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Published in: BMC Nephrology 1/2015

Open Access 01-12-2015 | Review

Transplant biopsy beyond light microscopy

Authors: Benjamin Adam, Michael Mengel

Published in: BMC Nephrology | Issue 1/2015

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Abstract

Despite its long-standing status as the diagnostic “gold standard”, the renal transplant biopsy is limited by a fundamental dependence on descriptive, empirically-derived consensus classification. The recent shift towards personalized medicine has resulted in an increased demand for precise, mechanism-based diagnoses, which is not fully met by the contemporary transplantation pathology standard of care. The expectation is that molecular techniques will provide novel pathogenetic insights that will allow for the identification of more accurate diagnostic, prognostic, and therapeutic targets. Here we review the current state of molecular renal transplantation pathology. Despite significant research activity and progress within the field, routine adoption of clinical molecular testing has not yet been achieved. The recent development of novel molecular platforms suitable for use with formalin-fixed paraffin-embedded tissue will offer potential solution for the major barriers to implementation. The recent incorporation of molecular diagnostic criteria into the 2013 Banff classification is a reflection of progress made and future directions in the area of molecular transplantation pathology. Transcripts related to endothelial injury and NK cell activation have consistently been shown to be associated with antibody-mediated rejection. Prospective multicenter validation and implementation of molecular diagnostics for major entities remains an unmet clinical need in transplantation. It is expected that an integrated system of transplantation pathology diagnosis comprising molecular, morphological, serological, and clinical variables will ultimately provide the greatest diagnostic precision.
Literature
1.
go back to reference Broecker V, Mengel M. The significance of histological diagnosis in renal allograft biopsies in 2014. Transpl Int. 2015;28(2):136–45.PubMedCrossRef Broecker V, Mengel M. The significance of histological diagnosis in renal allograft biopsies in 2014. Transpl Int. 2015;28(2):136–45.PubMedCrossRef
2.
go back to reference Mengel M, Sis B, Halloran PF. SWOT analysis of Banff: strengths, weaknesses, opportunities and threats of the international Banff consensus process and classification system for renal allograft pathology. Am J Transplant. 2007;7(10):2221–6.PubMedCrossRef Mengel M, Sis B, Halloran PF. SWOT analysis of Banff: strengths, weaknesses, opportunities and threats of the international Banff consensus process and classification system for renal allograft pathology. Am J Transplant. 2007;7(10):2221–6.PubMedCrossRef
3.
go back to reference Mirnezami R, Nicholson J, Darzi A. Preparing for precision medicine. N Engl J Med. 2012;366(6):489–91.PubMedCrossRef Mirnezami R, Nicholson J, Darzi A. Preparing for precision medicine. N Engl J Med. 2012;366(6):489–91.PubMedCrossRef
4.
go back to reference Mengel M, Campbell P, Gebel H, Randhawa P, Rodriguez ER, Colvin R, et al. Precision diagnostics in transplantation: from bench to bedside. Am J Transplant. 2013;13(3):562–8.PubMedCrossRef Mengel M, Campbell P, Gebel H, Randhawa P, Rodriguez ER, Colvin R, et al. Precision diagnostics in transplantation: from bench to bedside. Am J Transplant. 2013;13(3):562–8.PubMedCrossRef
5.
go back to reference Halloran PF, Einecke G. Microarrays and transcriptome analysis in renal transplantation. Nat Clin Pract Nephrol. 2006;2(1):2–3.PubMedCrossRef Halloran PF, Einecke G. Microarrays and transcriptome analysis in renal transplantation. Nat Clin Pract Nephrol. 2006;2(1):2–3.PubMedCrossRef
6.
go back to reference Akalin E, Hendrix RC, Polavarapu RG, Pearson TC, Neylan JF, Larsen CP, et al. Gene expression analysis in human renal allograft biopsy samples using high-density oligoarray technology. Transplantation. 2001;72(5):948–53.PubMedCrossRef Akalin E, Hendrix RC, Polavarapu RG, Pearson TC, Neylan JF, Larsen CP, et al. Gene expression analysis in human renal allograft biopsy samples using high-density oligoarray technology. Transplantation. 2001;72(5):948–53.PubMedCrossRef
7.
