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Published in: Journal of Translational Medicine 1/2011

Open Access 01-12-2011 | Review

Gene expression profiling in acute allograft rejection: challenging the immunologic constant of rejection hypothesis

Authors: Tara L Spivey, Lorenzo Uccellini, Maria Libera Ascierto, Gabriele Zoppoli, Valeria De Giorgi, Lucia Gemma Delogu, Alyson M Engle, Jaime M Thomas, Ena Wang, Francesco M Marincola, Davide Bedognetti

Published in: Journal of Translational Medicine | Issue 1/2011

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Abstract

In humans, the role and relationship between molecular pathways that lead to tissue destruction during acute allograft rejection are not fully understood. Based on studies conducted in humans, we recently hypothesized that different immune-mediated tissue destruction processes (i.e. cancer, infection, autoimmunity) share common convergent final mechanisms. We called this phenomenon the "Immunologic Constant of Rejection (ICR)." The elements of the ICR include molecular pathways that are consistently described through different immune-mediated tissue destruction processes and demonstrate the activation of interferon-stimulated genes (ISGs), the recruitment of cytotoxic immune cells (primarily through CXCR3/CCR5 ligand pathways), and the activation of immune effector function genes (IEF genes; granzymes A/B, perforin, etc.).
Here, we challenge the ICR hypothesis by using a meta-analytical approach and systematically reviewing microarray studies evaluating gene expression on tissue biopsies during acute allograft rejection. We found the pillars of the ICR consistently present among the studies reviewed, despite implicit heterogeneity.
Additionally, we provide a descriptive mechanistic overview of acute allograft rejection by describing those molecular pathways most frequently encountered and thereby thought to be most significant. The biological role of the following molecular pathways is described: IFN-γ, CXCR3/CCR5 ligand, IEF genes, TNF-α, IL-10, IRF-1/STAT-1, and complement pathways. The role of NK cell, B cell and T-regulatory cell signatures are also addressed.
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Literature
1.
go back to reference Panelli MC, Stashower ME, Slade HB, Smith K, Norwood C, Abati A, Fetsch P, Filie A, Walters SA, Astry C: Sequential gene profiling of basal cell carcinomas treated with imiquimod in a placebo-controlled study defines the requirements for tissue rejection. Genome Biology. 2007, 8: Panelli MC, Stashower ME, Slade HB, Smith K, Norwood C, Abati A, Fetsch P, Filie A, Walters SA, Astry C: Sequential gene profiling of basal cell carcinomas treated with imiquimod in a placebo-controlled study defines the requirements for tissue rejection. Genome Biology. 2007, 8:
2.
go back to reference Wang E, Miller LD, Ohnmacht GA, Mocellin S, Perez-Diaz A, Petersen D, Zhao YD, Simon R, Powell JI, Asaki E: Prospective molecular profiling of melanoma metastases suggests classifiers of immune responsiveness. Cancer Research. 2002, 62: 3581-3586.PubMedCentralPubMed Wang E, Miller LD, Ohnmacht GA, Mocellin S, Perez-Diaz A, Petersen D, Zhao YD, Simon R, Powell JI, Asaki E: Prospective molecular profiling of melanoma metastases suggests classifiers of immune responsiveness. Cancer Research. 2002, 62: 3581-3586.PubMedCentralPubMed
3.
go back to reference Wang E, Worschech A, Marincola FM: The immunologic constant of rejection. Trends in Immunology. 2008, 29: 256-262.PubMed Wang E, Worschech A, Marincola FM: The immunologic constant of rejection. Trends in Immunology. 2008, 29: 256-262.PubMed
4.
go back to reference Bedognetti D, Wang E, Sertoli MR, Marincola FM: Gene-expression profiling in vaccine therapy and immunotherapy for cancer. Expert Review of Vaccines. 2010, 9: 555-565.PubMedCentralPubMed Bedognetti D, Wang E, Sertoli MR, Marincola FM: Gene-expression profiling in vaccine therapy and immunotherapy for cancer. Expert Review of Vaccines. 2010, 9: 555-565.PubMedCentralPubMed
5.
go back to reference Imanguli MM, Swaim WD, League SC, Gress RE, Pavletic SZ, Hakim FT: Increased T-bet+ cytotoxic effectors and type I interferon-mediated processes in chronic graft-versus-host disease of the oral mucosa. Blood. 2009, 113: 3620-3630.PubMedCentralPubMed Imanguli MM, Swaim WD, League SC, Gress RE, Pavletic SZ, Hakim FT: Increased T-bet+ cytotoxic effectors and type I interferon-mediated processes in chronic graft-versus-host disease of the oral mucosa. Blood. 2009, 113: 3620-3630.PubMedCentralPubMed
6.
go back to reference He XS, Ji X, Hale MB, Cheung R, Ahmed A, Guo Y, Nolan GP, Pfeffer LM, Wright TL, Risch N: Global transcriptional response to interferon is a determinant of HCV treatment outcome and is modified by race. Hepatology. 2006, 44: 352-359.PubMed He XS, Ji X, Hale MB, Cheung R, Ahmed A, Guo Y, Nolan GP, Pfeffer LM, Wright TL, Risch N: Global transcriptional response to interferon is a determinant of HCV treatment outcome and is modified by race. Hepatology. 2006, 44: 352-359.PubMed
7.
go back to reference Feld JJ, Nanda S, Huang Y, Chen W, Cam M, Pusek SN, Schweigler LM, Theodore D, Zacks SL, Liang TJ, Fried MW: Hepatic gene expression during treatment with peginterferon and ribavirin: Identifying molecular pathways for treatment response. Hepatology. 2007, 46: 1548-1563.PubMedCentralPubMed Feld JJ, Nanda S, Huang Y, Chen W, Cam M, Pusek SN, Schweigler LM, Theodore D, Zacks SL, Liang TJ, Fried MW: Hepatic gene expression during treatment with peginterferon and ribavirin: Identifying molecular pathways for treatment response. Hepatology. 2007, 46: 1548-1563.PubMedCentralPubMed
8.
go back to reference Okamoto Y, Folco EJ, Minami M, Wara AK, Feinberg MW, Sukhova GK, Colvin RA, Kihara S, Funahashi T, Luster AD, Libby P: Adiponectin inhibits the production of CXC receptor 3 chemokine ligands in macrophages and reduces T-lymphocyte recruitment in atherogenesis. Circ Res. 2008, 102: 218-225.PubMed Okamoto Y, Folco EJ, Minami M, Wara AK, Feinberg MW, Sukhova GK, Colvin RA, Kihara S, Funahashi T, Luster AD, Libby P: Adiponectin inhibits the production of CXC receptor 3 chemokine ligands in macrophages and reduces T-lymphocyte recruitment in atherogenesis. Circ Res. 2008, 102: 218-225.PubMed
9.
go back to reference Costa C, Rufino R, Traves SL, Lapa ESJR, Barnes PJ, Donnelly LE: CXCR3 and CCR5 chemokines in induced sputum from patients with COPD. Chest. 2008, 133: 26-33.PubMed Costa C, Rufino R, Traves SL, Lapa ESJR, Barnes PJ, Donnelly LE: CXCR3 and CCR5 chemokines in induced sputum from patients with COPD. Chest. 2008, 133: 26-33.PubMed
10.
go back to reference Kim MJ, Romero R, Kim CJ, Tarca AL, Chhauy S, LaJeunesse C, Lee DC, Draghici S, Gotsch F, Kusanovic JP: Villitis of Unknown Etiology Is Associated with a Distinct Pattern of Chemokine Up-Regulation in the Feto-Maternal and Placental Compartments: Implications for Conjoint Maternal Allograft Rejection and Maternal Anti-Fetal Graft-versus-Host Disease. Journal of Immunology. 2009, 182: 3919-3927. Kim MJ, Romero R, Kim CJ, Tarca AL, Chhauy S, LaJeunesse C, Lee DC, Draghici S, Gotsch F, Kusanovic JP: Villitis of Unknown Etiology Is Associated with a Distinct Pattern of Chemokine Up-Regulation in the Feto-Maternal and Placental Compartments: Implications for Conjoint Maternal Allograft Rejection and Maternal Anti-Fetal Graft-versus-Host Disease. Journal of Immunology. 2009, 182: 3919-3927.
11.
go back to reference Patterson TA, Lobenhofer EK, Fulmer-Smentek SB, Collins PJ, Chu TM, Bao W, Fang H, Kawasaki ES, Hager J, Tikhonova IR: Performance comparison of one-color and two-color platforms within the MicroArray Quality Control (MAQC) project. Nat Biotechnol. 2006, 24: 1140-1150.PubMed Patterson TA, Lobenhofer EK, Fulmer-Smentek SB, Collins PJ, Chu TM, Bao W, Fang H, Kawasaki ES, Hager J, Tikhonova IR: Performance comparison of one-color and two-color platforms within the MicroArray Quality Control (MAQC) project. Nat Biotechnol. 2006, 24: 1140-1150.PubMed
12.
go back to reference Shi L, Reid LH, Jones WD, Shippy R, Warrington JA, Baker SC, Collins PJ, de Longueville F, Kawasaki ES, Lee KY: The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nat Biotechnol. 2006, 24: 1151-1161.PubMed Shi L, Reid LH, Jones WD, Shippy R, Warrington JA, Baker SC, Collins PJ, de Longueville F, Kawasaki ES, Lee KY: The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nat Biotechnol. 2006, 24: 1151-1161.PubMed
13.
go back to reference Eikmans M, Roos-van Groningen MC, Sijpkens YWJ, Ehrchen J, Roth J, Baelde HJ, Bajema IM, de Fijter JW, de Heer E, Bruijn JA: Expression of surfactant protein-C, S100A8, S100A9, and B cell markers in renal allografts: Investigation of the prognostic value. Journal of the American Society of Nephrology. 2005, 16: 3771-3786.PubMed Eikmans M, Roos-van Groningen MC, Sijpkens YWJ, Ehrchen J, Roth J, Baelde HJ, Bajema IM, de Fijter JW, de Heer E, Bruijn JA: Expression of surfactant protein-C, S100A8, S100A9, and B cell markers in renal allografts: Investigation of the prognostic value. Journal of the American Society of Nephrology. 2005, 16: 3771-3786.PubMed
14.
go back to reference Tannapfel A, Geissler F, Witzigmann H, Hauss J, Wittekind C: Analysis of liver allograft rejection related genes using cDNA-microarrays in liver allograft specimen. Transplantation Proceedings. 2001, 33: 3283-3284.PubMed Tannapfel A, Geissler F, Witzigmann H, Hauss J, Wittekind C: Analysis of liver allograft rejection related genes using cDNA-microarrays in liver allograft specimen. Transplantation Proceedings. 2001, 33: 3283-3284.PubMed
15.
go back to reference Sreekumar R, Rasmussen DL, Wiesner RH, Charlton MR: Differential allograft gene expression in acute cellular rejection and recurrence of hepatitis C after liver transplantation. Liver Transplantation. 2002, 8: 814-821.PubMed Sreekumar R, Rasmussen DL, Wiesner RH, Charlton MR: Differential allograft gene expression in acute cellular rejection and recurrence of hepatitis C after liver transplantation. Liver Transplantation. 2002, 8: 814-821.PubMed
16.
go back to reference Inkinen K, Lahesmaa R, Brandt A, Katajamaa M, Halme L, Hockerstedt K, Lautenschlager I: DNA microarray-based gene expression profiles of cytomegalovirus infection and acute rejection in liver transplants. Transplantation Proceedings. 2005, 37: 1227-1229.PubMed Inkinen K, Lahesmaa R, Brandt A, Katajamaa M, Halme L, Hockerstedt K, Lautenschlager I: DNA microarray-based gene expression profiles of cytomegalovirus infection and acute rejection in liver transplants. Transplantation Proceedings. 2005, 37: 1227-1229.PubMed
17.
go back to reference Gimino VJ, Lande JD, Berryman TR, King RA, Hertz MI: Gene expression profiling of bronchoalveolar lavage cells in acute lung rejection. American Journal of Respiratory and Critical Care Medicine. 2003, 168: 1237-1242.PubMed Gimino VJ, Lande JD, Berryman TR, King RA, Hertz MI: Gene expression profiling of bronchoalveolar lavage cells in acute lung rejection. American Journal of Respiratory and Critical Care Medicine. 2003, 168: 1237-1242.PubMed
18.
go back to reference Patil J, Lande JD, Li N, Berryman TR, King RA, Hertz MI: Bronchoalveolar lavage cell gene expression in acute lung rejection: Development of a diagnostic classifier. Transplantation. 2008, 85: 224-231.PubMed Patil J, Lande JD, Li N, Berryman TR, King RA, Hertz MI: Bronchoalveolar lavage cell gene expression in acute lung rejection: Development of a diagnostic classifier. Transplantation. 2008, 85: 224-231.PubMed
19.
go back to reference Karason K, Jernas M, Hagg DA, Svensson PA: Evaluation of CXCL9 and CXCL10 as circulating biomarkers of human cardiac allograft rejection. BMC CardiovascDisord. 2006, 6: 29- Karason K, Jernas M, Hagg DA, Svensson PA: Evaluation of CXCL9 and CXCL10 as circulating biomarkers of human cardiac allograft rejection. BMC CardiovascDisord. 2006, 6: 29-
20.
go back to reference Bradley BA: Prognostic assays for rejection and tolerance in organ transplantation. Transplant Immunology. 2005, 14: 193-201.PubMed Bradley BA: Prognostic assays for rejection and tolerance in organ transplantation. Transplant Immunology. 2005, 14: 193-201.PubMed
21.
