Skip to main content
Top
Published in: BMC Infectious Diseases 1/2017

Open Access 01-12-2017 | Research article

Outbreak of caliciviruses in the Singapore military, 2015

Authors: Freddy Jun Xian Neo, Jimmy Jin Phang Loh, Peijun Ting, Wei Xin Yeo, Christine Qiu Han Gao, Vernon Jian Ming Lee, Boon Huan Tan, Ching Ging Ng

Published in: BMC Infectious Diseases | Issue 1/2017

Login to get access

Abstract

Background

From 31 August to 9 September 2015, a total of 150 military personnel at a military institution in Singapore were infected with acute gastroenteritis (AGE) with an attack rate of approximately 3%. This study aimed to determine the epidemiology of the outbreak, investigate its origins, and discuss measures to prevent future occurrences.

Methods

After the AGE outbreak was declared on 31 August 2015, symptom surveys, hygiene inspections, and the testing of water, food, and stool samples were initiated. We collected 86 stool samples from AGE cases and 58 samples from food-handlers during the course of the outbreak and these stool samples were tested for 8 bacterial pathogens and 2 viral pathogens (i.e., norovirus and sapovirus).

Results

We detected Sapovirus (SaV), group I Norovirus (NoV GI) and group II Norovirus (NoV GII) from the stool samples of AGE cases. Further sequence analyses showed that the AGE outbreak in August was caused mainly by three rarely reported calicivirus novel genotypes: NoV GI.7, NoV GII.17 and SaV GII.3. Control measures implemented focused on the escalation of personal and environmental hygiene, which included the separation of affected and unaffected soldiers, enforcement of rigorous hand-washing and hygiene, raising awareness of food and water safety, and disinfection of communal areas with bleach.