go back to reference Stegall M, Park W, Kim D, Kremers W. Gene expression during acute allograft rejection: novel statistical analysis of microarray data. Am J Transplant. 2002;2(10):913–25.PubMedCrossRef Stegall M, Park W, Kim D, Kremers W. Gene expression during acute allograft rejection: novel statistical analysis of microarray data. Am J Transplant. 2002;2(10):913–25.PubMedCrossRef
8.
go back to reference Scherer A, Krause A, Walker JR, Korn A, Niese D, Raulf F. Early prognosis of the development of renal chronic allograft rejection by gene expression profiling of human protocol biopsies. Transplantation. 2003;75(8):1323–30.PubMedCrossRef Scherer A, Krause A, Walker JR, Korn A, Niese D, Raulf F. Early prognosis of the development of renal chronic allograft rejection by gene expression profiling of human protocol biopsies. Transplantation. 2003;75(8):1323–30.PubMedCrossRef
9.
go back to reference Sarwal M, Chua MS, Kambham N, Hsieh SC, Satterwhite T, Masek M, et al. Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling. N Engl J Med. 2003;349(2):125–38.PubMedCrossRef Sarwal M, Chua MS, Kambham N, Hsieh SC, Satterwhite T, Masek M, et al. Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling. N Engl J Med. 2003;349(2):125–38.PubMedCrossRef
10.
go back to reference Hoffmann SC, Hale DA, Kleiner DE, Mannon RB, Kampen RL, Jacobson LM, et al. Functionally significant renal allograft rejection is defined by transcriptional criteria. Am J Transplant. 2005;5(3):573–81.PubMedCrossRef Hoffmann SC, Hale DA, Kleiner DE, Mannon RB, Kampen RL, Jacobson LM, et al. Functionally significant renal allograft rejection is defined by transcriptional criteria. Am J Transplant. 2005;5(3):573–81.PubMedCrossRef
11.
go back to reference Halloran PF, de Freitas DG, Einecke G, Famulski KS, Hidalgo LG, Menge LM, et al. An integrated view of molecular changes, histopathology and outcomes in kidney transplants. Am J Transplant. 2010;10(10):2223–30.PubMedCrossRef Halloran PF, de Freitas DG, Einecke G, Famulski KS, Hidalgo LG, Menge LM, et al. An integrated view of molecular changes, histopathology and outcomes in kidney transplants. Am J Transplant. 2010;10(10):2223–30.PubMedCrossRef
12.
go back to reference Muthukumar T, Dadhania D, Ding R, Snopkowski C, Naqvi R, Lee JB, et al. Messenger RNA for FOXP3 in the urine of renal-allograft recipients. N Engl J Med. 2005;353(22):2342–51.PubMedCrossRef Muthukumar T, Dadhania D, Ding R, Snopkowski C, Naqvi R, Lee JB, et al. Messenger RNA for FOXP3 in the urine of renal-allograft recipients. N Engl J Med. 2005;353(22):2342–51.PubMedCrossRef
13.
go back to reference Suthanthiran M, Schwartz JE, Ding R, Abecassis M, Dadhania D, Samstein B, et al. Urinary-cell mRNA profile and acute cellular rejection in kidney allografts. N Engl J Med. 2013;369(1):20–31.PubMedPubMedCentralCrossRef Suthanthiran M, Schwartz JE, Ding R, Abecassis M, Dadhania D, Samstein B, et al. Urinary-cell mRNA profile and acute cellular rejection in kidney allografts. N Engl J Med. 2013;369(1):20–31.PubMedPubMedCentralCrossRef
14.
go back to reference Keslar KS, Lin M, Zmijewska AA, Sigdel TK, Tran TQ, Ma L, et al. Multicenter evaluation of a standardized protocol for noninvasive gene expression profiling. Am J Transplant. 2013;13(7):1891–7.PubMedPubMedCentralCrossRef Keslar KS, Lin M, Zmijewska AA, Sigdel TK, Tran TQ, Ma L, et al. Multicenter evaluation of a standardized protocol for noninvasive gene expression profiling. Am J Transplant. 2013;13(7):1891–7.PubMedPubMedCentralCrossRef
15.