go back to reference Akalin E, Hendrix RC, Polavarapu RG, Pearson TC, Neylan JF, Larsen CP, Lakkis FG: Gene expression analysis in human renal allograft biopsy samples using high-density oligoarray technology. Transplantation. 2001, 72: 948-953.PubMed Akalin E, Hendrix RC, Polavarapu RG, Pearson TC, Neylan JF, Larsen CP, Lakkis FG: Gene expression analysis in human renal allograft biopsy samples using high-density oligoarray technology. Transplantation. 2001, 72: 948-953.PubMed
22.
go back to reference Sarwal M, Chua MS, Kambham N, Hsieh SC, Satterwhite T, Masek M, Salvatierra O: Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling. New England Journal of Medicine. 2003, 349: 125-138.PubMed Sarwal M, Chua MS, Kambham N, Hsieh SC, Satterwhite T, Masek M, Salvatierra O: Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling. New England Journal of Medicine. 2003, 349: 125-138.PubMed
23.
go back to reference Flechner SM, Kurian SM, Head SR, Sharp SM, Whisenant TC, Zhang J, Chismar JD, Horvath S, Mondala T, Gilmartin T: Kidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytes. American Journal of Transplantation. 2004, 4: 1475-1489.PubMedCentralPubMed Flechner SM, Kurian SM, Head SR, Sharp SM, Whisenant TC, Zhang J, Chismar JD, Horvath S, Mondala T, Gilmartin T: Kidney transplant rejection and tissue injury by gene profiling of biopsies and peripheral blood lymphocytes. American Journal of Transplantation. 2004, 4: 1475-1489.PubMedCentralPubMed
24.
go back to reference Reeve J, Einecke G, Mengel M, Sis B, Kayser N, Kaplan B, Halloran PF: Diagnosing Rejection in Renal Transplants: A Comparison of Molecular- and Histopathology-Based Approaches. American Journal of Transplantation. 2009, 9: 1802-1810.PubMed Reeve J, Einecke G, Mengel M, Sis B, Kayser N, Kaplan B, Halloran PF: Diagnosing Rejection in Renal Transplants: A Comparison of Molecular- and Histopathology-Based Approaches. American Journal of Transplantation. 2009, 9: 1802-1810.PubMed
25.
go back to reference Morgun A, Shulzhenko N, Perez-Diez A, Diniz VZ, Sanson GF, Almeida DR, Matzinger P, Gerbase-DeLima M: Molecular profiling improves diagnoses of rejection and infection in transplanted organs. Circulation Research. 2006, 98: E74-E83.PubMed Morgun A, Shulzhenko N, Perez-Diez A, Diniz VZ, Sanson GF, Almeida DR, Matzinger P, Gerbase-DeLima M: Molecular profiling improves diagnoses of rejection and infection in transplanted organs. Circulation Research. 2006, 98: E74-E83.PubMed
26.
go back to reference Saint-Mezard P, Berthier CC, Zhang H, Hertig A, Kaiser S, Schumacher M, Wieczorek G, Bigaud M, Kehren J, Rondeau E: Analysis of independent microarray datasets of renal biopsies identifies a robust transcript signature of acute allograft rejection. Transplant International. 2009, 22: 293-302.PubMed Saint-Mezard P, Berthier CC, Zhang H, Hertig A, Kaiser S, Schumacher M, Wieczorek G, Bigaud M, Kehren J, Rondeau E: Analysis of independent microarray datasets of renal biopsies identifies a robust transcript signature of acute allograft rejection. Transplant International. 2009, 22: 293-302.PubMed
27.
go back to reference Chen R, Sigdel TK, Li L, Kambham N, Dudley JT, Hsieh SC, Klassen RB, Chen A, Caohuu T, Morgan AA: Differentially expressed RNA from public microarray data identifies serum protein biomarkers for cross-organ transplant rejection and other conditions. PLoS Comput Biol. 2010, 6: Chen R, Sigdel TK, Li L, Kambham N, Dudley JT, Hsieh SC, Klassen RB, Chen A, Caohuu T, Morgan AA: Differentially expressed RNA from public microarray data identifies serum protein biomarkers for cross-organ transplant rejection and other conditions. PLoS Comput Biol. 2010, 6:
28.
go back to reference Asaoka T, Kato T, Marubashi S, Dono K, Hama N, Takahashi H, Kobayashi S, Takeda Y, Takemasa I, Nagano H: Differential transcriptome patterns for acute cellular rejection in recipients with recurrent hepatitis C after liver transplantation. Liver Transpl. 2009, 15: 1738-1749.PubMed Asaoka T, Kato T, Marubashi S, Dono K, Hama N, Takahashi H, Kobayashi S, Takeda Y, Takemasa I, Nagano H: Differential transcriptome patterns for acute cellular rejection in recipients with recurrent hepatitis C after liver transplantation. Liver Transpl. 2009, 15: 1738-1749.PubMed
29.
go back to reference Rodder S, Scherer A, Korner M, Eisenberger U, Hertig A, Raulf F, Rondeau E, Marti HP: Meta-analyses qualify metzincins and related genes as acute rejection markers in renal transplant patients. Am J Transplant. 2010, 10: 286-297.PubMed Rodder S, Scherer A, Korner M, Eisenberger U, Hertig A, Raulf F, Rondeau E, Marti HP: Meta-analyses qualify metzincins and related genes as acute rejection markers in renal transplant patients. Am J Transplant. 2010, 10: 286-297.PubMed
30.
go back to reference Lande JD, Patil J, Li N, Berryman TR, King RA, Hertz MI: Novel insights into lung transplant rejection by microarray analysis. Proc Am Thorac Soc. 2007, 4: 44-51.PubMedCentralPubMed Lande JD, Patil J, Li N, Berryman TR, King RA, Hertz MI: Novel insights into lung transplant rejection by microarray analysis. Proc Am Thorac Soc. 2007, 4: 44-51.PubMedCentralPubMed
31.
go back to reference Mueller TF, Einecke G, Reeve J, Sis B, Mengel M, Jhangri GS, Bunnag S, Cruz J, Wishart D, Meng C: Microarray analysis of rejection in human kidney transplants using pathogenesis-based transcript sets. American Journal of Transplantation. 2007, 7: 2712-2722.PubMed Mueller TF, Einecke G, Reeve J, Sis B, Mengel M, Jhangri GS, Bunnag S, Cruz J, Wishart D, Meng C: Microarray analysis of rejection in human kidney transplants using pathogenesis-based transcript sets. American Journal of Transplantation. 2007, 7: 2712-2722.PubMed
32.
go back to reference Bunnag S, Einecket G, Reeve J, Jhangri GS, Mueller TF, Sis B, Hidalgo LG, Mengel M, Kayser D, Kaplan B, Halloran PF: Molecular Correlates of Renal Function in Kidney Transplant Biopsies. Journal of the American Society of Nephrology. 2009, 20: 1149-1160.PubMedCentralPubMed Bunnag S, Einecket G, Reeve J, Jhangri GS, Mueller TF, Sis B, Hidalgo LG, Mengel M, Kayser D, Kaplan B, Halloran PF: Molecular Correlates of Renal Function in Kidney Transplant Biopsies. Journal of the American Society of Nephrology. 2009, 20: 1149-1160.PubMedCentralPubMed
33.
go back to reference Perco P, Kainz A, Wilflingseder J, Soleiman A, Mayer B, Oberbauer R: Histogenomics: Association of Gene Expression Patterns With Histological Parameters in Kidney Biopsies. Transplantation. 2009, 87: 290-295.PubMed Perco P, Kainz A, Wilflingseder J, Soleiman A, Mayer B, Oberbauer R: Histogenomics: Association of Gene Expression Patterns With Histological Parameters in Kidney Biopsies. Transplantation. 2009, 87: 290-295.PubMed
34.
go back to reference Sis B, Jhangri GS, Bunnag S, Allanach K, Kaplan B, Halloran PF: Endothelial Gene Expression in Kidney Transplants with Alloantibody Indicates Antibody-Mediated Damage Despite Lack of C4d Staining. American Journal of Transplantation. 2009, 9: 2312-2323.PubMed Sis B, Jhangri GS, Bunnag S, Allanach K, Kaplan B, Halloran PF: Endothelial Gene Expression in Kidney Transplants with Alloantibody Indicates Antibody-Mediated Damage Despite Lack of C4d Staining. American Journal of Transplantation. 2009, 9: 2312-2323.PubMed
35.
go back to reference Sis B, Halloran PF: Endothelial transcripts uncover a previously unknown phenotype: C4d-negative antibody-mediated rejection. Current Opinion in Organ Transplantation. 2010, 15: 42-48.PubMed Sis B, Halloran PF: Endothelial transcripts uncover a previously unknown phenotype: C4d-negative antibody-mediated rejection. Current Opinion in Organ Transplantation. 2010, 15: 42-48.PubMed
36.
go back to reference Mengel M, Reeve J, Bunnag S, Einecke G, Jhangri GS, Sis B, Famulski K, Guembes-Hidalgo L, Halloran PF: Scoring Total Inflammation Is Superior to the Current Banff Inflammation Score in Predicting Outcome and the Degree of Molecular Disturbance in Renal Allografts. American Journal of Transplantation. 2009, 9: 1859-1867.PubMed Mengel M, Reeve J, Bunnag S, Einecke G, Jhangri GS, Sis B, Famulski K, Guembes-Hidalgo L, Halloran PF: Scoring Total Inflammation Is Superior to the Current Banff Inflammation Score in Predicting Outcome and the Degree of Molecular Disturbance in Renal Allografts. American Journal of Transplantation. 2009, 9: 1859-1867.PubMed
37.
go back to reference Einecke G, Mengel M, Hidalgo L, Allanach K, Famulski KS, Halloran PF: The Early Course of Kidney Allograft Rejection: Defining the Time When Rejection Begins. American Journal of Transplantation. 2009, 9: 483-493.PubMed Einecke G, Mengel M, Hidalgo L, Allanach K, Famulski KS, Halloran PF: The Early Course of Kidney Allograft Rejection: Defining the Time When Rejection Begins. American Journal of Transplantation. 2009, 9: 483-493.PubMed
38.
go back to reference Einecke G, Reeve J, Mengel M, Sis B, Bunnag S, Mueller TF, Halloran PF: Expression of B cell and immunoglobulin transcripts is a feature of inflammation in late allografts. American Journal of Transplantation. 2008, 8: 1434-1443.PubMed Einecke G, Reeve J, Mengel M, Sis B, Bunnag S, Mueller TF, Halloran PF: Expression of B cell and immunoglobulin transcripts is a feature of inflammation in late allografts. American Journal of Transplantation. 2008, 8: 1434-1443.PubMed
39.
go back to reference Hidalgo LG, Sis B, Sellares J, Campbell PM, Mengel M, Einecke G, Chang J, Halloran PF: NK cell transcripts and NK cells in kidney biopsies from patients with donor-specific antibodies: evidence for NK cell involvement in antibody-mediated rejection. Am J Transplant. 2010, 10: 1812-1822.PubMed Hidalgo LG, Sis B, Sellares J, Campbell PM, Mengel M, Einecke G, Chang J, Halloran PF: NK cell transcripts and NK cells in kidney biopsies from patients with donor-specific antibodies: evidence for NK cell involvement in antibody-mediated rejection. Am J Transplant. 2010, 10: 1812-1822.PubMed
40.
go back to reference Hidalgo LG, Einecke G, Allanach K, Mengel M, Sis B, Mueller TF, Halloran PF: The transcriptome of human cytotoxic T cells: Measuring the burden of CTL-Associated transcripts in human kidney transplants. American Journal of Transplantation. 2008, 8: 637-646.PubMed Hidalgo LG, Einecke G, Allanach K, Mengel M, Sis B, Mueller TF, Halloran PF: The transcriptome of human cytotoxic T cells: Measuring the burden of CTL-Associated transcripts in human kidney transplants. American Journal of Transplantation. 2008, 8: 637-646.PubMed
41.
go back to reference Mengel M, Chang J, Kayser D, Gwinner W, Schwarz A, Einecke G, Broecker V, Famulski K, De Freitas DG, Guembes-Hidalgo L: The Molecular Phenotype of 6-Week Protocol Biopsies from Human Renal Allografts: Reflections of Prior Injury but Not Future Course. Am J Transplant. 2010 Mengel M, Chang J, Kayser D, Gwinner W, Schwarz A, Einecke G, Broecker V, Famulski K, De Freitas DG, Guembes-Hidalgo L: The Molecular Phenotype of 6-Week Protocol Biopsies from Human Renal Allografts: Reflections of Prior Injury but Not Future Course. Am J Transplant. 2010
42.
go back to reference Mengel M, Sis B, Kim D, Chang J, Famulski KS, Hidalgo LG, Einecke G, de Freitas DG, Tymchak W, Burton J, Halloran PF: The molecular phenotype of heart transplant biopsies: relationship to histopathological and clinical variables. Am J Transplant. 2010, 10: 2105-2115.PubMed Mengel M, Sis B, Kim D, Chang J, Famulski KS, Hidalgo LG, Einecke G, de Freitas DG, Tymchak W, Burton J, Halloran PF: The molecular phenotype of heart transplant biopsies: relationship to histopathological and clinical variables. Am J Transplant. 2010, 10: 2105-2115.PubMed
43.
go back to reference Famulski KS, Einecke G, Sis B, Mengel M, Hidalgo LG, Kaplan B, Halloran PF: Defining the canonical form of T-cell-mediated rejection in human kidney transplants. Am J Transplant. 2010, 10: 810-820.PubMed Famulski KS, Einecke G, Sis B, Mengel M, Hidalgo LG, Kaplan B, Halloran PF: Defining the canonical form of T-cell-mediated rejection in human kidney transplants. Am J Transplant. 2010, 10: 810-820.PubMed
44.
go back to reference Einecke G, Kayser D, Vanslambrouck JM, Sis B, Reeve J, Mengel M, Famulski KS, Bailey CG, Rasko JE, Halloran PF: Loss of solute carriers in T cell-mediated rejection in mouse and human kidneys: an active epithelial injury-repair response. Am J Transplant. 2010, 10: 2241-2251.PubMed Einecke G, Kayser D, Vanslambrouck JM, Sis B, Reeve J, Mengel M, Famulski KS, Bailey CG, Rasko JE, Halloran PF: Loss of solute carriers in T cell-mediated rejection in mouse and human kidneys: an active epithelial injury-repair response. Am J Transplant. 2010, 10: 2241-2251.PubMed
45.
go back to reference Einecke G, Reeve J, Sis B, Mengel M, Hidalgo L, Famulski KS, Matas A, Kasiske B, Kaplan B, Halloran PF: A molecular classifier for predicting future graft loss in late kidney transplant biopsies. J Clin Invest. 2010, 120: 1862-1872.PubMedCentralPubMed Einecke G, Reeve J, Sis B, Mengel M, Hidalgo L, Famulski KS, Matas A, Kasiske B, Kaplan B, Halloran PF: A molecular classifier for predicting future graft loss in late kidney transplant biopsies. J Clin Invest. 2010, 120: 1862-1872.PubMedCentralPubMed
46.
go back to reference Mengel M, Allanach K, Einecke G, Sis B, Hidalgo L, Mueller T, Halloran PF: Comparing microarray versus RT-PCR assessment of renal allograft biopsies: Similar performance despite different dynamic ranges. American Journal of Transplantation. 2008, 8: 349-349. Mengel M, Allanach K, Einecke G, Sis B, Hidalgo L, Mueller T, Halloran PF: Comparing microarray versus RT-PCR assessment of renal allograft biopsies: Similar performance despite different dynamic ranges. American Journal of Transplantation. 2008, 8: 349-349.
