey F, Duchemin JB, Robert V. Metapopulation concepts applied to falciparum malaria and their impacts on the emergence and spread of chloroquine resistance. Infect Genet Evol. 2003;2:185–92.CrossRefPubMed Ariey F, Duchemin JB, Robert V. Metapopulation concepts applied to falciparum malaria and their impacts on the emergence and spread of chloroquine resistance. Infect Genet Evol. 2003;2:185–92.CrossRefPubMed
15.
go back to reference Bomblies A, Duchemin JB, Eltahir EAB. Hydrology of malaria: model development and application to a Sahelian village. Water Resour Res. 2008;44:W12445.CrossRef Bomblies A, Duchemin JB, Eltahir EAB. Hydrology of malaria: model development and application to a Sahelian village. Water Resour Res. 2008;44:W12445.CrossRef
17.
go back to reference Arifin SN, Zhou Y, Davis GJ, Gentile JE, Madey GR, Collins FH. An agent-based model of the population dynamics of Anopheles gambiae. Malar J. 2014;13:1–20.CrossRef Arifin SN, Zhou Y, Davis GJ, Gentile JE, Madey GR, Collins FH. An agent-based model of the population dynamics of Anopheles gambiae. Malar J. 2014;13:1–20.CrossRef
18.
go back to reference Pizzitutti F, Pan W, Barbieri A, Miranda JJ, Feingold B, Guedes GR, et al. A validated agent-based model to study the spatial and temporal heterogeneities of malaria incidence in the rainforest environment. Malar J. 2015;14:1–19.CrossRef Pizzitutti F, Pan W, Barbieri A, Miranda JJ, Feingold B, Guedes GR, et al. A validated agent-based model to study the spatial and temporal heterogeneities of malaria incidence in the rainforest environment. Malar J. 2015;14:1–19.CrossRef
20.
go back to reference Reiner RC, Perkins TA, Barker CM, et al. A systematic review of mathematical models of mosquito-borne pathogen transmission: 1970–2010. J R Soc Interface. 2013;10:20120921.CrossRefPubMedPubMedCentral Reiner RC, Perkins TA, Barker CM, et al. A systematic review of mathematical models of mosquito-borne pathogen transmission: 1970–2010. J R Soc Interface. 2013;10:20120921.CrossRefPubMedPubMedCentral
21.
go back to reference Smith DL, Perkins TA, Reiner RC, Barker CM, Niu T, Chaves LF, et al. Recasting the theory of mosquito-borne pathogen transmission dynamics and control. Trans R Soc Trop Med Hyg. 2014;108:185–97.CrossRefPubMedPubMedCentral Smith DL, Perkins TA, Reiner RC, Barker CM, Niu T, Chaves LF, et al. Recasting the theory of mosquito-borne pathogen transmission dynamics and control. Trans R Soc Trop Med Hyg. 2014;108:185–97.CrossRefPubMedPubMedCentral
22.
go back to reference Keeling MJ, Rohani P. Modeling infectious diseases in humans and animals. Princeton: Princeton University Press; 2008. Keeling MJ, Rohani P. Modeling infectious diseases in humans and animals. Princeton: Princeton University Press; 2008.
23.
go back to reference Azaele S, Maritan A, Bertuzzo E, Rodriguez-Iturbe I, Rinaldo A. Stochastic dynamics of cholera epidemics. Phys Rev E. 2010;81:051901.CrossRef Azaele S, Maritan A, Bertuzzo E, Rodriguez-Iturbe I, Rinaldo A. Stochastic dynamics of cholera epidemics. Phys Rev E. 2010;81:051901.CrossRef
24.
go back to reference Herwaarden OA, Grasman J. Stochastic epidemics: major outbreaks and the duration of the endemic period. J Math Biol. 1995;33:581–601.CrossRefPubMed Herwaarden OA, Grasman J. Stochastic epidemics: major outbreaks and the duration of the endemic period. J Math Biol. 1995;33:581–601.CrossRefPubMed
25.
go back to reference van Herwaarden AO. Stochastic epidemics: the probability of extinction of an infectious disease at the end of a major outbreak. J Math Biol. 1997;35:793–813.CrossRefPubMed van Herwaarden AO. Stochastic epidemics: the probability of extinction of an infectious disease at the end of a major outbreak. J Math Biol. 1997;35:793–813.CrossRefPubMed
27.