go back to reference Halloran PF, de Freitas DG, Einecke G, Famulski KS, Hidalgo LG, Mengel M, et al. The molecular phenotype of kidney transplants. Am J Transplant. 2010;10(10):2215–22.PubMedCrossRef Halloran PF, de Freitas DG, Einecke G, Famulski KS, Hidalgo LG, Mengel M, et al. The molecular phenotype of kidney transplants. Am J Transplant. 2010;10(10):2215–22.PubMedCrossRef
16.
go back to reference Khatri P, Roedder S, Kimura N, De Vusser K, Morgan AA, Gong Y, et al. A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantation. J Exp Med. 2013;210(11):2205–21.PubMedPubMedCentralCrossRef Khatri P, Roedder S, Kimura N, De Vusser K, Morgan AA, Gong Y, et al. A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantation. J Exp Med. 2013;210(11):2205–21.PubMedPubMedCentralCrossRef
17.
go back to reference Mengel M, Bock O, Priess M, Haller H, Kreipe H, Gwinner W. Expression of pro- and antifibrotic genes in protocol biopsies from renal allografts with interstitial fibrosis and tubular atrophy. Clin Nephrol. 2008;69(6):408–16.PubMedCrossRef Mengel M, Bock O, Priess M, Haller H, Kreipe H, Gwinner W. Expression of pro- and antifibrotic genes in protocol biopsies from renal allografts with interstitial fibrosis and tubular atrophy. Clin Nephrol. 2008;69(6):408–16.PubMedCrossRef
18.
go back to reference Allanach K, Mengel M, Einecke G, Sis B, Hidalgo LG, Mueller T, et al. Comparing microarray versus RT-PCR assessment of renal allograft biopsies: similar performance despite different dynamic ranges. Am J Transplant. 2008;8(5):1006–15.PubMedCrossRef Allanach K, Mengel M, Einecke G, Sis B, Hidalgo LG, Mueller T, et al. Comparing microarray versus RT-PCR assessment of renal allograft biopsies: similar performance despite different dynamic ranges. Am J Transplant. 2008;8(5):1006–15.PubMedCrossRef
19.
go back to reference Geiss GK, Bumgarner RE, Birditt B, Dahl T, Dowidar N, Dunaway DL, et al. Direct multiplexed measurement of gene expression with color-coded probe pairs. Nat Biotechnol. 2008;26(3):317–25.PubMedCrossRef Geiss GK, Bumgarner RE, Birditt B, Dahl T, Dowidar N, Dunaway DL, et al. Direct multiplexed measurement of gene expression with color-coded probe pairs. Nat Biotechnol. 2008;26(3):317–25.PubMedCrossRef
20.
go back to reference Reis PP, Waldron L, Goswami RS, Xu W, Xuan Y, Perez-Ordonez B, et al. mRNA transcript quantification in archival samples using multiplexed, color-coded probes. BMC Biotechnol. 2011;11:46.PubMedPubMedCentralCrossRef Reis PP, Waldron L, Goswami RS, Xu W, Xuan Y, Perez-Ordonez B, et al. mRNA transcript quantification in archival samples using multiplexed, color-coded probes. BMC Biotechnol. 2011;11:46.PubMedPubMedCentralCrossRef
21.
go back to reference Mueller TF, Reeve J, Jhangri GS, Mengel M, Jacaj Z, Cairo L, et al. The transcriptome of the implant biopsy identifies donor kidneys at increased risk of delayed graft function. Am J Transplant. 2008;8(1):78–85.PubMed Mueller TF, Reeve J, Jhangri GS, Mengel M, Jacaj Z, Cairo L, et al. The transcriptome of the implant biopsy identifies donor kidneys at increased risk of delayed graft function. Am J Transplant. 2008;8(1):78–85.PubMed
22.
go back to reference Hauser P, Schwarz C, Mitterbauer C, Regele HM, Muhlbacher F, Mayer G, et al. Genome-wide gene-expression patterns of donor kidney biopsies distinguish primary allograft function. Lab Invest. 2004;84(3):353–61.PubMedCrossRef Hauser P, Schwarz C, Mitterbauer C, Regele HM, Muhlbacher F, Mayer G, et al. Genome-wide gene-expression patterns of donor kidney biopsies distinguish primary allograft function. Lab Invest. 2004;84(3):353–61.PubMedCrossRef
23.