47.
go back to reference Pham MX, Teuteberg JJ, Kfoury AG, Starling RC, Deng MC, Cappola TP, Kao A, Anderson AS, Cotts WG, Ewald GA: Gene-expression profiling for rejection surveillance after cardiac transplantation. N Engl J Med. 2010, 362: 1890-1900.PubMed Pham MX, Teuteberg JJ, Kfoury AG, Starling RC, Deng MC, Cappola TP, Kao A, Anderson AS, Cotts WG, Ewald GA: Gene-expression profiling for rejection surveillance after cardiac transplantation. N Engl J Med. 2010, 362: 1890-1900.PubMed
48.
go back to reference Schaub S, Nickerson P, Rush D, Mayr M, Hess C, Golian M, Stefura W, HayGlass K: Urinary CXCL9 and CXCL10 Levels Correlate with the Extent of Subclinical Tubulitis. American Journal of Transplantation. 2009, 9: 1347-1353.PubMed Schaub S, Nickerson P, Rush D, Mayr M, Hess C, Golian M, Stefura W, HayGlass K: Urinary CXCL9 and CXCL10 Levels Correlate with the Extent of Subclinical Tubulitis. American Journal of Transplantation. 2009, 9: 1347-1353.PubMed
49.
go back to reference Hauser IA, Spiegler S, Kiss E, Gauer S, Sichler O, Scheuermann EH, Ackermann H, Pfeilschifter JM, Geiger H, Grone HJ, Radeke HH: Prediction of acute renal allograft rejection by urinary monokine induced by IFN-gamma (MIG). Journal of the American Society of Nephrology. 2005, 16: 1849-1858.PubMed Hauser IA, Spiegler S, Kiss E, Gauer S, Sichler O, Scheuermann EH, Ackermann H, Pfeilschifter JM, Geiger H, Grone HJ, Radeke HH: Prediction of acute renal allograft rejection by urinary monokine induced by IFN-gamma (MIG). Journal of the American Society of Nephrology. 2005, 16: 1849-1858.PubMed
50.
go back to reference Hu HZ, Aizenstein BD, Puchalski A, Burmania JA, Hamawy MM, Knechtle SJ: Elevation of CXCR3-binding chemokines in urine indicates acute renal-allograft dysfunction. American Journal of Transplantation. 2004, 4: 432-437.PubMed Hu HZ, Aizenstein BD, Puchalski A, Burmania JA, Hamawy MM, Knechtle SJ: Elevation of CXCR3-binding chemokines in urine indicates acute renal-allograft dysfunction. American Journal of Transplantation. 2004, 4: 432-437.PubMed
51.
go back to reference Tatapudi RR, Muthukumar T, Dadhania D, Ding R, Li BG, Sharma VK, Lozada-Pastorio E, Seetharamu N, Hartono C, Serur D: Noninvasive detection of renal allograft inflammation by measurements of mRNA for IP-10 and CXCR3 in urine. Kidney International. 2004, 65: 2390-2397.PubMed Tatapudi RR, Muthukumar T, Dadhania D, Ding R, Li BG, Sharma VK, Lozada-Pastorio E, Seetharamu N, Hartono C, Serur D: Noninvasive detection of renal allograft inflammation by measurements of mRNA for IP-10 and CXCR3 in urine. Kidney International. 2004, 65: 2390-2397.PubMed
52.
go back to reference Hidalgo LG, Urmson J, Ramassar V, Halloran PF: IFN-gamma directly modulates lymphocyte cytotoxicity. Faseb Journal. 2002, 16: A1086-A1086. Hidalgo LG, Urmson J, Ramassar V, Halloran PF: IFN-gamma directly modulates lymphocyte cytotoxicity. Faseb Journal. 2002, 16: A1086-A1086.
53.
go back to reference Hidalgo LG, Urmson J, Halloran PF: IFN-gamma decreases CTL generation by limiting IL-2 production: A feedback loop controlling effector cell production. American Journal of Transplantation. 2005, 5: 651-661.PubMed Hidalgo LG, Urmson J, Halloran PF: IFN-gamma decreases CTL generation by limiting IL-2 production: A feedback loop controlling effector cell production. American Journal of Transplantation. 2005, 5: 651-661.PubMed
54.
go back to reference Hidalgo LG, Halloran PF: Role of IFN-gamma in allograft rejection. Critical Reviews in Immunology. 2002, 22: 317-349.PubMed Hidalgo LG, Halloran PF: Role of IFN-gamma in allograft rejection. Critical Reviews in Immunology. 2002, 22: 317-349.PubMed
55.
go back to reference Schoenborn JR, Wilson CB: Regulation of interferon-gamma during innate and adaptive immune responses. Advances in Immunology. 2007, 96: 41-101.PubMed Schoenborn JR, Wilson CB: Regulation of interferon-gamma during innate and adaptive immune responses. Advances in Immunology. 2007, 96: 41-101.PubMed
56.
go back to reference Kirk AD, Bollinger RR, Finn OJ: Rapid, Comprehensive Analysis of Human Cytokine Messenger-Rna and Its Application to the Study of Acute Renal-Allograft Rejection. Human Immunology. 1995, 43: 113-128.PubMed Kirk AD, Bollinger RR, Finn OJ: Rapid, Comprehensive Analysis of Human Cytokine Messenger-Rna and Its Application to the Study of Acute Renal-Allograft Rejection. Human Immunology. 1995, 43: 113-128.PubMed
57.
go back to reference Moudgil A, Bagga A, Toyoda M, Nicolaidou E, Jordan SC, Ross D: Expression of gamma-IFN mRNA in bronchoalveolar lavage fluid correlates with early acute allograft rejection in lung transplant recipients. Clinical Transplantation. 1999, 13: 201-207.PubMed Moudgil A, Bagga A, Toyoda M, Nicolaidou E, Jordan SC, Ross D: Expression of gamma-IFN mRNA in bronchoalveolar lavage fluid correlates with early acute allograft rejection in lung transplant recipients. Clinical Transplantation. 1999, 13: 201-207.PubMed
58.
go back to reference Nast CC, Zuo XJ, Prehn J, Danovitch GM, Wilkinson A, Jordan SC: Gamma-Interferon Gene-Expression in Human Renal-Allograft Fine-Needle Aspirates. Transplantation. 1994, 57: 498-502.PubMed Nast CC, Zuo XJ, Prehn J, Danovitch GM, Wilkinson A, Jordan SC: Gamma-Interferon Gene-Expression in Human Renal-Allograft Fine-Needle Aspirates. Transplantation. 1994, 57: 498-502.PubMed
59.
go back to reference Lande JD, Gimino VJ, Hertz MI, King RA: Characterization of lung allograft rejection using microarray gene expression profiling. American Journal of Human Genetics. 2002, 71: 392-392. Lande JD, Gimino VJ, Hertz MI, King RA: Characterization of lung allograft rejection using microarray gene expression profiling. American Journal of Human Genetics. 2002, 71: 392-392.
60.
go back to reference Pos Z, Selleri S, Spivey TL, Wang JK, Liu H, Worschech A, Sabatino M, Monaco A, Leitman SF, Falus A: Genomic scale analysis of racial impact on response to IFN-alpha. Proceedings of the National Academy of Sciences of the United States of America. 2010, 107: 803-808.PubMedCentralPubMed Pos Z, Selleri S, Spivey TL, Wang JK, Liu H, Worschech A, Sabatino M, Monaco A, Leitman SF, Falus A: Genomic scale analysis of racial impact on response to IFN-alpha. Proceedings of the National Academy of Sciences of the United States of America. 2010, 107: 803-808.PubMedCentralPubMed
61.
go back to reference de Veer MJ, Holko M, Frevel M, Walker E, Der S, Paranjape JM, Silverman RH, Williams BRG: Functional classification of interferon-stimulated genes identified using microarrays. Journal of Leukocyte Biology. 2001, 69: 912-920.PubMed de Veer MJ, Holko M, Frevel M, Walker E, Der S, Paranjape JM, Silverman RH, Williams BRG: Functional classification of interferon-stimulated genes identified using microarrays. Journal of Leukocyte Biology. 2001, 69: 912-920.PubMed
62.
go back to reference Reeve J, Einecke G, Kaplan B, Halloran PF: A microarray-based classifier for diagnosing rejection in kidney transplants: The top diagnostic genes for rejection are interferon-gamma induced. American Journal of Transplantation. 2008, 8: 246-246. Reeve J, Einecke G, Kaplan B, Halloran PF: A microarray-based classifier for diagnosing rejection in kidney transplants: The top diagnostic genes for rejection are interferon-gamma induced. American Journal of Transplantation. 2008, 8: 246-246.
63.
go back to reference Ramassar V, Urmson J, Hobart M, Goes N, Halloran PF: Class II transactivator (CIITA) mediates the in vivo induction of class II in mouse tissues. Faseb Journal. 1996, 10: 2262-2262. Ramassar V, Urmson J, Hobart M, Goes N, Halloran PF: Class II transactivator (CIITA) mediates the in vivo induction of class II in mouse tissues. Faseb Journal. 1996, 10: 2262-2262.
64.
go back to reference Goes N, Hobart M, Ramassar V, Halloran PF: Role of IFN-gamma and IRF-1 in injury-induced and basal MHC class I and II expression. Faseb Journal. 1996, 10: 2184-2184. Goes N, Hobart M, Ramassar V, Halloran PF: Role of IFN-gamma and IRF-1 in injury-induced and basal MHC class I and II expression. Faseb Journal. 1996, 10: 2184-2184.
66.
go back to reference Ramsey SA, Klemm SL, Zak DE, Kennedy KA, Thorsson V, Li B, Gilchrist M, Gold ES, Johnson CD, Litvak V: Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics. Plos Computational Biology. 2008, 4: Ramsey SA, Klemm SL, Zak DE, Kennedy KA, Thorsson V, Li B, Gilchrist M, Gold ES, Johnson CD, Litvak V: Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics. Plos Computational Biology. 2008, 4:
67.
go back to reference Yeruva S, Ramadori G, Raddatz D: NF-kappa B-dependent synergistic regulation of CXCL10 gene expression by IL-1 beta and IFN-gamma in human intestinal epithelial cell lines. International Journal of Colorectal Disease. 2008, 23: 305-317.PubMedCentralPubMed Yeruva S, Ramadori G, Raddatz D: NF-kappa B-dependent synergistic regulation of CXCL10 gene expression by IL-1 beta and IFN-gamma in human intestinal epithelial cell lines. International Journal of Colorectal Disease. 2008, 23: 305-317.PubMedCentralPubMed
68.
go back to reference Liu JG, Guan XQ, Ma XJ: Interferon regulatory factor 1 is an essential and direct transcriptional activator for interferon gamma-induced RANTES/CC15 expression in macrophages. Journal of Biological Chemistry. 2005, 280: 24347-24355.PubMed Liu JG, Guan XQ, Ma XJ: Interferon regulatory factor 1 is an essential and direct transcriptional activator for interferon gamma-induced RANTES/CC15 expression in macrophages. Journal of Biological Chemistry. 2005, 280: 24347-24355.PubMed
69.
go back to reference Zhao DXM, Hu YY, Miller GG, Luster AD, Mitchell RN, Libby P: Differential expression of the IFN-gamma-inducible CXCR3-binding chemokines, IFN-inducible protein 10, monokine induced by IFN, and IFN-inducible T cell alpha chemoattractant in human cardiac allografts: Association with cardiac allograft vasculopathy and acute rejection. Journal of Immunology. 2002, 169: 1556-1560. Zhao DXM, Hu YY, Miller GG, Luster AD, Mitchell RN, Libby P: Differential expression of the IFN-gamma-inducible CXCR3-binding chemokines, IFN-inducible protein 10, monokine induced by IFN, and IFN-inducible T cell alpha chemoattractant in human cardiac allografts: Association with cardiac allograft vasculopathy and acute rejection. Journal of Immunology. 2002, 169: 1556-1560.
