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Archives of Virology
Published in: Archives of Virology 4/2016

01-04-2016 | Annotated Sequence Record

Molecular characterization of a novel capillovirus from red currant

Authors: Karel Petrzik, Jaroslava Přibylová, Igor Koloniuk, Josef Špak

Published in: Archives of Virology | Issue 4/2016

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Abstract

The complete nucleotide sequence of a novel virus from red currant, provisionally named currant virus A (CuVA), was determined. The genome is 7925 nucleotides long and has a 3′-poly(A) tail. The genome organization with two overlapping open reading frames is similar to that of capilloviruses, but the CuVA genome is about 600 nucleotides longer than that of the longest known capillovirus, cherry virus A. The RNA is predicted to encode a polyprotein with domains of methyltransferase, 2OG-Fe(II) oxygenase, papain-like protease, RNA helicase, RdRp, and capsid protein. Phylogenetic analysis confirms that CuVA is a new and distinct member of the genus Capillovirus.
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Metadata
Title
Molecular characterization of a novel capillovirus from red currant
Authors
Karel Petrzik
Jaroslava Přibylová
Igor Koloniuk
Josef Špak
Publication date
01-04-2016
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 4/2016
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-016-2752-8

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