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Published in: BMC Medical Informatics and Decision Making 1/2019

Open Access 01-12-2019 | Schizophrenia | Research article

Predicting hospital-acquired pneumonia among schizophrenic patients: a machine learning approach

Authors: Kuang Ming Kuo, Paul C. Talley, Chi Hsien Huang, Liang Chih Cheng

Published in: BMC Medical Informatics and Decision Making | Issue 1/2019

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Abstract

Background

Medications are frequently used for treating schizophrenia, however, anti-psychotic drug use is known to lead to cases of pneumonia. The purpose of our study is to build a model for predicting hospital-acquired pneumonia among schizophrenic patients by adopting machine learning techniques.

Methods

Data related to a total of 185 schizophrenic in-patients at a Taiwanese district mental hospital diagnosed with pneumonia between 2013 ~ 2018 were gathered. Eleven predictors, including gender, age, clozapine use, drug-drug interaction, dosage, duration of medication, coughing, change of leukocyte count, change of neutrophil count, change of blood sugar level, change of body weight, were used to predict the onset of pneumonia. Seven machine learning algorithms, including classification and regression tree, decision tree, k-nearest neighbors, naïve Bayes, random forest, support vector machine, and logistic regression were utilized to build predictive models used in this study. Accuracy, area under receiver operating characteristic curve, sensitivity, specificity, and kappa were used to measure overall model performance.

Results

Among the seven adopted machine learning algorithms, random forest and decision tree exhibited the optimal predictive accuracy versus the remaining algorithms. Further, six most important risk factors, including, dosage, clozapine use, duration of medication, change of neutrophil count, change of leukocyte count, and drug-drug interaction, were also identified.