70.
go back to reference Fahmy NM, Yamani MH, Starling RC, Ratliff NB, Young JB, McCarthy PM, Feng JY, Novick AC, Fairchild RL: Chemokine and chemokine receptor gene expression indicates acute rejection of human cardiac transplants. Transplantation. 2003, 75: 72-78.PubMed Fahmy NM, Yamani MH, Starling RC, Ratliff NB, Young JB, McCarthy PM, Feng JY, Novick AC, Fairchild RL: Chemokine and chemokine receptor gene expression indicates acute rejection of human cardiac transplants. Transplantation. 2003, 75: 72-78.PubMed
71.
go back to reference Belperio JA, Keane MP, Burdick MD, Lynch JP, Zisman DA, Xue YY, Li KW, Ardehali A, Ross DJ, Strieter RM: Role of CXCL9/CXCR3 chemokine biology during pathogenesis of acute lung allograft rejection. Journal of Immunology. 2003, 171: 4844-4852. Belperio JA, Keane MP, Burdick MD, Lynch JP, Zisman DA, Xue YY, Li KW, Ardehali A, Ross DJ, Strieter RM: Role of CXCL9/CXCR3 chemokine biology during pathogenesis of acute lung allograft rejection. Journal of Immunology. 2003, 171: 4844-4852.
72.
go back to reference Melter M, Exeni A, Reinders MEJ, Fang JC, McMahon G, Ganz P, Hancock WW, Briscoe DM: Expression of the chemokine receptor CXCR3 and its ligand IP-10 during human cardiac allograft rejection. Circulation. 2001, 104: 2558-2564.PubMed Melter M, Exeni A, Reinders MEJ, Fang JC, McMahon G, Ganz P, Hancock WW, Briscoe DM: Expression of the chemokine receptor CXCR3 and its ligand IP-10 during human cardiac allograft rejection. Circulation. 2001, 104: 2558-2564.PubMed
73.
go back to reference Fischereder M, Luckow B, Hocher B, Wuthrich RP, Rothenpieler U, Schneeberger H, Panzer U, Stahl RAK, Hauser IA, Budde K: CC chemokine receptor 5 and renal-transplant survival. Lancet. 2001, 357: 1758-1761.PubMed Fischereder M, Luckow B, Hocher B, Wuthrich RP, Rothenpieler U, Schneeberger H, Panzer U, Stahl RAK, Hauser IA, Budde K: CC chemokine receptor 5 and renal-transplant survival. Lancet. 2001, 357: 1758-1761.PubMed
74.
go back to reference Heidenhain C, Pulhl G, Moench C, Lautem A, Neuhaus P: Chemokine receptor 5 Delta 32 mutation reduces the risk of acute rejection in liver transplantation. Annals of Transplantation. 2009, 14: 36-44.PubMed Heidenhain C, Pulhl G, Moench C, Lautem A, Neuhaus P: Chemokine receptor 5 Delta 32 mutation reduces the risk of acute rejection in liver transplantation. Annals of Transplantation. 2009, 14: 36-44.PubMed
75.
go back to reference Hancock WW, Lu B, Gao W, Csizmadia V, Faia K, King JA, Smiley ST, Ling M, Gerard NP, Gerard C: Requirement of the chemokine receptor CXCR3 for acute allograft rejection. Journal of Experimental Medicine. 2000, 192: 1515-1519.PubMedCentralPubMed Hancock WW, Lu B, Gao W, Csizmadia V, Faia K, King JA, Smiley ST, Ling M, Gerard NP, Gerard C: Requirement of the chemokine receptor CXCR3 for acute allograft rejection. Journal of Experimental Medicine. 2000, 192: 1515-1519.PubMedCentralPubMed
76.
go back to reference Hancock WW, Gao W, Csizmadia V, Faia KL, Shemmeri N, Luster AD: Donor-derived IP-10 initiates development of acute allograft rejection. Journal of Experimental Medicine. 2001, 193: 975-980.PubMedCentralPubMed Hancock WW, Gao W, Csizmadia V, Faia KL, Shemmeri N, Luster AD: Donor-derived IP-10 initiates development of acute allograft rejection. Journal of Experimental Medicine. 2001, 193: 975-980.PubMedCentralPubMed
77.
go back to reference Hancock WW, Wang LQ, Ye QR, Han RX, Lee I: Chemokines and their receptors as markers of allograft rejection and targets for immunosuppression. Current Opinion in Immunology. 2003, 15: 479-486.PubMed Hancock WW, Wang LQ, Ye QR, Han RX, Lee I: Chemokines and their receptors as markers of allograft rejection and targets for immunosuppression. Current Opinion in Immunology. 2003, 15: 479-486.PubMed
78.
go back to reference Gao W, Faia KL, Csizmadia V, Smiley ST, Soler D, King JA, Danoff TM, Hancock WW: Beneficial effects of targeting CCR5 in allograft recipients. Transplantation. 2001, 72: 1199-1205.PubMed Gao W, Faia KL, Csizmadia V, Smiley ST, Soler D, King JA, Danoff TM, Hancock WW: Beneficial effects of targeting CCR5 in allograft recipients. Transplantation. 2001, 72: 1199-1205.PubMed
79.
go back to reference Gao P, Zhou XY, Yashiro-Ohtani Y, Yang YF, Sugimoto N, Ono S, Nakanishi T, Obika S, Imanishi T, Egawa T: The unique target specificity of a nonpeptide chemokine receptor antagonist: selective blockade of two Th1 chemokine receptors CCR5 and CXCR3. Journal of Leukocyte Biology. 2003, 73: 273-280.PubMed Gao P, Zhou XY, Yashiro-Ohtani Y, Yang YF, Sugimoto N, Ono S, Nakanishi T, Obika S, Imanishi T, Egawa T: The unique target specificity of a nonpeptide chemokine receptor antagonist: selective blockade of two Th1 chemokine receptors CCR5 and CXCR3. Journal of Leukocyte Biology. 2003, 73: 273-280.PubMed
80.
go back to reference Halloran PF, Fairchild RL: The puzzling role of CXCR3 and its ligands in organ allograft rejection. American Journal of Transplantation. 2008, 8: 1578-1579.PubMed Halloran PF, Fairchild RL: The puzzling role of CXCR3 and its ligands in organ allograft rejection. American Journal of Transplantation. 2008, 8: 1578-1579.PubMed
81.
go back to reference Haskova Z, Izawa A, Contreras AG, Flynn E, Boulday G, Briscoe DM: Organ-specific differences in the function of MCP-1 and CXCR3 during cardiac and skin allograft rejection. Transplantation. 2007, 83: 1595-1601.PubMed Haskova Z, Izawa A, Contreras AG, Flynn E, Boulday G, Briscoe DM: Organ-specific differences in the function of MCP-1 and CXCR3 during cardiac and skin allograft rejection. Transplantation. 2007, 83: 1595-1601.PubMed
82.
go back to reference Kwun J, Hazinedaroglu SM, Schadde E, Kayaoglu HA, Fechner J, Hu HZ, Roenneburg D, Torrealba J, Shiao L, Hong X: Unaltered graft survival and intragraft lymphocytes infiltration in the cardiac allograft of Cxcr3(-/-) mouse recipients. American Journal of Transplantation. 2008, 8: 1593-1603.PubMed Kwun J, Hazinedaroglu SM, Schadde E, Kayaoglu HA, Fechner J, Hu HZ, Roenneburg D, Torrealba J, Shiao L, Hong X: Unaltered graft survival and intragraft lymphocytes infiltration in the cardiac allograft of Cxcr3(-/-) mouse recipients. American Journal of Transplantation. 2008, 8: 1593-1603.PubMed
83.
go back to reference Zerwes HG, Li J, Kovarik J, Streiff M, Hofmann M, Roth L, Luyten M, Pally C, Loewe RP, Wieczorek G: The chemokine receptor Cxcr3 is not essential for acute cardiac allograft rejection in mice and rats. American Journal of Transplantation. 2008, 8: 1604-1613.PubMed Zerwes HG, Li J, Kovarik J, Streiff M, Hofmann M, Roth L, Luyten M, Pally C, Loewe RP, Wieczorek G: The chemokine receptor Cxcr3 is not essential for acute cardiac allograft rejection in mice and rats. American Journal of Transplantation. 2008, 8: 1604-1613.PubMed
84.
go back to reference Morris MA, Ley K: Trafficking of natural killer cells. Curr Mol Med. 2004, 4: 431-438.PubMed Morris MA, Ley K: Trafficking of natural killer cells. Curr Mol Med. 2004, 4: 431-438.PubMed
85.
go back to reference Murphy PM, Baggiolini M, Charo IF, Hebert CA, Horuk R, Matsushima K, Miller LH, Oppenheim JJ, Power CA: International union of pharmacology. XXII. Nomenclature for chemokine receptors. Pharmacological Reviews. 2000, 52: 145-176.PubMed Murphy PM, Baggiolini M, Charo IF, Hebert CA, Horuk R, Matsushima K, Miller LH, Oppenheim JJ, Power CA: International union of pharmacology. XXII. Nomenclature for chemokine receptors. Pharmacological Reviews. 2000, 52: 145-176.PubMed
86.
go back to reference Moser B, Wolf M, Walz A, Loetscher P: Chemokines: multiple levels of leukocyte migration control. Trends in Immunology. 2004, 25: 75-84.PubMed Moser B, Wolf M, Walz A, Loetscher P: Chemokines: multiple levels of leukocyte migration control. Trends in Immunology. 2004, 25: 75-84.PubMed
87.
go back to reference Deola S, Panelli MC, Maric D, Selleri S, Dmitrieva NI, Voss CY, Klein H, Stroncek D, Wang E, Marincola FM: Helper B cells promote cytotoxic T cell survival and proliferation independently of antigen presentation through CD27/CD70 interactions. Journal of Immunology. 2008, 180: 1362-1372. Deola S, Panelli MC, Maric D, Selleri S, Dmitrieva NI, Voss CY, Klein H, Stroncek D, Wang E, Marincola FM: Helper B cells promote cytotoxic T cell survival and proliferation independently of antigen presentation through CD27/CD70 interactions. Journal of Immunology. 2008, 180: 1362-1372.
88.
go back to reference Hoffmann U, Sergerer S, Rummele P, Kruger B, Pietrzyk M, Hofstadter F, Banas B, Kramer BK: Expression of the chemokine receptor CXCR3 in human renal allografts-a prospective study. Nephrology Dialysis Transplantation. 2006, 21: 1373-1381. Hoffmann U, Sergerer S, Rummele P, Kruger B, Pietrzyk M, Hofstadter F, Banas B, Kramer BK: Expression of the chemokine receptor CXCR3 in human renal allografts-a prospective study. Nephrology Dialysis Transplantation. 2006, 21: 1373-1381.
89.
go back to reference Xanthou G, Duchesnes CE, Williams TJ, Pease JE: CCR3 functional responses are regulated by both CXCR3 and its ligands CXCL9, CXCL10 and CXCL11. Eur J Immunol. 2003, 33: 2241-2250.PubMed Xanthou G, Duchesnes CE, Williams TJ, Pease JE: CCR3 functional responses are regulated by both CXCR3 and its ligands CXCL9, CXCL10 and CXCL11. Eur J Immunol. 2003, 33: 2241-2250.PubMed
90.
go back to reference Halloran PF: T cell-mediated rejection of kidney transplants: a personal viewpoint. Am J Transplant. 2010, 10: 1126-1134.PubMed Halloran PF: T cell-mediated rejection of kidney transplants: a personal viewpoint. Am J Transplant. 2010, 10: 1126-1134.PubMed
91.
go back to reference Qin SX, Rottman JB, Myers P, Kassam N, Weinblatt M, Loetscher M, Koch AE, Moser B, Mackay CR: The chemokine receptors CXCR3 and CCR5 mark subsets of T cells associated with certain inflammatory reactions. Journal of Clinical Investigation. 1998, 101: 746-754.PubMedCentralPubMed Qin SX, Rottman JB, Myers P, Kassam N, Weinblatt M, Loetscher M, Koch AE, Moser B, Mackay CR: The chemokine receptors CXCR3 and CCR5 mark subsets of T cells associated with certain inflammatory reactions. Journal of Clinical Investigation. 1998, 101: 746-754.PubMedCentralPubMed
92.
go back to reference Jones D, Benjamin RJ, Shahsafaei A, Dorfman DM: The chemokine receptor CXCR3 is expressed in a subset of B-cell lymphomas and is a marker of B-cell chronic lymphocytic leukemia. Blood. 2000, 95: 627-632.PubMed Jones D, Benjamin RJ, Shahsafaei A, Dorfman DM: The chemokine receptor CXCR3 is expressed in a subset of B-cell lymphomas and is a marker of B-cell chronic lymphocytic leukemia. Blood. 2000, 95: 627-632.PubMed
93.
go back to reference Drayton DL, Liao S, Mounzer RH, Ruddle NH: Lymphoid organ development: from ontogeny to neogenesis. Nat Immunol. 2006, 7: 344-353.PubMed Drayton DL, Liao S, Mounzer RH, Ruddle NH: Lymphoid organ development: from ontogeny to neogenesis. Nat Immunol. 2006, 7: 344-353.PubMed
94.
