Skip to main content
Top
Published in: BMC Infectious Diseases 1/2019

Open Access 01-12-2019 | Isoniazid | Research article

Multicenter evaluation of TB-SPRINT 59-Plex Beamedex®: accuracy and cost analysis

Authors: Regina Bones Barcellos, Isabela Neves de Almeida, Elisangela Costa da Silva, Harrison Magdinier Gomes, Lida Jouca de Assis Figueredo, Maria Laura Halon, Elis Regina Dalla Costa, Ícaro Rodrigues dos Santos, Maria Cláudia Vater, Suely Alves, Wânia da Silva Carvalho, Philip Suffys, Christophe Sola, Silvana Spíndola de Miranda, Maria Lucia Rossetti, Afrânio Kritski

Published in: BMC Infectious Diseases | Issue 1/2019

Login to get access

Abstract

Background

Molecular tests can allow the rapid detection of tuberculosis (TB) and multidrug-resistant TB (MDR-TB). TB-SPRINT 59-Plex Beamedex® is a microbead-based assay developed for the simultaneous spoligotyping and detection of MDR-TB. The accuracy and cost evaluation of new assays and technologies are of great importance for their routine use in clinics and in research laboratories. The aim of this study was to evaluate the performance of TB-SPRINT at three laboratory research centers in Brazil and calculate its mean cost (MC) and activity-based costing (ABC).

Methods

TB-SPRINT data were compared with the phenotypic and genotypic profiles obtained using Bactec™ MGIT™ 960 system and Genotype® MTBDRplus, respectively.

Results

Compared with MGIT, the accuracies of TB-SPRINT for the detection of rifampicin and isoniazid resistance ranged from 81 to 92% and 91.3 to 93.9%, respectively. Compared with MTBDRplus, the accuracies of TB-SPRINT for rifampicin and isoniazid were 99 and 94.2%, respectively. Moreover, the MC and ABC of TB-SPRINT were USD 127.78 and USD 109.94, respectively.