go back to reference Einecke G, Broderick G, Sis B, Halloran PF. Early loss of renal transcripts in kidney allografts: relationship to the development of histologic lesions and alloimmune effector mechanisms. Am J Transplant. 2007;7(5):1121–30.PubMedCrossRef Einecke G, Broderick G, Sis B, Halloran PF. Early loss of renal transcripts in kidney allografts: relationship to the development of histologic lesions and alloimmune effector mechanisms. Am J Transplant. 2007;7(5):1121–30.PubMedCrossRef
24.
go back to reference Famulski KS, de Freitas DG, Kreepala C, Chang J, Sellares J, Sis B, et al. Molecular phenotypes of acute kidney injury in kidney transplants. J Am Soc Nephrol. 2012;23(5):948–58.PubMedPubMedCentralCrossRef Famulski KS, de Freitas DG, Kreepala C, Chang J, Sellares J, Sis B, et al. Molecular phenotypes of acute kidney injury in kidney transplants. J Am Soc Nephrol. 2012;23(5):948–58.PubMedPubMedCentralCrossRef
25.
go back to reference Kainz A, Perco P, Mayer B, Soleiman A, Steininger R, Mayer G, et al. Gene-expression profiles and age of donor kidney biopsies obtained before transplantation distinguish medium term graft function. Transplantation. 2007;83(8):1048–54.PubMedCrossRef Kainz A, Perco P, Mayer B, Soleiman A, Steininger R, Mayer G, et al. Gene-expression profiles and age of donor kidney biopsies obtained before transplantation distinguish medium term graft function. Transplantation. 2007;83(8):1048–54.PubMedCrossRef
26.
go back to reference Korbely R, Wilflingseder J, Perco P, Kainz A, Langer RM, Mayer B, et al. Molecular biomarker candidates of acute kidney injury in zero-hour renal transplant needle biopsies. Transpl Int. 2011;24(2):143–9.PubMedCrossRef Korbely R, Wilflingseder J, Perco P, Kainz A, Langer RM, Mayer B, et al. Molecular biomarker candidates of acute kidney injury in zero-hour renal transplant needle biopsies. Transpl Int. 2011;24(2):143–9.PubMedCrossRef
27.
go back to reference Kreepala C, Famulski KS, Chang J, Halloran PF. Comparing molecular assessment of implantation biopsies with histologic and demographic risk assessment. Am J Transplant. 2013;13(2):415–26.PubMedCrossRef Kreepala C, Famulski KS, Chang J, Halloran PF. Comparing molecular assessment of implantation biopsies with histologic and demographic risk assessment. Am J Transplant. 2013;13(2):415–26.PubMedCrossRef
28.
go back to reference Einecke G, Melk A, Ramassar V, Zhu LF, Bleackley RC, Famulski KS, et al. Expression of CTL associated transcripts precedes the development of tubulitis in T-cell mediated kidney graft rejection. Am J Transplant. 2005;5(8):1827–36.PubMedCrossRef Einecke G, Melk A, Ramassar V, Zhu LF, Bleackley RC, Famulski KS, et al. Expression of CTL associated transcripts precedes the development of tubulitis in T-cell mediated kidney graft rejection. Am J Transplant. 2005;5(8):1827–36.PubMedCrossRef
29.
go back to reference Einecke G, Fairhead T, Hidalgo LG, Sis B, Turner P, Zhu LF, et al. Tubulitis and epithelial cell alterations in mouse kidney transplant rejection are independent of CD103, perforin or granzymes A/B. Am J Transplant. 2006;6(9):2109–20. Einecke G, Fairhead T, Hidalgo LG, Sis B, Turner P, Zhu LF, et al. Tubulitis and epithelial cell alterations in mouse kidney transplant rejection are independent of CD103, perforin or granzymes A/B. Am J Transplant. 2006;6(9):2109–20.