95.
go back to reference Obara H, Nagasaki K, Hsieh CL, Ogura Y, Esquivel CO, Martinez OM, Krams SM: IFN-gamma, produced by NK cells that infiltrate liver allografts early after transplantation, links the innate and adaptive immune responses. Am J Transplant. 2005, 5: 2094-2103.PubMedCentralPubMed Obara H, Nagasaki K, Hsieh CL, Ogura Y, Esquivel CO, Martinez OM, Krams SM: IFN-gamma, produced by NK cells that infiltrate liver allografts early after transplantation, links the innate and adaptive immune responses. Am J Transplant. 2005, 5: 2094-2103.PubMedCentralPubMed
96.
go back to reference Kondo T, Morita K, Watarai Y, Auerbach MB, Taub DD, Novick AC, Toma H, Fairchild RL: Early increased chemokine expression and production in murine allogeneic skin grafts is mediated by natural killer cells. Transplantation. 2000, 69: 969-977.PubMed Kondo T, Morita K, Watarai Y, Auerbach MB, Taub DD, Novick AC, Toma H, Fairchild RL: Early increased chemokine expression and production in murine allogeneic skin grafts is mediated by natural killer cells. Transplantation. 2000, 69: 969-977.PubMed
97.
go back to reference Larosa DF, Rahman AH, Turka LA: The innate immune system in allograft rejection and tolerance. Journal of Immunology. 2007, 178: 7503-7509. Larosa DF, Rahman AH, Turka LA: The innate immune system in allograft rejection and tolerance. Journal of Immunology. 2007, 178: 7503-7509.
98.
go back to reference Kitchens WH, Uehara S, Chase CM, Colvin RB, Russell PS, Madsen JC: The changing role of natural killer cells in solid organ rejection and tolerance. Transplantation. 2006, 81: 811-817.PubMed Kitchens WH, Uehara S, Chase CM, Colvin RB, Russell PS, Madsen JC: The changing role of natural killer cells in solid organ rejection and tolerance. Transplantation. 2006, 81: 811-817.PubMed
99.
go back to reference Bingaman AW, Ha J, Waitze SY, Durham MM, Cho HR, Tucker-Burden C, Hendrix R, Cowan SR, Pearson TC, Larsen CP: Vigorous allograft rejection in the absence of danger. Journal of Immunology. 2000, 164: 3065-3071. Bingaman AW, Ha J, Waitze SY, Durham MM, Cho HR, Tucker-Burden C, Hendrix R, Cowan SR, Pearson TC, Larsen CP: Vigorous allograft rejection in the absence of danger. Journal of Immunology. 2000, 164: 3065-3071.
100.
go back to reference Worschech A, Chen NH, Yu YA, Zhang Q, Pos Z, Weibel S, Raab V, Sabatino M, Monaco A, Liu H: Systemic treatment of xenografts with vaccinia virus GLV-1h68 reveals the immunologic facet of oncolytic therapy. Bmc Genomics. 2009, 10: Worschech A, Chen NH, Yu YA, Zhang Q, Pos Z, Weibel S, Raab V, Sabatino M, Monaco A, Liu H: Systemic treatment of xenografts with vaccinia virus GLV-1h68 reveals the immunologic facet of oncolytic therapy. Bmc Genomics. 2009, 10:
101.
go back to reference Andersen CB, Ladefoged SD, Larsen S: Acute Kidney Graft-Rejection - A Morphological and Immunohistological Study on Zero-Hour and Follow-Up Biopsies with Special Emphasis on Cellular Infiltrates and Adhesion Molecules. Apmis. 1994, 102: 23-37.PubMed Andersen CB, Ladefoged SD, Larsen S: Acute Kidney Graft-Rejection - A Morphological and Immunohistological Study on Zero-Hour and Follow-Up Biopsies with Special Emphasis on Cellular Infiltrates and Adhesion Molecules. Apmis. 1994, 102: 23-37.PubMed
102.
go back to reference Meehan SM, McCluskey RT, Pascual M, Preffer FI, Anderson P, Schlossman SF, Colvin RB: Cytotoxicity and apoptosis in human renal allografts: Identification, distribution, and quantitation of cells with a cytotoxic granule protein GMP-17 (TIA-1) and cells with fragmented nuclear DNA. Laboratory Investigation. 1997, 76: 639-649.PubMed Meehan SM, McCluskey RT, Pascual M, Preffer FI, Anderson P, Schlossman SF, Colvin RB: Cytotoxicity and apoptosis in human renal allografts: Identification, distribution, and quantitation of cells with a cytotoxic granule protein GMP-17 (TIA-1) and cells with fragmented nuclear DNA. Laboratory Investigation. 1997, 76: 639-649.PubMed
103.
go back to reference Sagoo P, Perucha E, Sawitzki B, Tomiuk S, Stephens DA, Miqueu P, Chapman S, Craciun L, Sergeant R, Brouard S: Development of a cross-platform biomarker signature to detect renal transplant tolerance in humans. J Clin Invest. 2010, 120: 1848-1861.PubMedCentralPubMed Sagoo P, Perucha E, Sawitzki B, Tomiuk S, Stephens DA, Miqueu P, Chapman S, Craciun L, Sergeant R, Brouard S: Development of a cross-platform biomarker signature to detect renal transplant tolerance in humans. J Clin Invest. 2010, 120: 1848-1861.PubMedCentralPubMed
104.
go back to reference Cassese G, Lindenau S, de Boer B, Arce S, Hauser A, Riemekasten G, Berek C, Hiepe F, Krenn V, Radbruch A, Manz RA: Inflamed kidneys of NZB/W mice are a major site for the homeostasis of plasma cells. European Journal of Immunology. 2001, 31: 2726-2732.PubMed Cassese G, Lindenau S, de Boer B, Arce S, Hauser A, Riemekasten G, Berek C, Hiepe F, Krenn V, Radbruch A, Manz RA: Inflamed kidneys of NZB/W mice are a major site for the homeostasis of plasma cells. European Journal of Immunology. 2001, 31: 2726-2732.PubMed
105.
go back to reference Magalhaes R, Stiehl P, Morawietz L, Berek C, Krenn V: Morphological and molecular pathology of the B cell response in synovitis of rheumatoid arthritis. Virchows Archiv. 2002, 441: 415-427.PubMed Magalhaes R, Stiehl P, Morawietz L, Berek C, Krenn V: Morphological and molecular pathology of the B cell response in synovitis of rheumatoid arthritis. Virchows Archiv. 2002, 441: 415-427.PubMed
106.
go back to reference Platt JL, Lebien TW, Michael AF: Interstitial Mononuclear Cell-Populations in Renal Graft-Rejection - Identification by Monoclonal-Antibodies in Tissue-Sections. Journal of Experimental Medicine. 1982, 155: 17-30.PubMedCentralPubMed Platt JL, Lebien TW, Michael AF: Interstitial Mononuclear Cell-Populations in Renal Graft-Rejection - Identification by Monoclonal-Antibodies in Tissue-Sections. Journal of Experimental Medicine. 1982, 155: 17-30.PubMedCentralPubMed
107.
go back to reference Zarkhin V, Sarwal MM: Microarrays: Monitoring for Transplant Tolerance and Mechanistic Insights. Clinics in Laboratory Medicine. 2008, 28: 385-+.PubMed Zarkhin V, Sarwal MM: Microarrays: Monitoring for Transplant Tolerance and Mechanistic Insights. Clinics in Laboratory Medicine. 2008, 28: 385-+.PubMed
108.
go back to reference Racusen LC, Colvin RB, Solez K, Mihatsch MJ, Halloran PF, Campbell PM, Cecka MJ, Cosyns JP, Demetris AJ, Fishbein MC: Antibody-mediated rejection criteria - an addition to the Banff '97 Classification of Renal Allograft Rejection. American Journal of Transplantation. 2003, 3: 708-714.PubMed Racusen LC, Colvin RB, Solez K, Mihatsch MJ, Halloran PF, Campbell PM, Cecka MJ, Cosyns JP, Demetris AJ, Fishbein MC: Antibody-mediated rejection criteria - an addition to the Banff '97 Classification of Renal Allograft Rejection. American Journal of Transplantation. 2003, 3: 708-714.PubMed
109.
go back to reference Alausa M, Almagro U, Siddiqi N, Zuiderweg R, Medipalli R, Hariharan S: Refractory acute kidney transplant rejection with CD20 graft infiltrates and successful therapy with rituximab. Clinical Transplantation. 2005, 19: 137-140.PubMed Alausa M, Almagro U, Siddiqi N, Zuiderweg R, Medipalli R, Hariharan S: Refractory acute kidney transplant rejection with CD20 graft infiltrates and successful therapy with rituximab. Clinical Transplantation. 2005, 19: 137-140.PubMed
110.
go back to reference Bagnasco SM, Tsai W, Rahman MH, Kraus ES, Barisoni L, Vega R, Racusen LC, Haas M, Mohammed BS, Zachary AA, Montgomery RA: CD20-positive infiltrates in renal allograft biopsies with acute cellular rejection are not associated with worse graft survival. American Journal of Transplantation. 2007, 7: 1968-1973.PubMed Bagnasco SM, Tsai W, Rahman MH, Kraus ES, Barisoni L, Vega R, Racusen LC, Haas M, Mohammed BS, Zachary AA, Montgomery RA: CD20-positive infiltrates in renal allograft biopsies with acute cellular rejection are not associated with worse graft survival. American Journal of Transplantation. 2007, 7: 1968-1973.PubMed
111.
go back to reference Doria C, di Francesco F, Ramirez CB, Frank A, Iaria M, Francos G, Marino IR, Farber JL: The presence of B-cell nodules does not necessarily portend a less favorable outcome to therapy in patients with acute cellular rejection of a renal allograft. Transplantation Proceedings. 2006, 38: 3441-3444.PubMed Doria C, di Francesco F, Ramirez CB, Frank A, Iaria M, Francos G, Marino IR, Farber JL: The presence of B-cell nodules does not necessarily portend a less favorable outcome to therapy in patients with acute cellular rejection of a renal allograft. Transplantation Proceedings. 2006, 38: 3441-3444.PubMed
112.
go back to reference Hippen BE, DeMattos A, Cook WJ, Kew CE, Gaston RS: Association of CD20+infiltrates with poorer clinical outcomes in acute cellular rejection of renal allografts. American Journal of Transplantation. 2005, 5: 2248-2252.PubMed Hippen BE, DeMattos A, Cook WJ, Kew CE, Gaston RS: Association of CD20+infiltrates with poorer clinical outcomes in acute cellular rejection of renal allografts. American Journal of Transplantation. 2005, 5: 2248-2252.PubMed
113.
go back to reference Kayler LK, Lakkis FG, Morgan C, Basu A, Blisard D, Tan HP, Shapiro R, Randhawa PS: Acute cellular rejection with CD20-Positive lymphoid clusters in kidney transplant patients following lymphocyte depletion. American Journal of Transplantation. 2007, 7: 357-357. Kayler LK, Lakkis FG, Morgan C, Basu A, Blisard D, Tan HP, Shapiro R, Randhawa PS: Acute cellular rejection with CD20-Positive lymphoid clusters in kidney transplant patients following lymphocyte depletion. American Journal of Transplantation. 2007, 7: 357-357.
114.
go back to reference Krukemeyer MG, Moeller J, Morawietz L, Rudolph B, Neumann U, Theruvath T, Neuhaus P, Krenn V: Description of B lymphocytes and plasma cells, complement, and chemokines/receptors in acute liver allograft rejection. Transplantation. 2004, 78: 65-70.PubMed Krukemeyer MG, Moeller J, Morawietz L, Rudolph B, Neumann U, Theruvath T, Neuhaus P, Krenn V: Description of B lymphocytes and plasma cells, complement, and chemokines/receptors in acute liver allograft rejection. Transplantation. 2004, 78: 65-70.PubMed
115.
go back to reference Tsai EW, Rianthavorn P, Gjertson DW, Wallace WD, Reed EF, Ettenger RB: CD20+lymphocytes in renal allografts are associated with poor graft survival in pediatric patients. Transplantation. 2006, 82: 1769-1773.PubMed Tsai EW, Rianthavorn P, Gjertson DW, Wallace WD, Reed EF, Ettenger RB: CD20+lymphocytes in renal allografts are associated with poor graft survival in pediatric patients. Transplantation. 2006, 82: 1769-1773.PubMed
116.
go back to reference Mengel M, Bogers J, Bosmans JL, Seron D, Moreso F, Carrera M, Gwinner W, Schwarz A, De Broe M, Kreipe H, Haller H: Incidence of C4d stain in protocol biopsies from renal allografts: Results from a multicenter trial. American Journal of Transplantation. 2005, 5: 1050-1056.PubMed Mengel M, Bogers J, Bosmans JL, Seron D, Moreso F, Carrera M, Gwinner W, Schwarz A, De Broe M, Kreipe H, Haller H: Incidence of C4d stain in protocol biopsies from renal allografts: Results from a multicenter trial. American Journal of Transplantation. 2005, 5: 1050-1056.PubMed
117.
go back to reference Martins HL, Silva C, Martini D, Noronha IL: Detection of B lymphocytes (CD20(+)) in renal allograft biopsy specimens. Transplantation Proceedings. 2007, 39: 432-434.PubMed Martins HL, Silva C, Martini D, Noronha IL: Detection of B lymphocytes (CD20(+)) in renal allograft biopsy specimens. Transplantation Proceedings. 2007, 39: 432-434.PubMed
118.
go back to reference Zarkhin V, Kambham N, Li L, Kwok S, Hsieh SC, Salvatierra O, Sarwal MM: Characterization of intra-graft B cells during renal allograft rejection. Kidney International. 2008, 74: 664-673.PubMed Zarkhin V, Kambham N, Li L, Kwok S, Hsieh SC, Salvatierra O, Sarwal MM: Characterization of intra-graft B cells during renal allograft rejection. Kidney International. 2008, 74: 664-673.PubMed
119.
go back to reference Noorchashm H, Reed AJ, Rostami SY, Mozaffari R, Zekavat G, Koeberlein B, Caton AJ, Naji A: B cell-mediated antigen presentation is required for the pathogenesis of acute cardiac allograft rejection. Journal of Immunology. 2006, 177: 7715-7722. Noorchashm H, Reed AJ, Rostami SY, Mozaffari R, Zekavat G, Koeberlein B, Caton AJ, Naji A: B cell-mediated antigen presentation is required for the pathogenesis of acute cardiac allograft rejection. Journal of Immunology. 2006, 177: 7715-7722.