Conclusions

This study identified both NoV and SaV as the causative agents for an AGE outbreak at a Singapore military camp in August 2015. This study is also the first to report SaV as one of the main causative agents, highlighting the importance of caliciviruses as causative agents of AGE outbreaks in the Singapore military. As there are no commercially available vaccines against caliciviruses, strict personal hygiene and proper disinfection of environmental surfaces remain crucial to prevent calicivirus outbreak and transmission.
Literature
1.
go back to reference Green KY. Caliciviridae: the noroviruses. Fields Virol. 2007;5:949–79. Green KY. Caliciviridae: the noroviruses. Fields Virol. 2007;5:949–79.
2.
go back to reference Farkas T, Zhong WM, Jing Y, Huang PW, Espinosa SM, Martinez N, Morrow AL, Ruiz-Palacios GM, Pickering LK, Jiang X. Genetic diversity among sapoviruses. Arch Virol. 2004;149(7):1309–23.CrossRefPubMed Farkas T, Zhong WM, Jing Y, Huang PW, Espinosa SM, Martinez N, Morrow AL, Ruiz-Palacios GM, Pickering LK, Jiang X. Genetic diversity among sapoviruses. Arch Virol. 2004;149(7):1309–23.CrossRefPubMed
4.
5.
go back to reference Siebenga JJ, Vennema H, Zheng DP, Vinje J, Lee BE, Pang XL, Ho EC, Lim W, Choudekar A, Broor S, et al. Norovirus illness is a global problem: emergence and spread of norovirus GII.4 variants, 2001-2007. J Infect Dis. 2009;200(5):802–12.CrossRefPubMed Siebenga JJ, Vennema H, Zheng DP, Vinje J, Lee BE, Pang XL, Ho EC, Lim W, Choudekar A, Broor S, et al. Norovirus illness is a global problem: emergence and spread of norovirus GII.4 variants, 2001-2007. J Infect Dis. 2009;200(5):802–12.CrossRefPubMed
6.
go back to reference Bull RA, Tu ET, McIver CJ, Rawlinson WD, White PA. Emergence of a new norovirus genotype II.4 variant associated with global outbreaks of gastroenteritis. J Clin Microbiol. 2006;44(2):327–33.CrossRefPubMedPubMedCentral Bull RA, Tu ET, McIver CJ, Rawlinson WD, White PA. Emergence of a new norovirus genotype II.4 variant associated with global outbreaks of gastroenteritis. J Clin Microbiol. 2006;44(2):327–33.CrossRefPubMedPubMedCentral
8.
go back to reference Patel MM, Hall AJ, Vinje J, Parashar UD. Noroviruses: a comprehensive review. J Clin Virol. 2009;44(1):1–8.CrossRefPubMed Patel MM, Hall AJ, Vinje J, Parashar UD. Noroviruses: a comprehensive review. J Clin Virol. 2009;44(1):1–8.CrossRefPubMed
9.
go back to reference Widdowson MA, Sulka A, Bulens SN, Beard RS, Chaves SS, Hammond R, Salehi ED, Swanson E, Totaro J, Woron R, et al. Norovirus and foodborne disease, United States, 1991-2000. Emerg Infect Dis. 2005;11(1):95–102.CrossRefPubMedPubMedCentral Widdowson MA, Sulka A, Bulens SN, Beard RS, Chaves SS, Hammond R, Salehi ED, Swanson E, Totaro J, Woron R, et al. Norovirus and foodborne disease, United States, 1991-2000. Emerg Infect Dis. 2005;11(1):95–102.CrossRefPubMedPubMedCentral
10.
go back to reference Ho ZJ, Vithia G, Ng CG, Maurer-Stroh S, Tan CM, Loh J, Lin TP, Lee JM. Emergence of norovirus GI.2 outbreaks in military camps in Singapore. Int J Infect Dis. 2015;31:23–30.CrossRefPubMed Ho ZJ, Vithia G, Ng CG, Maurer-Stroh S, Tan CM, Loh J, Lin TP, Lee JM. Emergence of norovirus GI.2 outbreaks in military camps in Singapore. Int J Infect Dis. 2015;31:23–30.CrossRefPubMed
11.
go back to reference Ike AC, Hartelt K, Oehme RM, Brockmann SO. Detection and characterization of sapoviruses in outbreaks of gastroenteritis in southwest Germany. J Clin Virol. 2008;43(1):37–41.CrossRefPubMed Ike AC, Hartelt K, Oehme RM, Brockmann SO. Detection and characterization of sapoviruses in outbreaks of gastroenteritis in southwest Germany. J Clin Virol. 2008;43(1):37–41.CrossRefPubMed
12.
go back to reference Phan TG, Trinh QD, Yagyu F, Sugita K, Okitsu S, Muller WE, Ushijima H. Outbreak of sapovirus infection among infants and children with acute gastroenteritis in Osaka City, Japan during 2004-2005. J Med Virol. 2006;78(6):839–46.CrossRefPubMed Phan TG, Trinh QD, Yagyu F, Sugita K, Okitsu S, Muller WE, Ushijima H. Outbreak of sapovirus infection among infants and children with acute gastroenteritis in Osaka City, Japan during 2004-2005. J Med Virol. 2006;78(6):839–46.CrossRefPubMed
13.
go back to reference Hansman GS, Takeda N, Katayama K, Tu ET, McIver CJ, Rawlinson WD, White PA. Genetic diversity of Sapovirus in children, Australia. Emerg Infect Dis. 2006;12(1):141–3.CrossRefPubMedPubMedCentral Hansman GS, Takeda N, Katayama K, Tu ET, McIver CJ, Rawlinson WD, White PA. Genetic diversity of Sapovirus in children, Australia. Emerg Infect Dis. 2006;12(1):141–3.CrossRefPubMedPubMedCentral
14.
go back to reference Pang XL, Lee BE, Tyrrell GJ, Preiksaitis JK. Epidemiology and genotype analysis of sapovirus associated with gastroenteritis outbreaks in Alberta, Canada: 2004-2007. J Infect Dis. 2009;199(4):547–51.CrossRefPubMed Pang XL, Lee BE, Tyrrell GJ, Preiksaitis JK. Epidemiology and genotype analysis of sapovirus associated with gastroenteritis outbreaks in Alberta, Canada: 2004-2007. J Infect Dis. 2009;199(4):547–51.CrossRefPubMed