30.
go back to reference Hidalgo LG, Einecke G, Allanach K, Halloran PF. The transcriptome of human cytotoxic T cells: similarities and disparities among allostimulated CD4(+) CTL, CD8(+) CTL and NK cells. Am J Transplant. 2008;8(3):627–36.PubMedCrossRef Hidalgo LG, Einecke G, Allanach K, Halloran PF. The transcriptome of human cytotoxic T cells: similarities and disparities among allostimulated CD4(+) CTL, CD8(+) CTL and NK cells. Am J Transplant. 2008;8(3):627–36.PubMedCrossRef
31.
go back to reference Hidalgo LG, Einecke G, Allanach K, Mengel M, Sis B, Mueller TF, et al. The transcriptome of human cytotoxic T cells: measuring the burden of CTL-associated transcripts in human kidney transplants. Am J Transplant. 2008;8(3):637–46.PubMedCrossRef Hidalgo LG, Einecke G, Allanach K, Mengel M, Sis B, Mueller TF, et al. The transcriptome of human cytotoxic T cells: measuring the burden of CTL-associated transcripts in human kidney transplants. Am J Transplant. 2008;8(3):637–46.PubMedCrossRef
32.
go back to reference Famulski KS, Einecke G, Sis B, Mengel M, Hidalgo LG, Kaplan B, et al. Defining the canonical form of T-cell-mediated rejection in human kidney transplants. Am J Transplant. 2010;10(4):810–20.PubMedCrossRef Famulski KS, Einecke G, Sis B, Mengel M, Hidalgo LG, Kaplan B, et al. Defining the canonical form of T-cell-mediated rejection in human kidney transplants. Am J Transplant. 2010;10(4):810–20.PubMedCrossRef
33.
go back to reference Famulski KS, Kayser D, Einecke G, Allanach K, Badr D, Venner J, et al. Alternative macrophage activation-associated transcripts in T-cell-mediated rejection of mouse kidney allografts. Am J Transplant. 2010;10(3):490–7.PubMedCrossRef Famulski KS, Kayser D, Einecke G, Allanach K, Badr D, Venner J, et al. Alternative macrophage activation-associated transcripts in T-cell-mediated rejection of mouse kidney allografts. Am J Transplant. 2010;10(3):490–7.PubMedCrossRef
34.
go back to reference Famulski K, Einecke G, Halloran PF. IFN-g inducible transcripts are increased in T cell mediated rejectioin (TCMR), but some are also increased in tissue injury. Am J Transplant. 2005;5(s11):448–9. Famulski K, Einecke G, Halloran PF. IFN-g inducible transcripts are increased in T cell mediated rejectioin (TCMR), but some are also increased in tissue injury. Am J Transplant. 2005;5(s11):448–9.
35.
go back to reference Famulski KS, Einecke G, Reeve J, Ramassar V, Allanach K, Mueller T, et al. Changes in the transcriptome in allograft rejection: IFN-gamma-induced transcripts in mouse kidney allografts. Am J Transplant. 2006;6(6):1342–54.PubMedCrossRef Famulski KS, Einecke G, Reeve J, Ramassar V, Allanach K, Mueller T, et al. Changes in the transcriptome in allograft rejection: IFN-gamma-induced transcripts in mouse kidney allografts. Am J Transplant. 2006;6(6):1342–54.PubMedCrossRef
36.
go back to reference Strehlau J, Pavlakis M, Lipman M, Shapiro M, Vasconcellos L, Harmon W, et al. Quantitative detection of immune activation transcripts as a diagnostic tool in kidney transplantation. Proc Nat Acad Sci. 1997;94:695–700.PubMedPubMedCentralCrossRef Strehlau J, Pavlakis M, Lipman M, Shapiro M, Vasconcellos L, Harmon W, et al. Quantitative detection of immune activation transcripts as a diagnostic tool in kidney transplantation. Proc Nat Acad Sci. 1997;94:695–700.PubMedPubMedCentralCrossRef
37.
go back to reference Sharma VK, Bologa RM, Li B, Xu GP, Lagman M, Hiscock W, et al. Molecular executors of cell death--differential intrarenal expression of Fas ligand, Fas, granzyme B, and perforin during acute and/or chronic rejection of human renal allografts. Transplantation. 1996;62(12):1860–6.PubMedCrossRef Sharma VK, Bologa RM, Li B, Xu GP, Lagman M, Hiscock W, et al. Molecular executors of cell death--differential intrarenal expression of Fas ligand, Fas, granzyme B, and perforin during acute and/or chronic rejection of human renal allografts. Transplantation. 1996;62(12):1860–6.PubMedCrossRef
38.