Conclusions

Although schizophrenic patients remain susceptible to the threat of pneumonia whenever treated with anti-psychotic drugs, our predictive model may serve as a useful support tool for physicians treating such patients.
Literature
1.
go back to reference Birnbaum HG, Morley M, Greenberg PE, Cifaldi M, Colice GL. Economic burden of pneumonia in an employed population. Arch Intern Med. 2001;161(22):2725–31.CrossRef Birnbaum HG, Morley M, Greenberg PE, Cifaldi M, Colice GL. Economic burden of pneumonia in an employed population. Arch Intern Med. 2001;161(22):2725–31.CrossRef
2.
go back to reference Mortensen EM, Coley CM, Singer DE, Marrie TJ, Obrosky DS, Kapoor WN, Fine MJ. Causes of death for patients with community-acquired pneumonia: results from the pneumonia patient outcomes research team cohort study. Arch Intern Med. 2002;162(9):1059–64.CrossRef Mortensen EM, Coley CM, Singer DE, Marrie TJ, Obrosky DS, Kapoor WN, Fine MJ. Causes of death for patients with community-acquired pneumonia: results from the pneumonia patient outcomes research team cohort study. Arch Intern Med. 2002;162(9):1059–64.CrossRef
4.
go back to reference Nicholl D, Akhras KS, Diels J, Schadrack J. Burden of schizophrenia in recently diagnosed patients: healthcare utilisation and cost perspective. Curr Med Res Opin. 2010;26(4):943–55.CrossRef Nicholl D, Akhras KS, Diels J, Schadrack J. Burden of schizophrenia in recently diagnosed patients: healthcare utilisation and cost perspective. Curr Med Res Opin. 2010;26(4):943–55.CrossRef
5.
go back to reference Kuo CJ, Yang SY, Liao YT, Chen WJ, Lee WC, Shau WY, Chang YT, Tsai SY, Chen CC. Second-generation antipsychotic medications and risk of pneumonia in schizophrenia. Schizophrenia Bull. 2013;39(3):648–57.CrossRef Kuo CJ, Yang SY, Liao YT, Chen WJ, Lee WC, Shau WY, Chang YT, Tsai SY, Chen CC. Second-generation antipsychotic medications and risk of pneumonia in schizophrenia. Schizophrenia Bull. 2013;39(3):648–57.CrossRef
6.
go back to reference Knol W, Van Marum RJ, Jansen PAF, Souverein PC, Schobben AFAM, Egberts ACG. Antipsychotic drug use and risk of pneumonia in elderly people. J Am Geriatr Soc. 2008;56(4):661–6.CrossRef Knol W, Van Marum RJ, Jansen PAF, Souverein PC, Schobben AFAM, Egberts ACG. Antipsychotic drug use and risk of pneumonia in elderly people. J Am Geriatr Soc. 2008;56(4):661–6.CrossRef
7.
go back to reference Gupta S, Boville BM, Blanton R, Lukasiewicz G, Wincek J, Bai C, Forbes ML. A multicentered prospective analysis of diagnosis, risk factors, and outcomes associated with pediatric ventilator-associated pneumonia. Pediatr Crit Care Me. 2015;16(3):e65–73.CrossRef Gupta S, Boville BM, Blanton R, Lukasiewicz G, Wincek J, Bai C, Forbes ML. A multicentered prospective analysis of diagnosis, risk factors, and outcomes associated with pediatric ventilator-associated pneumonia. Pediatr Crit Care Me. 2015;16(3):e65–73.CrossRef
8.
go back to reference Manabe T, Teramoto S, Tamiya N, Okochi J, Hizawa N. Risk factors for aspiration pneumonia in older adults. PLoS One. 2015;10(10):e0140060.CrossRef Manabe T, Teramoto S, Tamiya N, Okochi J, Hizawa N. Risk factors for aspiration pneumonia in older adults. PLoS One. 2015;10(10):e0140060.CrossRef
9.
go back to reference Cooper GF, Aliferis CF, Ambrosino R, Aronis J, Buchanan BG, Caruana R, Fine MJ, Glymour C, Gordon G, Hanusa BH, et al. An evaluation of machine-learning methods for predicting pneumonia mortality. Artif Intell Med. 1997;9(2):107–38.CrossRef Cooper GF, Aliferis CF, Ambrosino R, Aronis J, Buchanan BG, Caruana R, Fine MJ, Glymour C, Gordon G, Hanusa BH, et al. An evaluation of machine-learning methods for predicting pneumonia mortality. Artif Intell Med. 1997;9(2):107–38.CrossRef
10.
go back to reference Heckerling PS, Gerber BS, Tape TG, Wigton RS. Use of genetic algorithms for neural networks to predict community-acquired pneumonia. Artif Intell Med. 2004;30(1):71–84.CrossRef Heckerling PS, Gerber BS, Tape TG, Wigton RS. Use of genetic algorithms for neural networks to predict community-acquired pneumonia. Artif Intell Med. 2004;30(1):71–84.CrossRef
11.
go back to reference Kim SY, Diggans J, Pankratz D, Huang J, Pagan M, Sindy N, Tom E, Anderson J, Choi Y, Lynch DA, et al. Classification of usual interstitial pneumonia in patients with interstitial lung disease: assessment of a machine learning approach using high-dimensional transcriptional data. Lancet Resp Med. 2015;3(6):473–82.CrossRef Kim SY, Diggans J, Pankratz D, Huang J, Pagan M, Sindy N, Tom E, Anderson J, Choi Y, Lynch DA, et al. Classification of usual interstitial pneumonia in patients with interstitial lung disease: assessment of a machine learning approach using high-dimensional transcriptional data. Lancet Resp Med. 2015;3(6):473–82.CrossRef