120.
go back to reference Schultz KR, Klarnet JP, Gieni RS, Hayglass KT, Greenberg PD: The Role of B-Cells for Invivo T-Cell Responses to A Friend Virus-Induced Leukemia. Science. 1990, 249: 921-923.PubMed Schultz KR, Klarnet JP, Gieni RS, Hayglass KT, Greenberg PD: The Role of B-Cells for Invivo T-Cell Responses to A Friend Virus-Induced Leukemia. Science. 1990, 249: 921-923.PubMed
121.
go back to reference Yang X, Brunham RC: Gene knockout B cell-deficient mice demonstrate that B cells play an important role in the initiation of T cell responses to Chlamydia trachomatis (mouse pneumonitis) lung infection. Journal of Immunology. 1998, 161: 1439-1446. Yang X, Brunham RC: Gene knockout B cell-deficient mice demonstrate that B cells play an important role in the initiation of T cell responses to Chlamydia trachomatis (mouse pneumonitis) lung infection. Journal of Immunology. 1998, 161: 1439-1446.
122.
go back to reference Cross AH, Stark JL, Lauber J, Ramsbottom MJ, Lyons JA: Rituximab reduces B cells and T cells in cerebrospinal fluid of multiple sclerosis patients. Journal of Neuroimmunology. 2006, 180: 63-70.PubMedCentralPubMed Cross AH, Stark JL, Lauber J, Ramsbottom MJ, Lyons JA: Rituximab reduces B cells and T cells in cerebrospinal fluid of multiple sclerosis patients. Journal of Neuroimmunology. 2006, 180: 63-70.PubMedCentralPubMed
123.
go back to reference Ascierto M, Kmieciak M, Idowu M, Manjili R, Zhao Y, Nikizad H, Grimes M, Dumur C, Wang E, Wang X: A signature of immune function genes associated with recurrence-free survival in breast cancer patients. Breast Cancer Resarch and Treatment. 2011 Ascierto M, Kmieciak M, Idowu M, Manjili R, Zhao Y, Nikizad H, Grimes M, Dumur C, Wang E, Wang X: A signature of immune function genes associated with recurrence-free survival in breast cancer patients. Breast Cancer Resarch and Treatment. 2011
124.
go back to reference Zarkhin V, Chalasani G, Sarwal MM: The yin and yang of B cells in graft rejection and tolerance. Transplant Rev (Orlando). 2010, 24: 67-78. Zarkhin V, Chalasani G, Sarwal MM: The yin and yang of B cells in graft rejection and tolerance. Transplant Rev (Orlando). 2010, 24: 67-78.
125.
go back to reference Tyden G, Genberg H, Tollemar J, Ekberg H, Persson NH, Tufveson G, Wadstrom J, Gabel M, Mjornstedt L: A randomized, doubleblind, placebo-controlled, study of single-dose rituximab as induction in renal transplantation. Transplantation. 2009, 87: 1325-1329.PubMed Tyden G, Genberg H, Tollemar J, Ekberg H, Persson NH, Tufveson G, Wadstrom J, Gabel M, Mjornstedt L: A randomized, doubleblind, placebo-controlled, study of single-dose rituximab as induction in renal transplantation. Transplantation. 2009, 87: 1325-1329.PubMed
126.
go back to reference Clatworthy MR, Watson CJ, Plotnek G, Bardsley V, Chaudhry AN, Bradley JA, Smith KG: B-cell-depleting induction therapy and acute cellular rejection. N Engl J Med. 2009, 360: 2683-2685.PubMedCentralPubMed Clatworthy MR, Watson CJ, Plotnek G, Bardsley V, Chaudhry AN, Bradley JA, Smith KG: B-cell-depleting induction therapy and acute cellular rejection. N Engl J Med. 2009, 360: 2683-2685.PubMedCentralPubMed
127.
go back to reference Bedognetti D, Zoppoli G, Massucco C, Zanardi E, Zupo S, Bruzzone A, Sertoli MR, Balleari E, Racchi O, Messina M: Impaired response to influenza vaccine associated with persistent memory B cell depletion in non-Hodgkin's lymphoma patients treated with rituximab-containing regimens. J Immunol. 2011, 186: 6044-55.PubMedCentralPubMed Bedognetti D, Zoppoli G, Massucco C, Zanardi E, Zupo S, Bruzzone A, Sertoli MR, Balleari E, Racchi O, Messina M: Impaired response to influenza vaccine associated with persistent memory B cell depletion in non-Hodgkin's lymphoma patients treated with rituximab-containing regimens. J Immunol. 2011, 186: 6044-55.PubMedCentralPubMed
128.
go back to reference Newell KA, Asare A, Kirk AD, Gisler TD, Bourcier K, Suthanthiran M, Burlingham WJ, Marks WH, Sanz I, Lechler RI: Identification of a B cell signature associated with renal transplant tolerance in humans. J Clin Invest. 2010, 120: 1836-1847.PubMedCentralPubMed Newell KA, Asare A, Kirk AD, Gisler TD, Bourcier K, Suthanthiran M, Burlingham WJ, Marks WH, Sanz I, Lechler RI: Identification of a B cell signature associated with renal transplant tolerance in humans. J Clin Invest. 2010, 120: 1836-1847.PubMedCentralPubMed
129.
go back to reference Louis S, Braudeau C, Giral M, Dupont A, Moizant F, Robillard N, Moreau A, Soulillou JP, Brouard S: Contrasting CD25hiCD4+T cells/FOXP3 patterns in chronic rejection and operational drug-free tolerance. Transplantation. 2006, 81: 398-407.PubMed Louis S, Braudeau C, Giral M, Dupont A, Moizant F, Robillard N, Moreau A, Soulillou JP, Brouard S: Contrasting CD25hiCD4+T cells/FOXP3 patterns in chronic rejection and operational drug-free tolerance. Transplantation. 2006, 81: 398-407.PubMed
130.
go back to reference Pallier A, Hillion S, Danger R, Giral M, Racape M, Degauque N, Dugast E, Ashton-Chess J, Pettre S, Lozano JJ: Patients with drug-free long-term graft function display increased numbers of peripheral B cells with a memory and inhibitory phenotype. Kidney Int. 2010, 78: 503-513.PubMed Pallier A, Hillion S, Danger R, Giral M, Racape M, Degauque N, Dugast E, Ashton-Chess J, Pettre S, Lozano JJ: Patients with drug-free long-term graft function display increased numbers of peripheral B cells with a memory and inhibitory phenotype. Kidney Int. 2010, 78: 503-513.PubMed
131.
go back to reference Sharma R, Jarjour WN, Zheng L, Gaskin F, Fu SM, Ju ST: Large functional repertoire of regulatory T-cell suppressible autoimmune T cells in scurfy mice. J Autoimmun. 2007, 29: 10-19.PubMedCentralPubMed Sharma R, Jarjour WN, Zheng L, Gaskin F, Fu SM, Ju ST: Large functional repertoire of regulatory T-cell suppressible autoimmune T cells in scurfy mice. J Autoimmun. 2007, 29: 10-19.PubMedCentralPubMed
132.
go back to reference Wildin RS, Freitas A: IPEX and FOXP3: clinical and research perspectives. J Autoimmun. 2005, 56-62. 25 Suppl Wildin RS, Freitas A: IPEX and FOXP3: clinical and research perspectives. J Autoimmun. 2005, 56-62. 25 Suppl
133.
go back to reference Lee WS, Park S, Lee WY, Yun SH, Chun HK: Clinical impact of tumor-infiltrating lymphocytes for survival in stage II colon cancer. Cancer. 2010, 116: 5188-5199.PubMed Lee WS, Park S, Lee WY, Yun SH, Chun HK: Clinical impact of tumor-infiltrating lymphocytes for survival in stage II colon cancer. Cancer. 2010, 116: 5188-5199.PubMed
134.
go back to reference Correale P, Rotundo MS, Del Vecchio MT, Remondo C, Migali C, Ginanneschi C, Tsang KY, Licchetta A, Mannucci S, Loiacono L: Regulatory (FoxP3+) T-cell tumor infiltration is a favorable prognostic factor in advanced colon cancer patients undergoing chemo or chemoimmunotherapy. J Immunother. 2010, 33: 435-441.PubMed Correale P, Rotundo MS, Del Vecchio MT, Remondo C, Migali C, Ginanneschi C, Tsang KY, Licchetta A, Mannucci S, Loiacono L: Regulatory (FoxP3+) T-cell tumor infiltration is a favorable prognostic factor in advanced colon cancer patients undergoing chemo or chemoimmunotherapy. J Immunother. 2010, 33: 435-441.PubMed
135.
go back to reference Muthukumar T, Dadhania D, Ding R, Snopkowski C, Naqvi R, Lee JB, Hartono C, Li B, Sharma VK, Seshan SV: Messenger RNA for FOXP3 in the urine of renal-allograft recipients. N Engl J Med. 2005, 353: 2342-2351.PubMed Muthukumar T, Dadhania D, Ding R, Snopkowski C, Naqvi R, Lee JB, Hartono C, Li B, Sharma VK, Seshan SV: Messenger RNA for FOXP3 in the urine of renal-allograft recipients. N Engl J Med. 2005, 353: 2342-2351.PubMed
136.
go back to reference Bunnag S, Allanach K, Jhangri GS, Sis B, Einecke G, Mengel M, Mueller TF, Halloran PF: FOXP3 expression in human kidney transplant biopsies is associated with rejection and time post transplant but not with favorable outcomes. American Journal of Transplantation. 2008, 8: 1423-1433.PubMed Bunnag S, Allanach K, Jhangri GS, Sis B, Einecke G, Mengel M, Mueller TF, Halloran PF: FOXP3 expression in human kidney transplant biopsies is associated with rejection and time post transplant but not with favorable outcomes. American Journal of Transplantation. 2008, 8: 1423-1433.PubMed
137.
go back to reference Matzinger P: The danger model: A renewed sense of self. Science. 2002, 296: 301-305.PubMed Matzinger P: The danger model: A renewed sense of self. Science. 2002, 296: 301-305.PubMed
138.
go back to reference Vabulas RM, Ahmad-Nejad P, Ghose S, Kirschning CJ, Issels RD, Wagner H: HSP70 as endogenous stimulus of the toll/interleukin-1 receptor signal pathway. Journal of Biological Chemistry. 2002, 277: 15107-15112.PubMed Vabulas RM, Ahmad-Nejad P, Ghose S, Kirschning CJ, Issels RD, Wagner H: HSP70 as endogenous stimulus of the toll/interleukin-1 receptor signal pathway. Journal of Biological Chemistry. 2002, 277: 15107-15112.PubMed
139.
go back to reference Platanias LC: Mechanisms of type-I- and type-II-interferon-mediated signalling. Nature Reviews Immunology. 2005, 5: 375-386.PubMed Platanias LC: Mechanisms of type-I- and type-II-interferon-mediated signalling. Nature Reviews Immunology. 2005, 5: 375-386.PubMed
140.
go back to reference Reich NC, Liu L: Tracking STAT nuclear traffic. Nature Reviews Immunology. 2006, 6: 602-612.PubMed Reich NC, Liu L: Tracking STAT nuclear traffic. Nature Reviews Immunology. 2006, 6: 602-612.PubMed
141.
go back to reference Muller-Ladner U, Alten R, Heiligenhaus A, Kekow J, Koletzko S, Mrowietz U, Ochsenkuhn T, Radke M, Reich K, Rudwaleit M, Schreiber S: "TRECID", TNF alpha related chronic inflammatory diseases - A new multiple diseases bridging concept. Deutsche Medizinische Wochenschrift. 2009, 134: 2132-2136.PubMed Muller-Ladner U, Alten R, Heiligenhaus A, Kekow J, Koletzko S, Mrowietz U, Ochsenkuhn T, Radke M, Reich K, Rudwaleit M, Schreiber S: "TRECID", TNF alpha related chronic inflammatory diseases - A new multiple diseases bridging concept. Deutsche Medizinische Wochenschrift. 2009, 134: 2132-2136.PubMed
142.
go back to reference Connolly MK, Bedrosian AS, Clair JMS, Mitchell AP, Ibrahim J, Stroud A, Pachter HL, Bar-Sagi D, Frey AB, Miller G: In liver fibrosis, dendritic cells govern hepatic inflammation in mice via TNF-alpha. Journal of Clinical Investigation. 2009, 119: 3213-3225.PubMedCentralPubMed Connolly MK, Bedrosian AS, Clair JMS, Mitchell AP, Ibrahim J, Stroud A, Pachter HL, Bar-Sagi D, Frey AB, Miller G: In liver fibrosis, dendritic cells govern hepatic inflammation in mice via TNF-alpha. Journal of Clinical Investigation. 2009, 119: 3213-3225.PubMedCentralPubMed
143.
go back to reference Le Moine A, Goldman M, Abramowicz D: Multiple pathways to allograft rejection. Transplantation. 2002, 73: 1373-1381.PubMed Le Moine A, Goldman M, Abramowicz D: Multiple pathways to allograft rejection. Transplantation. 2002, 73: 1373-1381.PubMed
144.
go back to reference Bonizzi G, Karin M: The two NF-kappa B activation pathways and their role in innate and adaptive immunity. Trends in Immunology. 2004, 25: 280-288.PubMed Bonizzi G, Karin M: The two NF-kappa B activation pathways and their role in innate and adaptive immunity. Trends in Immunology. 2004, 25: 280-288.PubMed
145.
go back to reference Akira S, Uematsu S, Takeuchi O: Pathogen recognition and innate immunity. Cell. 2006, 124: 783-801.PubMed Akira S, Uematsu S, Takeuchi O: Pathogen recognition and innate immunity. Cell. 2006, 124: 783-801.PubMed
146.
