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Open Access 01-12-2018 | Research

Plasma virome of cattle from forest region revealed diverse small circular ssDNA viral genomes

Authors: Hao Wang, Shouxin Li, Asif Mahmood, Shixing Yang, Xiaochun Wang, Quan Shen, Tongling Shan, Xutao Deng, Jingjiao Li, Xiuguo Hua, Li Cui, Eric Delwart, Wen Zhang

Published in: Virology Journal | Issue 1/2018

Abstract

Background

Free-range cattle are common in the Northeast China area, which have close contact with farmers and may carry virus threatening to cattle and farmers.

Methods

Using viral metagenomics we analyzed the virome in plasma samples collected from 80 cattle from the forested region of Northeast China.

Results

The virome of cattle plasma is composed of the viruses belonging to the families including Parvoviridae, Papillomaviridae, Picobirnaviridae, and divergent viral genomes showing sequence similarity to circular Rep-encoding single stranded (CRESS) DNA viruses. Five such CRESS-DNA genomes were full characterized, with Rep sequences related to circovirus and gemycircularvirus. Three bovine parvoviruses belonging to two different genera were also characterized.

Conclusion

The virome in plasma samples of cattle from the forested region of Northeast China was revealed, which further characterized the diversity of viruses in cattle plasma.

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Title: Plasma virome of cattle from forest region revealed diverse small circular ssDNA viral genomes
Authors: Hao Wang
Shouxin Li
Asif Mahmood
Shixing Yang
Xiaochun Wang
Quan Shen
Tongling Shan
Xutao Deng
Jingjiao Li
Xiuguo Hua
Li Cui
Eric Delwart
Wen Zhang
Publication date: 01-12-2018
Publisher: BioMed Central
Published in: Virology Journal / Issue 1/2018
Electronic ISSN: 1743-422X
DOI: https://doi.org/10.1186/s12985-018-0923-9

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Plasma virome of cattle from forest region revealed diverse small circular ssDNA viral genomes

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Methods

Results

Conclusion

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Conclusion

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