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Published in: BMC Infectious Diseases 1/2020

Open Access 01-12-2020 | Imipenem | Case report

Pulmonary disease caused by a newly identified mycobacterium: Mycolicibacterium toneyamachuris: a case report

Authors: Tomoki Kuge, Kiyoharu Fukushima, Yuki Matsumoto, Yuko Abe, Eri Akiba, Kako Haduki, Haruko Saito, Tadayoshi Nitta, Akira Kawano, Takahiro Kawasaki, Takanori Matsuki, Hiroyuki Kagawa, Daisuke Motooka, Kazuyuki Tsujino, Mari Miki, Keisuke Miki, Seigo Kitada, Shota Nakamura, Tetsuya Iida, Hiroshi Kida

Published in: BMC Infectious Diseases | Issue 1/2020

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Abstract

Background

Non-tuberculous mycobacterial pulmonary disease (NTM-PD) is becoming a significant health burden. Recent advances in analysis techniques have allowed the accurate identification of previously unknown NTM species. Here, we report a case of NTM-PD caused by a newly identified mycobacteria in an immunocompetent patient.

Case presentation

A 44-year-old woman was referred to our hospital due to the frequent aggravation of her chronic respiratory symptoms, with NTM-PD-compatible computed tomography findings. Unidentified mycobacterium was repeatedly isolated from respiratory specimens and we diagnosed her as NTM-PD of unidentified mycobacterium. Subsequent whole-genome analysis revealed that the unidentified mycobacterium was a novel mycobacterium genetically close to Mycolicibacterium mucogenicum. We started combination therapy with clarithromycin, moxifloxacin, amikacin, and imipenem/cilastatin, referring to drug sensitivity test results and observed its effect on M. mucogenicum infection. Her symptoms and radiological findings improved significantly.