go back to reference Lipman ML, Stevens AC, Strom TB. Heightened intragraft CTL gene expression in acutely rejecting renal allografts. J Immunol. 1994;152(10):5120–7.PubMed Lipman ML, Stevens AC, Strom TB. Heightened intragraft CTL gene expression in acutely rejecting renal allografts. J Immunol. 1994;152(10):5120–7.PubMed
39.
go back to reference Strehlau J, Pavlakis M, Lipman M, Maslinski W, Shapiro M, Strom TB. The intragraft gene activation of markers reflecting T-cell-activation and -cytotoxicity analyzed by quantitative RT-PCR in renal transplantation. Clin Nephrol. 1996;46(1):30–3.PubMed Strehlau J, Pavlakis M, Lipman M, Maslinski W, Shapiro M, Strom TB. The intragraft gene activation of markers reflecting T-cell-activation and -cytotoxicity analyzed by quantitative RT-PCR in renal transplantation. Clin Nephrol. 1996;46(1):30–3.PubMed
40.
go back to reference Suthanthiran M. Molecular analyses of human renal allografts: differential intragraft gene expression during rejection. Kidney Int Suppl. 1997;58:S15–21.PubMed Suthanthiran M. Molecular analyses of human renal allografts: differential intragraft gene expression during rejection. Kidney Int Suppl. 1997;58:S15–21.PubMed
41.
go back to reference Desvaux D, Schwarzinger M, Pastural M, Baron C, Abtahi M, Berrehar F, et al. Molecular diagnosis of renal-allograft rejection: correlation with histopathologic evaluation and antirejection-therapy resistance. Transplantation. 2004;78(5):647–53.PubMedCrossRef Desvaux D, Schwarzinger M, Pastural M, Baron C, Abtahi M, Berrehar F, et al. Molecular diagnosis of renal-allograft rejection: correlation with histopathologic evaluation and antirejection-therapy resistance. Transplantation. 2004;78(5):647–53.PubMedCrossRef
42.
go back to reference Reeve J, Einecke G, Mengel M, Sis B, Kayser N, Kaplan B, et al. Diagnosing rejection in renal transplants: a comparison of molecular- and histopathology-based approaches. Am J Transplant. 2009;9(8):1802–10.PubMedCrossRef Reeve J, Einecke G, Mengel M, Sis B, Kayser N, Kaplan B, et al. Diagnosing rejection in renal transplants: a comparison of molecular- and histopathology-based approaches. Am J Transplant. 2009;9(8):1802–10.PubMedCrossRef
43.
go back to reference Mueller TF, Einecke G, Reeve J, Sis B, Mengel M, Jhangri GS, et al. Microarray analysis of rejection in human kidney transplants using pathogenesis-based transcript sets. Am J Transplant. 2007;7(12):2712–22.PubMedCrossRef Mueller TF, Einecke G, Reeve J, Sis B, Mengel M, Jhangri GS, et al. Microarray analysis of rejection in human kidney transplants using pathogenesis-based transcript sets. Am J Transplant. 2007;7(12):2712–22.PubMedCrossRef
44.
go back to reference Flechner SM, Kurian SM, Head SR, Sharp SM, Whisenant TC, Zhang J, et al. Kidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytes. Am J Transplant. 2004;4(9):1475–89.PubMedPubMedCentralCrossRef Flechner SM, Kurian SM, Head SR, Sharp SM, Whisenant TC, Zhang J, et al. Kidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytes. Am J Transplant. 2004;4(9):1475–89.PubMedPubMedCentralCrossRef
45.
go back to reference Spivey TL, Uccellini L, Ascierto ML, Zoppoli G, De Giorgi V, Delogu LG, et al. Gene expression profiling in acute allograft rejection: challenging the immunologic constant of rejection hypothesis. J Transl Med. 2011;9:174.PubMedPubMedCentralCrossRef Spivey TL, Uccellini L, Ascierto ML, Zoppoli G, De Giorgi V, Delogu LG, et al. Gene expression profiling in acute allograft rejection: challenging the immunologic constant of rejection hypothesis. J Transl Med. 2011;9:174.PubMedPubMedCentralCrossRef
46.