12.
go back to reference Hung GCL, Liu HC, Yang SY, Pan CH, Liao YT, Chen CC, Kuo CJ. Antipsychotic reexposure and recurrent pneumonia in schizophrenia: a nested case-control study. J Clin Psychiatry. 2016;77(1):60–6.CrossRef Hung GCL, Liu HC, Yang SY, Pan CH, Liao YT, Chen CC, Kuo CJ. Antipsychotic reexposure and recurrent pneumonia in schizophrenia: a nested case-control study. J Clin Psychiatry. 2016;77(1):60–6.CrossRef
13.
go back to reference Tatro DS. Drug interaction facts 2015 : the authority on drug interactions. 1st ed. St. Louis, MO: Lippincott Williams & Wilkins; 2015. Tatro DS. Drug interaction facts 2015 : the authority on drug interactions. 1st ed. St. Louis, MO: Lippincott Williams & Wilkins; 2015.
14.
go back to reference Trifirò G, Gambassi G, Sen EF, et al. Association of community-acquired pneumonia with antipsychotic drug use in elderly patients: a nested case–control study. Ann Intern Med. 2010;152(7):418–25.CrossRef Trifirò G, Gambassi G, Sen EF, et al. Association of community-acquired pneumonia with antipsychotic drug use in elderly patients: a nested case–control study. Ann Intern Med. 2010;152(7):418–25.CrossRef
15.
go back to reference Leo RJ, Kreeger JL, Kim KY, Dalmady-Israel C, Mailhot C. Cardiomyopathy associated with clozapine. Ann Pharmacother. 1996;30(6):603–5.CrossRef Leo RJ, Kreeger JL, Kim KY, Dalmady-Israel C, Mailhot C. Cardiomyopathy associated with clozapine. Ann Pharmacother. 1996;30(6):603–5.CrossRef
16.
go back to reference Dunk LR, Annan LJ, Andrews CD. Rechallenge with clozapine following leucopenia or neutropenia during previous therapy. Brit J Psychiat. 2006;188(3):255–63.CrossRef Dunk LR, Annan LJ, Andrews CD. Rechallenge with clozapine following leucopenia or neutropenia during previous therapy. Brit J Psychiat. 2006;188(3):255–63.CrossRef
17.
go back to reference Newcomer JW, Haupt DW, Fucetola R, et al. Abnormalities in glucose regulation during antipsychotic treatment of schizophrenia. Arch Gen Psychiat. 2002;59(4):337–45.CrossRef Newcomer JW, Haupt DW, Fucetola R, et al. Abnormalities in glucose regulation during antipsychotic treatment of schizophrenia. Arch Gen Psychiat. 2002;59(4):337–45.CrossRef
18.
go back to reference Chapman WW, Fizman M, Chapman BE, Haug PJ. A comparison of classification algorithms to automatically identify chest x-ray reports that support pneumonia. J Biomed Inform. 2001;34(1):4–14.CrossRef Chapman WW, Fizman M, Chapman BE, Haug PJ. A comparison of classification algorithms to automatically identify chest x-ray reports that support pneumonia. J Biomed Inform. 2001;34(1):4–14.CrossRef
19.
go back to reference Caruana R, Lou Y, Gehrke J, Koch P, Sturm M, Elhadad N. Intelligible models for healthcare: predicting pneumonia risk and hospital 30-day readmission. In: Proceedings of the 21th ACM SIGKDD international conference on knowledge discovery and data mining. Sydney, NSW, Australia: ACM; 2015. p. 1721–30.CrossRef Caruana R, Lou Y, Gehrke J, Koch P, Sturm M, Elhadad N. Intelligible models for healthcare: predicting pneumonia risk and hospital 30-day readmission. In: Proceedings of the 21th ACM SIGKDD international conference on knowledge discovery and data mining. Sydney, NSW, Australia: ACM; 2015. p. 1721–30.CrossRef
20.
go back to reference Worster A, Haines T. Advanced statistics: understanding medical record review (mrr) studies. Acad Emerg Med. 2004;11(2):187–92.CrossRef Worster A, Haines T. Advanced statistics: understanding medical record review (mrr) studies. Acad Emerg Med. 2004;11(2):187–92.CrossRef
21.
go back to reference Gearing RE, Mian IA, Barber J, Ickowicz A. A methodology for conducting retrospective chart review research in child and adolescent psychiatry. Can Acad Child Ad Psychiat. 2006;15(3):126–34. Gearing RE, Mian IA, Barber J, Ickowicz A. A methodology for conducting retrospective chart review research in child and adolescent psychiatry. Can Acad Child Ad Psychiat. 2006;15(3):126–34.
22.
23.