go back to reference Iwasaki A, Medzhitov R: Toll-like receptor control of the adaptive immune responses. Nature Immunology. 2004, 5: 987-995.PubMed Iwasaki A, Medzhitov R: Toll-like receptor control of the adaptive immune responses. Nature Immunology. 2004, 5: 987-995.PubMed
147.
go back to reference Brent L: The 50th anniversary of the discovery of immunologic tolerance. New England Journal of Medicine. 2003, 349: 1381-1383.PubMed Brent L: The 50th anniversary of the discovery of immunologic tolerance. New England Journal of Medicine. 2003, 349: 1381-1383.PubMed
148.
go back to reference Brouard S, Mansfield E, Braud C, Li L, Giral M, Hsieh SC, Baeten D, Zhang M, Ashton-Chess J, Braudeau C: Identification of a peripheral blood transcriptional biomarker panel associated with operational renal allograft tolerance. Proceedings of the National Academy of Sciences of the United States of America. 2007, 104: 15448-15453.PubMedCentralPubMed Brouard S, Mansfield E, Braud C, Li L, Giral M, Hsieh SC, Baeten D, Zhang M, Ashton-Chess J, Braudeau C: Identification of a peripheral blood transcriptional biomarker panel associated with operational renal allograft tolerance. Proceedings of the National Academy of Sciences of the United States of America. 2007, 104: 15448-15453.PubMedCentralPubMed
149.
go back to reference Lin T, Zhou WD, Sacks SH: The role of complement and Toll-like receptors in organ transplantation. Transplant International. 2007, 20: 481-489.PubMed Lin T, Zhou WD, Sacks SH: The role of complement and Toll-like receptors in organ transplantation. Transplant International. 2007, 20: 481-489.PubMed
150.
go back to reference Sacks S, Lee Q, Wong W, Zhou W: The role of complement in regulating the alloresponse. Current Opinion in Organ Transplantation. 2009, 14: 10-15.PubMed Sacks S, Lee Q, Wong W, Zhou W: The role of complement in regulating the alloresponse. Current Opinion in Organ Transplantation. 2009, 14: 10-15.PubMed
151.
go back to reference Sacks SH, Chowdhury P, Zhou WD: Role of the complement system in rejection. Current Opinion in Immunology. 2003, 15: 487-492.PubMed Sacks SH, Chowdhury P, Zhou WD: Role of the complement system in rejection. Current Opinion in Immunology. 2003, 15: 487-492.PubMed
152.
go back to reference Lee JI, Burckart GJ: Nuclear factor kappa B: Important transcription factor and therapeutic target. Journal of Clinical Pharmacology. 1998, 38: 981-993.PubMed Lee JI, Burckart GJ: Nuclear factor kappa B: Important transcription factor and therapeutic target. Journal of Clinical Pharmacology. 1998, 38: 981-993.PubMed
153.
go back to reference Schreiber J, Jenner RG, Murray HL, Gerber GK, Gifford DK, Young RA: Coordinated binding of NF-kappa B family members in the response of human cells to lipopolysaccharide. Proceedings of the National Academy of Sciences of the United States of America. 2006, 103: 5899-5904.PubMedCentralPubMed Schreiber J, Jenner RG, Murray HL, Gerber GK, Gifford DK, Young RA: Coordinated binding of NF-kappa B family members in the response of human cells to lipopolysaccharide. Proceedings of the National Academy of Sciences of the United States of America. 2006, 103: 5899-5904.PubMedCentralPubMed
154.
go back to reference Peng Q, Li K, Patel H, Sacks SH, Zhou WD: Dendritic cell synthesis of C3 is required for full T cell activation and development of a Th1 phenotype. Journal of Immunology. 2006, 176: 3330-3341. Peng Q, Li K, Patel H, Sacks SH, Zhou WD: Dendritic cell synthesis of C3 is required for full T cell activation and development of a Th1 phenotype. Journal of Immunology. 2006, 176: 3330-3341.
155.
go back to reference Kawamoto S, Yalcindag A, Laouini D, Brodeur S, Bryce P, Lu B, Humbles AA, Oettgen H, Gerard C, Geha RS: The anaphylatoxin C3a downregulates the Th2 response to epicutaneously introduced antigen. Journal of Clinical Investigation. 2004, 114: 399-407.PubMedCentralPubMed Kawamoto S, Yalcindag A, Laouini D, Brodeur S, Bryce P, Lu B, Humbles AA, Oettgen H, Gerard C, Geha RS: The anaphylatoxin C3a downregulates the Th2 response to epicutaneously introduced antigen. Journal of Clinical Investigation. 2004, 114: 399-407.PubMedCentralPubMed
156.
go back to reference Carroll MC: The complement system in B cell regulation. Molecular Immunology. 2004, 41: 141-146.PubMed Carroll MC: The complement system in B cell regulation. Molecular Immunology. 2004, 41: 141-146.PubMed
157.
go back to reference Pratt JR, Basheer SA, Sacks SH: Local synthesis of complement component C3 regulates acute renal transplant rejection. Nature Medicine. 2002, 8: 582-587.PubMed Pratt JR, Basheer SA, Sacks SH: Local synthesis of complement component C3 regulates acute renal transplant rejection. Nature Medicine. 2002, 8: 582-587.PubMed
158.
go back to reference Li K, Patel H, Farrar CA, Hargreaves REG, Sacks SH, Zhou WD: Complement activation regulates the capacity of proximal tubular epithelial cell to stimulate alloreactive T cell response. Journal of the American Society of Nephrology. 2004, 15: 2414-2422.PubMed Li K, Patel H, Farrar CA, Hargreaves REG, Sacks SH, Zhou WD: Complement activation regulates the capacity of proximal tubular epithelial cell to stimulate alloreactive T cell response. Journal of the American Society of Nephrology. 2004, 15: 2414-2422.PubMed
159.
go back to reference Cordoba SP, Wang CM, Williams R, Li J, Smit L, Sharland A, Allen R, McCaughan G, Bishop A: Gene array analysis of a rat model of liver transplant tolerance identifies increased complement C3 and the STAT-1/IRF-1 pathway during tolerance induction. Liver Transplantation. 2006, 12: 636-643.PubMed Cordoba SP, Wang CM, Williams R, Li J, Smit L, Sharland A, Allen R, McCaughan G, Bishop A: Gene array analysis of a rat model of liver transplant tolerance identifies increased complement C3 and the STAT-1/IRF-1 pathway during tolerance induction. Liver Transplantation. 2006, 12: 636-643.PubMed
160.
go back to reference Fujino M, Kitazawa Y, Kawasaki M, Funeshima N, Kimura H, Nakajima T, Saito H, Li XK: Differences in lymphocyte gene expression between tolerant and syngeneic liver grafted rats. Liver Transplantation. 2004, 10: 379-391.PubMed Fujino M, Kitazawa Y, Kawasaki M, Funeshima N, Kimura H, Nakajima T, Saito H, Li XK: Differences in lymphocyte gene expression between tolerant and syngeneic liver grafted rats. Liver Transplantation. 2004, 10: 379-391.PubMed
161.
go back to reference Pan TL, Wang PW, Huang CC, Goto S, Chen CL: Expression, by functional proteomics, of spontaneous tolerance in rat orthotopic liver transplantation. Immunology. 2004, 113: 57-64.PubMedCentralPubMed Pan TL, Wang PW, Huang CC, Goto S, Chen CL: Expression, by functional proteomics, of spontaneous tolerance in rat orthotopic liver transplantation. Immunology. 2004, 113: 57-64.PubMedCentralPubMed
162.
go back to reference Naesens M, Li L, Ying LH, Sansanwal P, Sigdel TK, Hsieh SC, Kambham N, Lerut E, Salvatierra O, Butte AJ, Sarwal MM: Expression of Complement Components Differs Between Kidney Allografts from Living and Deceased Donors. Journal of the American Society of Nephrology. 2009, 20: 1839-1851.PubMedCentralPubMed Naesens M, Li L, Ying LH, Sansanwal P, Sigdel TK, Hsieh SC, Kambham N, Lerut E, Salvatierra O, Butte AJ, Sarwal MM: Expression of Complement Components Differs Between Kidney Allografts from Living and Deceased Donors. Journal of the American Society of Nephrology. 2009, 20: 1839-1851.PubMedCentralPubMed
163.
go back to reference Moore KW, Malefyt RD, Coffman RL, O'Garra A: Interleukin-10 and the interleukin-10 receptor. Annual Review of Immunology. 2001, 19: 683-765.PubMed Moore KW, Malefyt RD, Coffman RL, O'Garra A: Interleukin-10 and the interleukin-10 receptor. Annual Review of Immunology. 2001, 19: 683-765.PubMed
164.
go back to reference Mocellin S, Panelli MC, Wang E, Nagorsen D, Marincola FM: The dual role of IL-10. Trends in Immunology. 2003, 24: 36-43.PubMed Mocellin S, Panelli MC, Wang E, Nagorsen D, Marincola FM: The dual role of IL-10. Trends in Immunology. 2003, 24: 36-43.PubMed
165.
go back to reference Mocellin S, Panelli M, Wang E, Rossi CR, Pilati P, Nitti D, Lise M, Marincola FM: IL-10 stimulatory effects on human NK cells explored by gene profile analysis. Genes and Immunity. 2004, 5: 621-630.PubMed Mocellin S, Panelli M, Wang E, Rossi CR, Pilati P, Nitti D, Lise M, Marincola FM: IL-10 stimulatory effects on human NK cells explored by gene profile analysis. Genes and Immunity. 2004, 5: 621-630.PubMed
166.
go back to reference Mocellin S, Marincola FM, Young HA: Interleukin-10 and the immune response against cancer: a counterpoint. Journal of Leukocyte Biology. 2005, 78: 1043-1051.PubMed Mocellin S, Marincola FM, Young HA: Interleukin-10 and the immune response against cancer: a counterpoint. Journal of Leukocyte Biology. 2005, 78: 1043-1051.PubMed
167.
go back to reference Tao M, Li BR, Nayini J, Sivaraman S, Song SW, Larson A, Toofanfard M, Chen H, Venugopal P, Preisler HD: In vivo effects of IL-4, IL-10, and amifostine on cytokine production in patients with acute myelogenous leukemia. Leukemia & Lymphoma. 2001, 41: 161-168. Tao M, Li BR, Nayini J, Sivaraman S, Song SW, Larson A, Toofanfard M, Chen H, Venugopal P, Preisler HD: In vivo effects of IL-4, IL-10, and amifostine on cytokine production in patients with acute myelogenous leukemia. Leukemia & Lymphoma. 2001, 41: 161-168.
168.
go back to reference Lauw FN, Pajkrt D, Hack CE, Kurimoto M, van Deventer SJH, van der Poll T: Proinflammatory effects of IL-10 during human endotoxemia. Journal of Immunology. 2000, 165: 2783-2789. Lauw FN, Pajkrt D, Hack CE, Kurimoto M, van Deventer SJH, van der Poll T: Proinflammatory effects of IL-10 during human endotoxemia. Journal of Immunology. 2000, 165: 2783-2789.
169.
go back to reference Del Vecchio M, Mortarini R, Canova S, Di Guardo L, Pimpinelli N, Sertoli MR, Bedognetti D, Queirolo P, Morosini P, Perrone T: Bevacizumab plus fotemustine as first-line treatment in metastatic melanoma patients: clinical activity and modulation of angiogenesis and lymphangiogenesis factors. Clin Cancer Res. 2010, 16: 5862-5872.PubMed Del Vecchio M, Mortarini R, Canova S, Di Guardo L, Pimpinelli N, Sertoli MR, Bedognetti D, Queirolo P, Morosini P, Perrone T: Bevacizumab plus fotemustine as first-line treatment in metastatic melanoma patients: clinical activity and modulation of angiogenesis and lymphangiogenesis factors. Clin Cancer Res. 2010, 16: 5862-5872.PubMed
170.
go back to reference Qian SG, Li W, Li YP, Fu FM, Lu LN, Fung JJ, Thomson AW: Systemic administration of cellular interleukin-10 can exacerbate cardiac allograft rejection in mice. Transplantation. 1996, 62: 1709-1714.PubMed Qian SG, Li W, Li YP, Fu FM, Lu LN, Fung JJ, Thomson AW: Systemic administration of cellular interleukin-10 can exacerbate cardiac allograft rejection in mice. Transplantation. 1996, 62: 1709-1714.PubMed
171.
go back to reference Li W, Lu L, Li Y, Fu F, Fung JJ, Thomson AW, Qian S: High-dose cellular IL-10 exacerbates rejection and reverses effects of cyclosporine and tacrolimus in mouse cardiac transplantation. Transplantation Proceedings. 1997, 29: 1081-1082.PubMed Li W, Lu L, Li Y, Fu F, Fung JJ, Thomson AW, Qian S: High-dose cellular IL-10 exacerbates rejection and reverses effects of cyclosporine and tacrolimus in mouse cardiac transplantation. Transplantation Proceedings. 1997, 29: 1081-1082.PubMed
172.
go back to reference Li W, Fu F, Lu L, Narula SK, Fung JJ, Thomson AW, Qian S: Systemic administration of anti-interleukin-10 antibody prolongs organ allograft survival in normal and presensitized recipients. Transplantation. 1998, 66: 1587-1596.PubMed Li W, Fu F, Lu L, Narula SK, Fung JJ, Thomson AW, Qian S: Systemic administration of anti-interleukin-10 antibody prolongs organ allograft survival in normal and presensitized recipients. Transplantation. 1998, 66: 1587-1596.PubMed
173.
go back to reference Karczewski J, Karczewski M, Wiktorowicz K, Glyda M: Cytometric Analysis of Th1/Th2 Cytokines in the Urine of Patients Prior to the Kideny Transplantation. Transplant International. 2009, 22: 145-145. Karczewski J, Karczewski M, Wiktorowicz K, Glyda M: Cytometric Analysis of Th1/Th2 Cytokines in the Urine of Patients Prior to the Kideny Transplantation. Transplant International. 2009, 22: 145-145.