go back to reference Reeve J, Sellares J, Mengel M, Sis B, Skene A, Hidalgo L, et al. Molecular diagnosis of T cell-mediated rejection in human kidney transplant biopsies. Am J Transplant. 2013;13(3):645–55.PubMedCrossRef Reeve J, Sellares J, Mengel M, Sis B, Skene A, Hidalgo L, et al. Molecular diagnosis of T cell-mediated rejection in human kidney transplant biopsies. Am J Transplant. 2013;13(3):645–55.PubMedCrossRef
47.
go back to reference Haas M, Sis B, Racusen LC, Solez K, Glotz D, Colvin RB, et al. Banff 2013 meeting report: inclusion of c4d-negative antibody-mediated rejection and antibody-associated arterial lesions. Am J Transplant. 2014;14(2):272–83.PubMedCrossRef Haas M, Sis B, Racusen LC, Solez K, Glotz D, Colvin RB, et al. Banff 2013 meeting report: inclusion of c4d-negative antibody-mediated rejection and antibody-associated arterial lesions. Am J Transplant. 2014;14(2):272–83.PubMedCrossRef
48.
go back to reference Colvin RB. Antibody-mediated renal allograft rejection: diagnosis and pathogenesis. J Am Soc Nephrol. 2007;18(4):1046–56.PubMedCrossRef Colvin RB. Antibody-mediated renal allograft rejection: diagnosis and pathogenesis. J Am Soc Nephrol. 2007;18(4):1046–56.PubMedCrossRef
49.
go back to reference Akiyoshi T, Hirohashi T, Alessandrini A, Chase CM, Neal Smith R, Madsen JC, et al. Role of complement and NK cells in antibody mediated rejection. Hum Immunol. 2012;73(12):1226–32.PubMedPubMedCentralCrossRef Akiyoshi T, Hirohashi T, Alessandrini A, Chase CM, Neal Smith R, Madsen JC, et al. Role of complement and NK cells in antibody mediated rejection. Hum Immunol. 2012;73(12):1226–32.PubMedPubMedCentralCrossRef
50.
go back to reference Sis B, Jhangri GS, Bunnag S, Allanach K, Kaplan B, Halloran PF. Endothelial gene expression in kidney transplants with alloantibody indicates antibody-mediated damage despite lack of C4d staining. Am J Transplant. 2009;9(10):2312–23.PubMedCrossRef Sis B, Jhangri GS, Bunnag S, Allanach K, Kaplan B, Halloran PF. Endothelial gene expression in kidney transplants with alloantibody indicates antibody-mediated damage despite lack of C4d staining. Am J Transplant. 2009;9(10):2312–23.PubMedCrossRef
51.
go back to reference Hidalgo LG, Sellares J, Sis B, Mengel M, Chang J, Halloran PF. Interpreting NK cell transcripts versus T cell transcripts in renal transplant biopsies. Am J Transplant. 2012;12(5):1180–91.PubMedCrossRef Hidalgo LG, Sellares J, Sis B, Mengel M, Chang J, Halloran PF. Interpreting NK cell transcripts versus T cell transcripts in renal transplant biopsies. Am J Transplant. 2012;12(5):1180–91.PubMedCrossRef
52.
go back to reference Hidalgo LG, Sis B, Sellares J, Campbell PM, Mengel M, Einecke G, et al. NK cell transcripts and NK cells in kidney biopsies from patients with donor-specific antibodies: evidence for NK cell involvement in antibody-mediated rejection. Am J Transplant. 2010;10(8):1812–22.PubMedCrossRef Hidalgo LG, Sis B, Sellares J, Campbell PM, Mengel M, Einecke G, et al. NK cell transcripts and NK cells in kidney biopsies from patients with donor-specific antibodies: evidence for NK cell involvement in antibody-mediated rejection. Am J Transplant. 2010;10(8):1812–22.PubMedCrossRef
53.