Conclusion

TB-SPRINT showed good results for isoniazid and rifampicin resistance detection, but still needs improvement to achieve In Vitro Diagnostics standards.
Literature
1.
go back to reference WHO. WHO Global Tuberculosis Report 2018. 2018. WHO. WHO Global Tuberculosis Report 2018. 2018.
2.
go back to reference WHO. Molecular Line Probe Assays for Rapid Screening of Patients At Risk of Multidrug-Resistant Tuberculosis Policy Statement Molecular Line Probe Assays for Rapid Screening of. 2008. WHO. Molecular Line Probe Assays for Rapid Screening of Patients At Risk of Multidrug-Resistant Tuberculosis Policy Statement Molecular Line Probe Assays for Rapid Screening of. 2008.
3.
go back to reference Rabodoarivelo M, Brandao A, Cergole Novella M, Bombonatte AC, Imperiale B, Rakotosamimanana N, et al. Detection of multidrug-resistant tuberculosis from stored DNA Samples: A multicenter study. Int J Mycobacteriol. 2018;7:40–4.CrossRef Rabodoarivelo M, Brandao A, Cergole Novella M, Bombonatte AC, Imperiale B, Rakotosamimanana N, et al. Detection of multidrug-resistant tuberculosis from stored DNA Samples: A multicenter study. Int J Mycobacteriol. 2018;7:40–4.CrossRef
4.
go back to reference Secretaria de Vigilância em Saúde − Ministério da Saúde. Boletim Epidemiológico Perspectivas brasileiras para o fim da tuberculose como problema de saúde pública. 2016. Secretaria de Vigilância em Saúde − Ministério da Saúde. Boletim Epidemiológico Perspectivas brasileiras para o fim da tuberculose como problema de saúde pública. 2016.
5.
go back to reference Huang H, Zhang Y, Li S, Wang J, Chen J, Pan Z, et al. Rifampicin resistance and multidrug-resistant tuberculosis detection using Xpert MTB/RIF in Wuhan, China: a retrospective study. Microb Drug Resist. 2017;24:675–9.CrossRef Huang H, Zhang Y, Li S, Wang J, Chen J, Pan Z, et al. Rifampicin resistance and multidrug-resistant tuberculosis detection using Xpert MTB/RIF in Wuhan, China: a retrospective study. Microb Drug Resist. 2017;24:675–9.CrossRef
6.
go back to reference Groessl EJ, Ganiats TG, Hillery N, Trollip A, Jackson RL, Catanzaro DG, et al. Cost analysis of rapid diagnostics for drug-resistant tuberculosis. BMC Infect Dis. 2018;18:112.CrossRef Groessl EJ, Ganiats TG, Hillery N, Trollip A, Jackson RL, Catanzaro DG, et al. Cost analysis of rapid diagnostics for drug-resistant tuberculosis. BMC Infect Dis. 2018;18:112.CrossRef
7.
go back to reference Pantoja A, Fitzpatrick C, Vassall A, Weyer K, Floyd K. Xpert MTB/RIF for diagnosis of tuberculosis and drug-resistant tuberculosis: a cost and affordability analysis. Eur Respir J. 2013;42:708–20.CrossRef Pantoja A, Fitzpatrick C, Vassall A, Weyer K, Floyd K. Xpert MTB/RIF for diagnosis of tuberculosis and drug-resistant tuberculosis: a cost and affordability analysis. Eur Respir J. 2013;42:708–20.CrossRef
8.
go back to reference Dowdy DW, Van’T Hoog A, Shah M, Cobelens F. Cost-effectiveness of rapid susceptibility testing against second-line drugs for tuberculosis. Int J Tuberc Lung Dis. 2014;18:647–54.CrossRef Dowdy DW, Van’T Hoog A, Shah M, Cobelens F. Cost-effectiveness of rapid susceptibility testing against second-line drugs for tuberculosis. Int J Tuberc Lung Dis. 2014;18:647–54.CrossRef
9.
go back to reference Dantas NGT, Suffys PN, Carvalho WS, Gomes HM, de Almeida IN, Figueiredo LJA, et al. Correlation between the BACTEC MGIT 960 culture system with genotype MTBDRplus and TB-SPRINT in multidrug resistant mycobacterium tuberculosis clinical isolates from Brazil. Mem Inst Oswaldo Cruz. 2017;112:769–74.CrossRef Dantas NGT, Suffys PN, Carvalho WS, Gomes HM, de Almeida IN, Figueiredo LJA, et al. Correlation between the BACTEC MGIT 960 culture system with genotype MTBDRplus and TB-SPRINT in multidrug resistant mycobacterium tuberculosis clinical isolates from Brazil. Mem Inst Oswaldo Cruz. 2017;112:769–74.CrossRef
10.
go back to reference Molina-Moya B, Gomgnimbou MK, Lafoz C, Lacoma A, Prat C, Refrégier G, et al. Molecular characterization of mycobacterium tuberculosis strains with TB-SPRINT. Am J Trop Med Hyg. 2017;97:806–9.CrossRef Molina-Moya B, Gomgnimbou MK, Lafoz C, Lacoma A, Prat C, Refrégier G, et al. Molecular characterization of mycobacterium tuberculosis strains with TB-SPRINT. Am J Trop Med Hyg. 2017;97:806–9.CrossRef