174.
go back to reference Grinyo J, Vanrenterghem Y, Nashan B, Vincenti F, Ekberg H, Lindpaintner K, Rashford M, Nasmyth-Miller C, Voulgari A, Spleiss O: Association of four DNA polymorphisms with acute rejection after kidney transplantation. Transplant International. 2008, 21: 879-891.PubMed Grinyo J, Vanrenterghem Y, Nashan B, Vincenti F, Ekberg H, Lindpaintner K, Rashford M, Nasmyth-Miller C, Voulgari A, Spleiss O: Association of four DNA polymorphisms with acute rejection after kidney transplantation. Transplant International. 2008, 21: 879-891.PubMed
175.
go back to reference Honda K, Taniguchi T: IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors. Nature Reviews Immunology. 2006, 6: 644-658.PubMed Honda K, Taniguchi T: IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors. Nature Reviews Immunology. 2006, 6: 644-658.PubMed
176.
go back to reference Vila-del Sol V, Punzon C, Fresno M: IFN-gamma-induced TNF-alpha expression is regulated by interferon regulatory factors 1 and 8 in mouse macrophages. Journal of Immunology. 2008, 181: 4461-4470. Vila-del Sol V, Punzon C, Fresno M: IFN-gamma-induced TNF-alpha expression is regulated by interferon regulatory factors 1 and 8 in mouse macrophages. Journal of Immunology. 2008, 181: 4461-4470.
177.
go back to reference Penninger JM, Sirard C, Mittrucker HW, Chidgey A, Kozieradzki I, Nghiem M, Hakem A, Kimura T, Timms E, Boyd R: The interferon regulatory transcription factor IRF-1 controls positive and negative selection of CD8(+) thymocytes. Immunity. 1997, 7: 243-254.PubMed Penninger JM, Sirard C, Mittrucker HW, Chidgey A, Kozieradzki I, Nghiem M, Hakem A, Kimura T, Timms E, Boyd R: The interferon regulatory transcription factor IRF-1 controls positive and negative selection of CD8(+) thymocytes. Immunity. 1997, 7: 243-254.PubMed
178.
go back to reference Taki S, Sato T, Ogasawara K, Fukuda T, Sato M, Hida S, Suzuki G, Mitsuyama M, Shin EH, Kojima S: Multistage regulation of Th1-type immune responses by the transcription factor IRF-1. Immunity. 1997, 6: 673-679.PubMed Taki S, Sato T, Ogasawara K, Fukuda T, Sato M, Hida S, Suzuki G, Mitsuyama M, Shin EH, Kojima S: Multistage regulation of Th1-type immune responses by the transcription factor IRF-1. Immunity. 1997, 6: 673-679.PubMed
179.
go back to reference Ogasawara K, Hida S, Azimi N, Tagaya Y, Sato T, Yokochi-Fukuda T, Waldmann TA, Taniguchi T, Taki S: Requirement for IRF-1 in the microenvironment supporting development of natural killer cells (vol 391, pg 700, 1998). Nature. 1998, 392: 843-843. Ogasawara K, Hida S, Azimi N, Tagaya Y, Sato T, Yokochi-Fukuda T, Waldmann TA, Taniguchi T, Taki S: Requirement for IRF-1 in the microenvironment supporting development of natural killer cells (vol 391, pg 700, 1998). Nature. 1998, 392: 843-843.
180.
go back to reference Hama N, Yanagisawa Y, Dono K, Kobayashi S, Marubashi S, Nagano H, Umeshita K, Watanabe S, Uchiyama Y, Monden M: Gene Expression Profiling of Acute Cellular Rejection in Rat Liver Transplantation Using DNA Microarrays. Liver Transplantation. 2009, 15: 509-521.PubMed Hama N, Yanagisawa Y, Dono K, Kobayashi S, Marubashi S, Nagano H, Umeshita K, Watanabe S, Uchiyama Y, Monden M: Gene Expression Profiling of Acute Cellular Rejection in Rat Liver Transplantation Using DNA Microarrays. Liver Transplantation. 2009, 15: 509-521.PubMed
181.
go back to reference Stegall M, Park W, Kim D, Kremers W: Gene expression during acute allograft rejection: Novel statistical analysis of microarray data. American Journal of Transplantation. 2002, 2: 913-925.PubMed Stegall M, Park W, Kim D, Kremers W: Gene expression during acute allograft rejection: Novel statistical analysis of microarray data. American Journal of Transplantation. 2002, 2: 913-925.PubMed
182.
go back to reference Erickson LM, Pan F, Ebbs A, Kobayashi M, Jiang HS: Microarray-based gene expression profiles of allograft rejection and immunosuppression in the rat heart transplantation model. Transplantation. 2003, 76: 582-588.PubMed Erickson LM, Pan F, Ebbs A, Kobayashi M, Jiang HS: Microarray-based gene expression profiles of allograft rejection and immunosuppression in the rat heart transplantation model. Transplantation. 2003, 76: 582-588.PubMed
183.
go back to reference Kroger A, Koster M, Schroeder K, Hauser H, Mueller PP: Activities of IRF-1. Journal of Interferon and Cytokine Research. 2002, 22: 5-14.PubMed Kroger A, Koster M, Schroeder K, Hauser H, Mueller PP: Activities of IRF-1. Journal of Interferon and Cytokine Research. 2002, 22: 5-14.PubMed
184.
go back to reference Jin P, Wang E, Provenzano M, Stroncekl D, Marincoial FM: Gene expression signatures of interleukin-2 in vivo and in vitro and their relation to anticancer therapy. Critical Reviews in Immunology. 2007, 27: 437-448.PubMed Jin P, Wang E, Provenzano M, Stroncekl D, Marincoial FM: Gene expression signatures of interleukin-2 in vivo and in vitro and their relation to anticancer therapy. Critical Reviews in Immunology. 2007, 27: 437-448.PubMed
185.
go back to reference Matsuyama T, Kimura T, Kitagawa M, Pfeffer K, Kawakami T, Watanabe N, Kundig TM, Amakawa R, Kishihara K, Wakeham A: Targeted Disruption of Irf-1 Or Irf-2 Results in Abnormal Type-I Ifn Gene Induction and Aberrant Lymphocyte Development. Cell. 1993, 75: 83-97.PubMed Matsuyama T, Kimura T, Kitagawa M, Pfeffer K, Kawakami T, Watanabe N, Kundig TM, Amakawa R, Kishihara K, Wakeham A: Targeted Disruption of Irf-1 Or Irf-2 Results in Abnormal Type-I Ifn Gene Induction and Aberrant Lymphocyte Development. Cell. 1993, 75: 83-97.PubMed
186.
go back to reference Erickson L, Crews G, Pan F, Fisniku O, Jang MS, Wynn C, Kobayashi M, Jiang HS: Unique gene expression profiles of heart allograft rejection in the interferon regulatory factor-1-deficient mouse. Transplant Immunology. 2004, 13: 169-175.PubMed Erickson L, Crews G, Pan F, Fisniku O, Jang MS, Wynn C, Kobayashi M, Jiang HS: Unique gene expression profiles of heart allograft rejection in the interferon regulatory factor-1-deficient mouse. Transplant Immunology. 2004, 13: 169-175.PubMed
187.
go back to reference Mansfield ES, Sarwal MM: Arraying the orchestration of allograft pathology. American Journal of Transplantation. 2004, 4: 853-862.PubMed Mansfield ES, Sarwal MM: Arraying the orchestration of allograft pathology. American Journal of Transplantation. 2004, 4: 853-862.PubMed
188.
go back to reference Bonadies N, Neururer C, Steege A, Vallabhapurapu S, Pabst T, Mueller BU: PU.1 is regulated by NF-kappaB through a novel binding site in a 17 kb upstream enhancer element. Oncogene. 2010, 29: 1062-1072.PubMed Bonadies N, Neururer C, Steege A, Vallabhapurapu S, Pabst T, Mueller BU: PU.1 is regulated by NF-kappaB through a novel binding site in a 17 kb upstream enhancer element. Oncogene. 2010, 29: 1062-1072.PubMed
189.
go back to reference Finn PW, Stone JR, Boothby MR, Perkins DL: Inhibition of NF-kappa B-dependent T cell activation abrogates acute allograft rejection. Journal of Immunology. 2001, 167: 5994-6001. Finn PW, Stone JR, Boothby MR, Perkins DL: Inhibition of NF-kappa B-dependent T cell activation abrogates acute allograft rejection. Journal of Immunology. 2001, 167: 5994-6001.
190.
go back to reference Basil CF, Zhao YD, Zavaglia K, Jin P, Panelli MC, Voiculescu S, Mandruzzato S, Lee HM, Seliger B, Freedman RS: Common cancer biomarkers. Cancer Research. 2006, 66: 2953-2961.PubMed Basil CF, Zhao YD, Zavaglia K, Jin P, Panelli MC, Voiculescu S, Mandruzzato S, Lee HM, Seliger B, Freedman RS: Common cancer biomarkers. Cancer Research. 2006, 66: 2953-2961.PubMed
191.
go back to reference Tiao MM, Lu L, Tao R, Wang L, Fung JJ, Qian SG: Prolongation of cardiac allograft survival by systemic administration of immature recipient dendritic cells deficient in NF-kappa B activity. Annals of Surgery. 2005, 241: 497-505.PubMedCentralPubMed Tiao MM, Lu L, Tao R, Wang L, Fung JJ, Qian SG: Prolongation of cardiac allograft survival by systemic administration of immature recipient dendritic cells deficient in NF-kappa B activity. Annals of Surgery. 2005, 241: 497-505.PubMedCentralPubMed
192.
go back to reference Ohmori K, Takeda S, Miyoshi S, Minami M, Nakane S, Ohta M, Sawa Y, Matsuda H: Attenuation of lung injury in allograft rejection using NF-kappa B decoy transfection - novel strategy for use in lung transplantation. European Journal of Cardio-Thoracic Surgery. 2005, 27: 23-27.PubMed Ohmori K, Takeda S, Miyoshi S, Minami M, Nakane S, Ohta M, Sawa Y, Matsuda H: Attenuation of lung injury in allograft rejection using NF-kappa B decoy transfection - novel strategy for use in lung transplantation. European Journal of Cardio-Thoracic Surgery. 2005, 27: 23-27.PubMed
193.
go back to reference Zhou P, Hwang KW, Palucki DA, Guo Z, Boothby M, Newell KA, Alegre ML: Impaired NF-kappa B activation in T cells permits tolerance to primary heart allografts and to secondary donor skin grafts. American Journal of Transplantation. 2003, 3: 139-147.PubMed Zhou P, Hwang KW, Palucki DA, Guo Z, Boothby M, Newell KA, Alegre ML: Impaired NF-kappa B activation in T cells permits tolerance to primary heart allografts and to secondary donor skin grafts. American Journal of Transplantation. 2003, 3: 139-147.PubMed
194.
go back to reference Marincola FM, Wang E: Immunologic signatures of rejection. 2010, New York, NY: Springer Marincola FM, Wang E: Immunologic signatures of rejection. 2010, New York, NY: Springer
195.
go back to reference Pos Z, Galon J: Predictors of favorable outcome in cancer. Immunologic signatures of rejection. Edited by: Marincola FM, Wang E. 2010, New York: Springer, 199-210. Pos Z, Galon J: Predictors of favorable outcome in cancer. Immunologic signatures of rejection. Edited by: Marincola FM, Wang E. 2010, New York: Springer, 199-210.
196.
go back to reference Bedognetti D: Signatures Associated with Acute Rejection: Allograft Rejection. In: Immunologic signatures of rejection. Edited by: Marincola FM, Wang E. 2010, New York: Springer, 305-345. Bedognetti D: Signatures Associated with Acute Rejection: Allograft Rejection. In: Immunologic signatures of rejection. Edited by: Marincola FM, Wang E. 2010, New York: Springer, 305-345.
197.
go back to reference Ascierto ML, De Giorgi V, Liu Q, Bedognetti D, Spivey T, Murtas D, Uccellini L, Ayotte BD, Stroncek DF, Chouchane L: An immunologic portrait of cancer. J Transl Med. 2011, Ascierto ML, De Giorgi V, Liu Q, Bedognetti D, Spivey T, Murtas D, Uccellini L, Ayotte BD, Stroncek DF, Chouchane L: An immunologic portrait of cancer. J Transl Med. 2011,
198.
go back to reference Castiello L, Sabatino M, Jin P, Clayberger C, Marincola FM, Krensky AM, Stroncek DF: Monocyte-derived DC maturation strategies and related pathways: a transcriptional view. Cancer Immunol Immunother. 2011, 60: 457-466.PubMedCentralPubMed Castiello L, Sabatino M, Jin P, Clayberger C, Marincola FM, Krensky AM, Stroncek DF: Monocyte-derived DC maturation strategies and related pathways: a transcriptional view. Cancer Immunol Immunother. 2011, 60: 457-466.PubMedCentralPubMed
Metadata
Title
Gene expression profiling in acute allograft rejection: challenging the immunologic constant of rejection hypothesis
Authors
Tara L Spivey
Lorenzo Uccellini
Maria Libera Ascierto
Gabriele Zoppoli
Valeria De Giorgi
Lucia Gemma Delogu
Alyson M Engle
Jaime M Thomas
Ena Wang
Francesco M Marincola
Davide Bedognetti
Publication date
01-12-2011
Publisher
BioMed Central
Published in
Journal of Translational Medicine / Issue 1/2011
Electronic ISSN: 1479-5876
DOI
https://doi.org/10.1186/1479-5876-9-174

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