go back to reference Dean PG, Park WD, Cornell LD, Gloor JM, Stegall MD. Intragraft gene expression in positive crossmatch kidney allografts: ongoing inflammation mediates chronic antibody-mediated injury. Am J Transplant. 2012;12(6):1551–63.PubMedCrossRef Dean PG, Park WD, Cornell LD, Gloor JM, Stegall MD. Intragraft gene expression in positive crossmatch kidney allografts: ongoing inflammation mediates chronic antibody-mediated injury. Am J Transplant. 2012;12(6):1551–63.PubMedCrossRef
54.
go back to reference Kamal L, Broin PO, Bao Y, Ajaimy M, Lubetzky M, Gupta A, et al. Clinical, Histological, and Molecular Markers Associated With Allograft Loss in Transplant Glomerulopathy Patients. Transplantation. 2015. [Epub ahead of print]. Kamal L, Broin PO, Bao Y, Ajaimy M, Lubetzky M, Gupta A, et al. Clinical, Histological, and Molecular Markers Associated With Allograft Loss in Transplant Glomerulopathy Patients. Transplantation. 2015. [Epub ahead of print].
55.
go back to reference Hayde N, Bao Y, Pullman J, Ye B, Calder RB, Chung M, et al. The clinical and genomic significance of donor-specific antibody-positive/C4d-negative and donor-specific antibody-negative/C4d-negative transplant glomerulopathy. Clin J Am Soc Nephrol. 2013;8(12):2141–8.PubMedPubMedCentralCrossRef Hayde N, Bao Y, Pullman J, Ye B, Calder RB, Chung M, et al. The clinical and genomic significance of donor-specific antibody-positive/C4d-negative and donor-specific antibody-negative/C4d-negative transplant glomerulopathy. Clin J Am Soc Nephrol. 2013;8(12):2141–8.PubMedPubMedCentralCrossRef
56.
go back to reference Hayde N, Broin PO, Bao Y, de Boccardo G, Lubetzky M, Ajaimy M, et al. Increased intragraft rejection-associated gene transcripts in patients with donor-specific antibodies and normal biopsies. Kidney Int. 2014;86(3):600–9.PubMedCrossRef Hayde N, Broin PO, Bao Y, de Boccardo G, Lubetzky M, Ajaimy M, et al. Increased intragraft rejection-associated gene transcripts in patients with donor-specific antibodies and normal biopsies. Kidney Int. 2014;86(3):600–9.PubMedCrossRef
57.
go back to reference Sellares J, Reeve J, Loupy A, Mengel M, Sis B, Skene A, et al. Molecular Diagnosis of Antibody-Mediated Rejection in Human Kidney Transplants. Am J Transplant. 2013;13(4):971–83.PubMedCrossRef Sellares J, Reeve J, Loupy A, Mengel M, Sis B, Skene A, et al. Molecular Diagnosis of Antibody-Mediated Rejection in Human Kidney Transplants. Am J Transplant. 2013;13(4):971–83.PubMedCrossRef
58.
go back to reference Einecke G, Reeve J, Sis B, Mengel M, Hidalgo L, Famulski KS, et al. A molecular classifier for predicting future graft loss in late kidney transplant biopsies. J Clin Invest. 2010;120(6):1862–72.PubMedPubMedCentralCrossRef Einecke G, Reeve J, Sis B, Mengel M, Hidalgo L, Famulski KS, et al. A molecular classifier for predicting future graft loss in late kidney transplant biopsies. J Clin Invest. 2010;120(6):1862–72.PubMedPubMedCentralCrossRef
59.
go back to reference Famulski KS, Reeve J, de Freitas DG, Kreepala C, Chang J, Halloran PF. Kidney transplants with progressing chronic diseases express high levels of acute kidney injury transcripts. Am J Transplant. 2013;13(3):634–44.PubMedCrossRef Famulski KS, Reeve J, de Freitas DG, Kreepala C, Chang J, Halloran PF. Kidney transplants with progressing chronic diseases express high levels of acute kidney injury transcripts. Am J Transplant. 2013;13(3):634–44.PubMedCrossRef
Metadata
Title
Transplant biopsy beyond light microscopy
Authors
Benjamin Adam
Michael Mengel
Publication date
01-12-2015
Publisher
BioMed Central
Published in
BMC Nephrology / Issue 1/2015
Electronic ISSN: 1471-2369
DOI
https://doi.org/10.1186/s12882-015-0136-z

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