go back to reference Krstic M. The effect of stochastic perturbation on a nonlinear delay malaria epidemic model. Math Comput Simul. 2011;82:558–69.CrossRef Krstic M. The effect of stochastic perturbation on a nonlinear delay malaria epidemic model. Math Comput Simul. 2011;82:558–69.CrossRef
28.
go back to reference Lutambi AM, Penny MA, Smith T, Chitnis N. Mathematical modelling of mosquito dispersal in a heterogeneous environment. Math Biosci. 2013;241:198–216.CrossRefPubMed Lutambi AM, Penny MA, Smith T, Chitnis N. Mathematical modelling of mosquito dispersal in a heterogeneous environment. Math Biosci. 2013;241:198–216.CrossRefPubMed
29.
go back to reference Depinay JM, Mbogo C, Killeen G, Knols B, Beier J, Carlson J, et al. A simulation model of African Anopheles ecology and population dynamics for the analysis of malaria transmission. Malar J. 2004;3:29.CrossRefPubMedPubMedCentral Depinay JM, Mbogo C, Killeen G, Knols B, Beier J, Carlson J, et al. A simulation model of African Anopheles ecology and population dynamics for the analysis of malaria transmission. Malar J. 2004;3:29.CrossRefPubMedPubMedCentral
30.
go back to reference Allen E. Modeling with Itô Stochastic differential equations. Mathematical modelling: theory and applications. Heidelberg, Germany: Springer Berlin Heidelberg; 2007. Allen E. Modeling with Itô Stochastic differential equations. Mathematical modelling: theory and applications. Heidelberg, Germany: Springer Berlin Heidelberg; 2007.
31.
go back to reference Allen LJS. An introduction to stochastic processes with applications to biology. 2nd ed. Florida: CRC Press; 2010. Allen LJS. An introduction to stochastic processes with applications to biology. 2nd ed. Florida: CRC Press; 2010.
33.
go back to reference Detinova TS. Age-grouping methods in Diptera of medical importance with special reference to some vectors of malaria. WHO Monograph series. 1962;47:13–191.PubMed Detinova TS. Age-grouping methods in Diptera of medical importance with special reference to some vectors of malaria. WHO Monograph series. 1962;47:13–191.PubMed
34.
go back to reference Briere JF, Pracros P, Le Roux AY, Pierre JS. A novel rate model of temperature-dependent development for arthropods. Environ Entomol. 1999;28:22–9.CrossRef Briere JF, Pracros P, Le Roux AY, Pierre JS. A novel rate model of temperature-dependent development for arthropods. Environ Entomol. 1999;28:22–9.CrossRef
35.
go back to reference Paaijmans KP, Read AF, Thomas MB. Understanding the link between malaria risk and climate. Proc Natl Acad Sci USA. 2009;106:13844–9.CrossRefPubMed Paaijmans KP, Read AF, Thomas MB. Understanding the link between malaria risk and climate. Proc Natl Acad Sci USA. 2009;106:13844–9.CrossRefPubMed
36.
go back to reference Le PVV, Kumar P. Interaction between ecohydrologic dynamics and microtopographic variability under climate change. Water Resour Res. 2017;53:8383–403.CrossRef Le PVV, Kumar P. Interaction between ecohydrologic dynamics and microtopographic variability under climate change. Water Resour Res. 2017;53:8383–403.CrossRef
37.
go back to reference Drewry DT, Kumar P, Long S, Bernacchi C, Liang XZ, Sivapalan M. Ecohydrological responses of dense canopies to environmental variability: 1. Interplay between vertical structure and photosynthetic pathway. J Geophys Res. 2010;115:G04022. Drewry DT, Kumar P, Long S, Bernacchi C, Liang XZ, Sivapalan M. Ecohydrological responses of dense canopies to environmental variability: 1. Interplay between vertical structure and photosynthetic pathway. J Geophys Res. 2010;115:G04022.