11.
go back to reference Kiréopori Gomgnimbou M, Hernandez-Neuta I, Panaiotov S, Bachiyska E, Carlos Palomino J, Martin A, et al. Tuberculosis-Spoligo-rifampin-isoniazid typing: an all-in-one assay technique for surveillance and control of multidrug-resistant tuberculosis on Luminex devices. J Clin Microbiol. 2013;51:3527–4.CrossRef Kiréopori Gomgnimbou M, Hernandez-Neuta I, Panaiotov S, Bachiyska E, Carlos Palomino J, Martin A, et al. Tuberculosis-Spoligo-rifampin-isoniazid typing: an all-in-one assay technique for surveillance and control of multidrug-resistant tuberculosis on Luminex devices. J Clin Microbiol. 2013;51:3527–4.CrossRef
12.
go back to reference Siddiqi SH, Rüsch-Gerdes S. For BACTECTM MGIT 960TM TB System (Also applicable for Manual MGIT). 2006; July. Siddiqi SH, Rüsch-Gerdes S. For BACTECTM MGIT 960TM TB System (Also applicable for Manual MGIT). 2006; July.
13.
go back to reference Hain Lifescience. Geno Type MTBDR plus ver 2.0 Manual; 2012. p. 1–14. Hain Lifescience. Geno Type MTBDR plus ver 2.0 Manual; 2012. p. 1–14.
14.
go back to reference Dantas NGT, Suffys PN, Carvalho WS, Gomes HM, de Almeida IN, de Assis LJ, et al. Genetic diversity and molecular epidemiology of multidrug-resistant mycobacterium tuberculosis in Minas Gerais State, Brazil. BMC Infect Dis. 2015;15:306.CrossRef Dantas NGT, Suffys PN, Carvalho WS, Gomes HM, de Almeida IN, de Assis LJ, et al. Genetic diversity and molecular epidemiology of multidrug-resistant mycobacterium tuberculosis in Minas Gerais State, Brazil. BMC Infect Dis. 2015;15:306.CrossRef
15.
go back to reference Beamedex. User Manual TB-SPRINT for Luminex 200 or Bioplex 200 or MagPix (59-Plex); 2015. p. 1–10. Beamedex. User Manual TB-SPRINT for Luminex 200 or Bioplex 200 or MagPix (59-Plex); 2015. p. 1–10.
16.
go back to reference Ferreira Junior SLM, Costa ERD, dos Santos PG, Gomes HM, Silva MSN, Esteves LS, et al. In house reverse membrane hybridisation assay versus genotype MTBDRplus and their performance to detect mutations in the genes rpoB, katG and inhA. Mem Inst Oswaldo Cruz. 2014;109:307–14.CrossRef Ferreira Junior SLM, Costa ERD, dos Santos PG, Gomes HM, Silva MSN, Esteves LS, et al. In house reverse membrane hybridisation assay versus genotype MTBDRplus and their performance to detect mutations in the genes rpoB, katG and inhA. Mem Inst Oswaldo Cruz. 2014;109:307–14.CrossRef
17.
go back to reference de Almeida IN, Figueredo LJA, Soares VM, Vater MC, Alves S, Carvalho WS, et al. Evaluation of the mean cost and activity based cost in the diagnosis of pulmonary tuberculosis in the laboratory routine of a high-complexity hospital in Brazil. Front Microbiol. 2017;8:249.PubMedPubMedCentral de Almeida IN, Figueredo LJA, Soares VM, Vater MC, Alves S, Carvalho WS, et al. Evaluation of the mean cost and activity based cost in the diagnosis of pulmonary tuberculosis in the laboratory routine of a high-complexity hospital in Brazil. Front Microbiol. 2017;8:249.PubMedPubMedCentral
18.
go back to reference Brasil. Programa Nacional de Gestão de Custos. Brasília: Manual Técnico de Custos-Conceitos e Metodologias; 2006. Brasil. Programa Nacional de Gestão de Custos. Brasília: Manual Técnico de Custos-Conceitos e Metodologias; 2006.
19.
go back to reference De Abreu Maschmann R, Spies FS, De Souza Nunes L, Ribeiro AW, Machado TRM, Zaha A, et al. Performance of the genotype MTBDRplus assay directly on sputum specimens from Brazilian patients with tuberculosis treatment failure or relapse. J Clin Microbiol. 2013;51:1606–8.CrossRef De Abreu Maschmann R, Spies FS, De Souza Nunes L, Ribeiro AW, Machado TRM, Zaha A, et al. Performance of the genotype MTBDRplus assay directly on sputum specimens from Brazilian patients with tuberculosis treatment failure or relapse. J Clin Microbiol. 2013;51:1606–8.CrossRef
20.