go back to reference Hilbert JP, Zasadil S, Keyser DJ, Peele PB. Using decision trees to manage hospital readmission risk for acute myocardial infarction, heart failure, and pneumonia. Appl Health Econ Health Policy. 2014;12(6):573–85.CrossRef Hilbert JP, Zasadil S, Keyser DJ, Peele PB. Using decision trees to manage hospital readmission risk for acute myocardial infarction, heart failure, and pneumonia. Appl Health Econ Health Policy. 2014;12(6):573–85.CrossRef
25.
go back to reference Khajehali N, Alizadeh S. Extract critical factors affecting the length of hospital stay of pneumonia patient by data mining (case study: an iranian hospital). Int J Med Inform. 2017;83:2–13. Khajehali N, Alizadeh S. Extract critical factors affecting the length of hospital stay of pneumonia patient by data mining (case study: an iranian hospital). Int J Med Inform. 2017;83:2–13.
26.
go back to reference Huang JS, Chen YF, Hsu JC. Design of a clinical decision support model for predicting pneumonia readmission. In: In: 2014 international symposium on computer, consumer and control: 10–12 June 2014 2014. Taichung, Taiwan: IEEE; 2014. p. 1179–82. Huang JS, Chen YF, Hsu JC. Design of a clinical decision support model for predicting pneumonia readmission. In: In: 2014 international symposium on computer, consumer and control: 10–12 June 2014 2014. Taichung, Taiwan: IEEE; 2014. p. 1179–82.
28.
go back to reference Chawla NV, Bowyer KW, Hall LO, Kegelmeyer WP. Smote: synthetic minority over-sampling technique. J Artif Intell Res. 2002;16:321–57.CrossRef Chawla NV, Bowyer KW, Hall LO, Kegelmeyer WP. Smote: synthetic minority over-sampling technique. J Artif Intell Res. 2002;16:321–57.CrossRef
29.
go back to reference Kuhn M, Johnson K. Applied predictive modeling. 1st ed. New York: Springer; 2013.CrossRef Kuhn M, Johnson K. Applied predictive modeling. 1st ed. New York: Springer; 2013.CrossRef
30.
go back to reference Provost F, Fawcett T. Data science for business: What you need to know about data mining and data-analytic thinking. 2nd ed. Sebastopol, CA: O'Reilly Media, Inc; 2013. Provost F, Fawcett T. Data science for business: What you need to know about data mining and data-analytic thinking. 2nd ed. Sebastopol, CA: O'Reilly Media, Inc; 2013.
32.
go back to reference Lantz B. Machine learning with r. 2nd ed. Birmingham, UK: Packt Publishing Ltd; 2015. Lantz B. Machine learning with r. 2nd ed. Birmingham, UK: Packt Publishing Ltd; 2015.
33.
go back to reference Hosmer DW Jr, Lemeshow S, Sturdivant RX. Applied logistic regression. 3rd ed. Hoboken, New Jersey: John Wiley & Sons; 2013.CrossRef Hosmer DW Jr, Lemeshow S, Sturdivant RX. Applied logistic regression. 3rd ed. Hoboken, New Jersey: John Wiley & Sons; 2013.CrossRef
34.
go back to reference Landis JR, Koch GG. The measurement of observer agreement for categorical data. Biometrics. 1977;33(1):159–74.CrossRef Landis JR, Koch GG. The measurement of observer agreement for categorical data. Biometrics. 1977;33(1):159–74.CrossRef
35.
go back to reference Citrome L, McEvoy JP, Saklad SR. Guide to the management of clozapine-related tolerability and safety concerns. Clin Schizophr Relat Psychoses. 2016;10(3):163–77.CrossRef Citrome L, McEvoy JP, Saklad SR. Guide to the management of clozapine-related tolerability and safety concerns. Clin Schizophr Relat Psychoses. 2016;10(3):163–77.CrossRef
36.
go back to reference Jeon SW, Kim YK. Unresolved issues for utilization of atypical antipsychotics in schizophrenia: antipsychotic polypharmacy and metabolic syndrome. Int J Mol Sci. 2017;18(10):2174.CrossRef Jeon SW, Kim YK. Unresolved issues for utilization of atypical antipsychotics in schizophrenia: antipsychotic polypharmacy and metabolic syndrome. Int J Mol Sci. 2017;18(10):2174.CrossRef
37.
go back to reference Caruana R, Karampatziakis N, Yessenalina A. An empirical evaluation of supervised learning in high dimensions. In: Proceedings of the 25th international conference on machine learning. Helsinki, Finland: ACM; 2008. p. 96–103. Caruana R, Karampatziakis N, Yessenalina A. An empirical evaluation of supervised learning in high dimensions. In: Proceedings of the 25th international conference on machine learning. Helsinki, Finland: ACM; 2008. p. 96–103.
Metadata
Title
Predicting hospital-acquired pneumonia among schizophrenic patients: a machine learning approach
Authors
Kuang Ming Kuo
Paul C. Talley
Chi Hsien Huang
Liang Chih Cheng
Publication date
01-12-2019
Publisher
BioMed Central
Published in
BMC Medical Informatics and Decision Making / Issue 1/2019
Electronic ISSN: 1472-6947
DOI
https://doi.org/10.1186/s12911-019-0792-1

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