Conclusion

We report a case of NTM-PD caused by a newly identified mycobacteria, Mycolicibacterium toneyamachuris, genetically close to M. mucogenicum. This pathogenic mycobacterium showed different characteristics from M. mucogenicum about clinical presentation and drug sensitivity. The clinical application of genomic sequencing will advance the identification and classification of pathogenic NTM species, and enhance our understanding of mycobacterial diseases.
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Literature
1.
go back to reference Daley CL, Iaccarino JM, Lange C, Cambau E, Wallace RJ, Andrejak C, et al. Treatment of Nontuberculous mycobacterial pulmonary disease: an official ATS/ERS/ESCMID/IDSA clinical practice guideline: executive summary. Clin Infect Dis. 2020. https://doi.org/10.1093/cid/ciaa241. Daley CL, Iaccarino JM, Lange C, Cambau E, Wallace RJ, Andrejak C, et al. Treatment of Nontuberculous mycobacterial pulmonary disease: an official ATS/ERS/ESCMID/IDSA clinical practice guideline: executive summary. Clin Infect Dis. 2020. https://​doi.​org/​10.​1093/​cid/​ciaa241.
2.
go back to reference Yoshida M, Fukano H, Ogura Y, Kazumi Y, Mitarai S, Hayashi T, et al. Complete genome sequence of mycobacterium shigaense. Genome Announc. 2018;6:e00552–18.PubMedPubMedCentral Yoshida M, Fukano H, Ogura Y, Kazumi Y, Mitarai S, Hayashi T, et al. Complete genome sequence of mycobacterium shigaense. Genome Announc. 2018;6:e00552–18.PubMedPubMedCentral
3.
go back to reference Fukano H, Hiranuma O, Matsui Y, Tanaka S, Hoshino Y. The first case of chronic pulmonary mycobacterium shigaense infection in an immunocompetent patient. New Microbes New Infect. 2020;33:100630.CrossRef Fukano H, Hiranuma O, Matsui Y, Tanaka S, Hoshino Y. The first case of chronic pulmonary mycobacterium shigaense infection in an immunocompetent patient. New Microbes New Infect. 2020;33:100630.CrossRef
4.
go back to reference Saito H, Iwamoto T, Ohkusu K, Otsuka Y, Akiyama Y, Sato S, et al. Mycobacterium shinjukuense sp. nov., a slowly growing, non-chromogenic species isolated from human clinical specimens. Int J Syst Evol Microbiol. 2011;61:1927–32.CrossRef Saito H, Iwamoto T, Ohkusu K, Otsuka Y, Akiyama Y, Sato S, et al. Mycobacterium shinjukuense sp. nov., a slowly growing, non-chromogenic species isolated from human clinical specimens. Int J Syst Evol Microbiol. 2011;61:1927–32.CrossRef
5.
go back to reference Takeda K, Ohshima N, Nagai H, Sato R, Ando T, Kusaka K, et al. Six cases of pulmonary mycobacterium shinjukuense infection at a single hospital. Intern Med. 2016;55:787–91.CrossRef Takeda K, Ohshima N, Nagai H, Sato R, Ando T, Kusaka K, et al. Six cases of pulmonary mycobacterium shinjukuense infection at a single hospital. Intern Med. 2016;55:787–91.CrossRef
6.
go back to reference Adekambi T. MycobacteriuM. Mucogenicum group infections: a review. Clin Microbiol Infect. 2009;15:911–8.CrossRef Adekambi T. MycobacteriuM. Mucogenicum group infections: a review. Clin Microbiol Infect. 2009;15:911–8.CrossRef
7.
go back to reference Griffith DE, Aksamit T, Brown-Elliott BA, Catanzaro A, Daley C, Gordin F, et al. An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med. 2007;175:367–416.CrossRef Griffith DE, Aksamit T, Brown-Elliott BA, Catanzaro A, Daley C, Gordin F, et al. An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med. 2007;175:367–416.CrossRef
8.
go back to reference Matsumoto Y, Kinjo T, Motooka D, Nabeya D, Jung N, Uechi K, et al. Comprehensive subspecies identification of 175 nontuberculous mycobacteria species based on 7547 genomic profiles. Emerg Microbes Infect. 2019;8:1043–53.CrossRef Matsumoto Y, Kinjo T, Motooka D, Nabeya D, Jung N, Uechi K, et al. Comprehensive subspecies identification of 175 nontuberculous mycobacteria species based on 7547 genomic profiles. Emerg Microbes Infect. 2019;8:1043–53.CrossRef
9.
go back to reference Gupta RS, Lo B, Son J. Phylogenomics and comparative genomic studies robustly support division of the genus mycobacterium into an emended genus mycobacterium and four novel genera. Front Microbiol. 2018;9:67.CrossRef Gupta RS, Lo B, Son J. Phylogenomics and comparative genomic studies robustly support division of the genus mycobacterium into an emended genus mycobacterium and four novel genera. Front Microbiol. 2018;9:67.CrossRef
10.
go back to reference Behra PRK, Pettersson BMF, Das S, Dasgupta S, Kirsebom LA. Comparative genomics of mycobacterium mucogenicum and mycobacterium neoaurum clade members emphasizing tRNA and non-coding RNA. BMC Evol Biol. 2019;19:124.CrossRef Behra PRK, Pettersson BMF, Das S, Dasgupta S, Kirsebom LA. Comparative genomics of mycobacterium mucogenicum and mycobacterium neoaurum clade members emphasizing tRNA and non-coding RNA. BMC Evol Biol. 2019;19:124.CrossRef
11.
go back to reference Brode SK, Campitelli MA, Kwong JC, Lu H, Marchand-Austin A, Gershon AS, et al. The risk of mycobacterial infections associated with inhaled corticosteroid use. Eur Respir J. 2017;50:1700037.CrossRef Brode SK, Campitelli MA, Kwong JC, Lu H, Marchand-Austin A, Gershon AS, et al. The risk of mycobacterial infections associated with inhaled corticosteroid use. Eur Respir J. 2017;50:1700037.CrossRef
12.
go back to reference Fedrizzi T, Meehan CJ, Grottola A, Giacobazzi E, Fregni Serpini G, Tagliazucchi S, et al. Genomic characterization of Nontuberculous mycobacteria. Sci Rep. 2017;7:45258.CrossRef Fedrizzi T, Meehan CJ, Grottola A, Giacobazzi E, Fregni Serpini G, Tagliazucchi S, et al. Genomic characterization of Nontuberculous mycobacteria. Sci Rep. 2017;7:45258.CrossRef
13.
go back to reference Philley JV, Griffith DE. Medical Management of Pulmonary Nontuberculous Mycobacterial Disease. Thorac Surg Clin. 2019;29:65–76.CrossRef Philley JV, Griffith DE. Medical Management of Pulmonary Nontuberculous Mycobacterial Disease. Thorac Surg Clin. 2019;29:65–76.CrossRef
14.
go back to reference Boyle DP, Zembower TR, Reddy S, Qi C. Comparison of clinical features, virulence, and relapse among Mycobacterium avium complex species. Am J Respir Crit Care Med. 2015;191:1310–7.CrossRef Boyle DP, Zembower TR, Reddy S, Qi C. Comparison of clinical features, virulence, and relapse among Mycobacterium avium complex species. Am J Respir Crit Care Med. 2015;191:1310–7.CrossRef
15.
go back to reference Kwak N, Dalcolmo MP, Daley CL, Eather G, Gayoso R, Hasegawa N, et al. Mycobacterium abscessus pulmonary disease: individual patient data meta-analysis. Eur Respir J. 2019;54:1801991.CrossRef Kwak N, Dalcolmo MP, Daley CL, Eather G, Gayoso R, Hasegawa N, et al. Mycobacterium abscessus pulmonary disease: individual patient data meta-analysis. Eur Respir J. 2019;54:1801991.CrossRef
Metadata
Title
Pulmonary disease caused by a newly identified mycobacterium: Mycolicibacterium toneyamachuris: a case report
Authors
Tomoki Kuge
Kiyoharu Fukushima
Yuki Matsumoto
Yuko Abe
Eri Akiba
Kako Haduki
Haruko Saito
Tadayoshi Nitta
Akira Kawano
Takahiro Kawasaki
Takanori Matsuki
Hiroyuki Kagawa
Daisuke Motooka
Kazuyuki Tsujino
Mari Miki
Keisuke Miki
Seigo Kitada
Shota Nakamura
Tetsuya Iida
Hiroshi Kida
Publication date
01-12-2020
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2020
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-020-05626-y

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