go back to reference Feliciano CS, Nascimento MMP, Anselmo LMP, Pocente RHC, Bellissimo-Rodrigues F, Bollela VR. Role of a genotype MTBDRplus line probe assay in early detection of multidrug-resistant tuberculosis at a Brazilian reference center. Brazilian J Med Biol Res. 2015;48:759–64.CrossRef Feliciano CS, Nascimento MMP, Anselmo LMP, Pocente RHC, Bellissimo-Rodrigues F, Bollela VR. Role of a genotype MTBDRplus line probe assay in early detection of multidrug-resistant tuberculosis at a Brazilian reference center. Brazilian J Med Biol Res. 2015;48:759–64.CrossRef
21.
go back to reference Nikam C, Patel R, Sadani M, Ajbani K, Kazi M, Soman R, et al. Redefining MTBDRplus test results: what do indeterminate results actually mean? Int J Tuberc Lung Dis. 2016;20:154–9.CrossRef Nikam C, Patel R, Sadani M, Ajbani K, Kazi M, Soman R, et al. Redefining MTBDRplus test results: what do indeterminate results actually mean? Int J Tuberc Lung Dis. 2016;20:154–9.CrossRef
22.
go back to reference Dorman SE, Chihot VN, Lewis JJ, Van der Meulen M, Mathem B, Beylis N, et al. Genotype MTBDRplus for direct detection of mycobacterium tuberculosis and drug resistance in strains from gold miners in South Africa. J Clin Microbiol. 2012;50:1189–94.CrossRef Dorman SE, Chihot VN, Lewis JJ, Van der Meulen M, Mathem B, Beylis N, et al. Genotype MTBDRplus for direct detection of mycobacterium tuberculosis and drug resistance in strains from gold miners in South Africa. J Clin Microbiol. 2012;50:1189–94.CrossRef
23.
go back to reference Paramasivan CN, Raizada N. Line probe assay: a look at non-interpretable results. Int J Tuberc Lung Dis. 2016;2:146.CrossRef Paramasivan CN, Raizada N. Line probe assay: a look at non-interpretable results. Int J Tuberc Lung Dis. 2016;2:146.CrossRef
24.
go back to reference Georghiou SB, Seifert M, Catanzaro D, Garfein RS, Valafar F, Crudu V, et al. Frequency and distribution of tuberculosis resistance-associated mutations between Mumbai, Moldova, and eastern cape. Antimicrob Agents Chemother. 2016;60:3994–04.CrossRef Georghiou SB, Seifert M, Catanzaro D, Garfein RS, Valafar F, Crudu V, et al. Frequency and distribution of tuberculosis resistance-associated mutations between Mumbai, Moldova, and eastern cape. Antimicrob Agents Chemother. 2016;60:3994–04.CrossRef
25.
go back to reference Soares VM, Almeida IN, Vater MC, Figueiredo LJA, Manso CGG, Alves S et al. GenotypeMTBDR®plus e XPERT MTB/RIF® no diagnóstico da tuberculose e tuberculose resistente: Análise de custo em um Hospital de Referência Terciária no Brasil. 2016. Soares VM, Almeida IN, Vater MC, Figueiredo LJA, Manso CGG, Alves S et al. GenotypeMTBDR®plus e XPERT MTB/RIF® no diagnóstico da tuberculose e tuberculose resistente: Análise de custo em um Hospital de Referência Terciária no Brasil. 2016.
26.
go back to reference BIO-RAD. Bio-Plex ProTM Assays. In: Cytokine, Chemokine, and Growth Factors: Instruction Manual; 2014. BIO-RAD. Bio-Plex ProTM Assays. In: Cytokine, Chemokine, and Growth Factors: Instruction Manual; 2014.
27.
go back to reference Operario DJ, Koeppel AF, Turner SD, Bao Y, Pholwat S, Banu S, et al. Prevalence and extent of heteroresistance by next generation sequencing of multidrug-resistant tuberculosis. PLoS One. 2017;12:e0176522.CrossRef Operario DJ, Koeppel AF, Turner SD, Bao Y, Pholwat S, Banu S, et al. Prevalence and extent of heteroresistance by next generation sequencing of multidrug-resistant tuberculosis. PLoS One. 2017;12:e0176522.CrossRef
Metadata
Title
Multicenter evaluation of TB-SPRINT 59-Plex Beamedex®: accuracy and cost analysis
Authors
Regina Bones Barcellos
Isabela Neves de Almeida
Elisangela Costa da Silva
Harrison Magdinier Gomes
Lida Jouca de Assis Figueredo
Maria Laura Halon
Elis Regina Dalla Costa
Ícaro Rodrigues dos Santos
Maria Cláudia Vater
Suely Alves
Wânia da Silva Carvalho
Philip Suffys
Christophe Sola
Silvana Spíndola de Miranda
Maria Lucia Rossetti
Afrânio Kritski
Publication date
01-12-2019
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2019
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-019-4646-3

Other articles of this Issue 1/2019

BMC Infectious Diseases 1/2019 Go to the issue
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discuss last year's major advances in heart failure and cardiomyopathies.