38.
go back to reference Le PVV, Kumar P, Drewry DT, Quijano JC. A graphical user interface for numerical modeling of acclimation responses of vegetation to climate change. Comput Geosci. 2012;49:91–101.CrossRef Le PVV, Kumar P, Drewry DT, Quijano JC. A graphical user interface for numerical modeling of acclimation responses of vegetation to climate change. Comput Geosci. 2012;49:91–101.CrossRef
39.
go back to reference Le PVV, Kumar P, Drewry DT. Implications for the hydrologic cycle under climate change due to the expansion of bioenergy crops in the Midwestern United States. Proc Natl Acad Sci USA. 2011;108:15085–90.CrossRefPubMed Le PVV, Kumar P, Drewry DT. Implications for the hydrologic cycle under climate change due to the expansion of bioenergy crops in the Midwestern United States. Proc Natl Acad Sci USA. 2011;108:15085–90.CrossRefPubMed
40.
go back to reference Le PVV, Kumar P, Valocchi AJ, Dang HV. GPU-based high-performance computing for integrated surface-sub-surface flow modeling. Environ Modell Softw. 2015;73:1–13.CrossRef Le PVV, Kumar P, Valocchi AJ, Dang HV. GPU-based high-performance computing for integrated surface-sub-surface flow modeling. Environ Modell Softw. 2015;73:1–13.CrossRef
41.
go back to reference Le PVV, Kumar P. Power law scaling of topographic depressions and their hydrologic connectivity. Geophys Res Lett. 2014;41:1553–9.CrossRef Le PVV, Kumar P. Power law scaling of topographic depressions and their hydrologic connectivity. Geophys Res Lett. 2014;41:1553–9.CrossRef
42.
go back to reference Nyakeriga AM, Troye-Blomberg M, Chemtai AK, Marsh K, Williams TN. Malaria and nutritional status in children living on the coast of Kenya. Am J Clin Nutr. 2004;80:1604–10.CrossRefPubMed Nyakeriga AM, Troye-Blomberg M, Chemtai AK, Marsh K, Williams TN. Malaria and nutritional status in children living on the coast of Kenya. Am J Clin Nutr. 2004;80:1604–10.CrossRefPubMed
43.
go back to reference Snow RW, Kibuchi E, Karuri SW, Sang G, Gitonga CW, Mwandawiro C, et al. Changing malaria prevalence on the Kenyan Coast since 1974: climate, drugs and vector control. PLoS ONE. 2015;10:1–14. Snow RW, Kibuchi E, Karuri SW, Sang G, Gitonga CW, Mwandawiro C, et al. Changing malaria prevalence on the Kenyan Coast since 1974: climate, drugs and vector control. PLoS ONE. 2015;10:1–14.
44.
go back to reference Mogeni P, Williams TN, Fegan G, Nyundo C, Bauni E, Mwai K, et al. Age, spatial, and temporal variations in hospital admissions with malaria in Kilifi County, Kenya: a 25-year longitudinal observational study. PLoS Med. 2016;13:1–17.CrossRef Mogeni P, Williams TN, Fegan G, Nyundo C, Bauni E, Mwai K, et al. Age, spatial, and temporal variations in hospital admissions with malaria in Kilifi County, Kenya: a 25-year longitudinal observational study. PLoS Med. 2016;13:1–17.CrossRef
45.
go back to reference Le PVV, Kumar P, Ruiz MO, Mbogo C, Muturi JE. Predicting the direct and indirect impacts of climate change on malaria in coastal Kenya. PLOS (under review). 2018. Le PVV, Kumar P, Ruiz MO, Mbogo C, Muturi JE. Predicting the direct and indirect impacts of climate change on malaria in coastal Kenya. PLOS (under review). 2018.
46.
go back to reference Tatem AJ, Noor AM, von Hagen C, Di Gregorio A, Hay SI. High resolution population maps for low income nations: combining land cover and census in East Africa. PLoS ONE. 2007;2:1–8.CrossRef Tatem AJ, Noor AM, von Hagen C, Di Gregorio A, Hay SI. High resolution population maps for low income nations: combining land cover and census in East Africa. PLoS ONE. 2007;2:1–8.CrossRef
Metadata
Title
Stochastic lattice-based modelling of malaria dynamics
Authors
Phong V. V. Le
Praveen Kumar
Marilyn O. Ruiz
Publication date
01-12-2018
Publisher
BioMed Central
Published in
Malaria Journal / Issue 1/2018
Electronic ISSN: 1475-2875
DOI
https://doi.org/10.1186/s12936-018-2397-z

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