15.
go back to reference Svraka S, Vennema H, van der Veer B, Hedlund KO, Thorhagen M, Siebenga J, Duizer E, Koopmans M. Epidemiology and genotype analysis of emerging sapovirus-associated infections across Europe. J Clin Microbiol. 2010;48(6):2191–8.CrossRefPubMedPubMedCentral Svraka S, Vennema H, van der Veer B, Hedlund KO, Thorhagen M, Siebenga J, Duizer E, Koopmans M. Epidemiology and genotype analysis of emerging sapovirus-associated infections across Europe. J Clin Microbiol. 2010;48(6):2191–8.CrossRefPubMedPubMedCentral
16.
go back to reference Wang G, Shen Z, Qian F, Li Y, Yuan Z, Zhang J. Genetic diversity of sapovirus in non-hospitalized adults with sporadic cases of acute gastroenteritis in shanghai, China. J Clin Virol. 2014;59(4):250–4.CrossRefPubMed Wang G, Shen Z, Qian F, Li Y, Yuan Z, Zhang J. Genetic diversity of sapovirus in non-hospitalized adults with sporadic cases of acute gastroenteritis in shanghai, China. J Clin Virol. 2014;59(4):250–4.CrossRefPubMed
17.
go back to reference Lopes-Joao A, Costa I, Mesquita JR, Oleastro M, Penha-Goncalves C, Nascimento MS. Multiple enteropathogenic viruses in a gastroenteritis outbreak in a military exercise of the Portuguese Army. J Clin Virol. 2015;68:73–5.CrossRefPubMed Lopes-Joao A, Costa I, Mesquita JR, Oleastro M, Penha-Goncalves C, Nascimento MS. Multiple enteropathogenic viruses in a gastroenteritis outbreak in a military exercise of the Portuguese Army. J Clin Virol. 2015;68:73–5.CrossRefPubMed
18.
go back to reference Loh JP, Liu YC, Chew SW, Ong ES, Fam JM, Ng YY, Taylor MB, Ooi EE. The rapid identification of Clostridium Perfringens as the possible aetiology of a diarrhoeal outbreak using PCR. Epidemiol Infect. 2008;136(8):1142–6.CrossRefPubMed Loh JP, Liu YC, Chew SW, Ong ES, Fam JM, Ng YY, Taylor MB, Ooi EE. The rapid identification of Clostridium Perfringens as the possible aetiology of a diarrhoeal outbreak using PCR. Epidemiol Infect. 2008;136(8):1142–6.CrossRefPubMed
19.
go back to reference Jothikumar N, Lowther JA, Henshilwood K, Lees DN, Hill VR, Vinje J. Rapid and sensitive detection of noroviruses by using TaqMan-based one-step reverse transcription-PCR assays and application to naturally contaminated shellfish samples. Appl Environ Microbiol. 2005;71(4):1870–5.CrossRefPubMedPubMedCentral Jothikumar N, Lowther JA, Henshilwood K, Lees DN, Hill VR, Vinje J. Rapid and sensitive detection of noroviruses by using TaqMan-based one-step reverse transcription-PCR assays and application to naturally contaminated shellfish samples. Appl Environ Microbiol. 2005;71(4):1870–5.CrossRefPubMedPubMedCentral
20.
go back to reference van Maarseveen NM, Wessels E, de Brouwer CS, Vossen AC, Claas EC. Diagnosis of viral gastroenteritis by simultaneous detection of adenovirus group F, Astrovirus, rotavirus group a, Norovirus genogroups I and II, and Sapovirus in two internally controlled multiplex real-time PCR assays. J Clin Virol. 2010;49(3):205–10.CrossRefPubMed van Maarseveen NM, Wessels E, de Brouwer CS, Vossen AC, Claas EC. Diagnosis of viral gastroenteritis by simultaneous detection of adenovirus group F, Astrovirus, rotavirus group a, Norovirus genogroups I and II, and Sapovirus in two internally controlled multiplex real-time PCR assays. J Clin Virol. 2010;49(3):205–10.CrossRefPubMed
21.
go back to reference Kojima S, Kageyama T, Fukushi S, Hoshino FB, Shinohara M, Uchida K, Natori K, Takeda N, Katayama K. Genogroup-specific PCR primers for detection of Norwalk-like viruses. J Virol Methods. 2002;100(1-2):107–14.CrossRefPubMed Kojima S, Kageyama T, Fukushi S, Hoshino FB, Shinohara M, Uchida K, Natori K, Takeda N, Katayama K. Genogroup-specific PCR primers for detection of Norwalk-like viruses. J Virol Methods. 2002;100(1-2):107–14.CrossRefPubMed
22.
go back to reference Hansman GS, Oka T, Katayama K, Takeda N. Human sapoviruses: genetic diversity, recombination, and classification. Rev Med Virol. 2007;17(2):133–41.CrossRefPubMed Hansman GS, Oka T, Katayama K, Takeda N. Human sapoviruses: genetic diversity, recombination, and classification. Rev Med Virol. 2007;17(2):133–41.CrossRefPubMed
23.
go back to reference Wadl M, Scherer K, Nielsen S, Diedrich S, Ellerbroek L, Frank C, Gatzer R, Hoehne M, Johne R, Klein G, et al. Food-borne norovirus-outbreak at a military base, Germany, 2009. BMC Infect Dis. 2010;10:30.CrossRefPubMedPubMedCentral Wadl M, Scherer K, Nielsen S, Diedrich S, Ellerbroek L, Frank C, Gatzer R, Hoehne M, Johne R, Klein G, et al. Food-borne norovirus-outbreak at a military base, Germany, 2009. BMC Infect Dis. 2010;10:30.CrossRefPubMedPubMedCentral
24.
go back to reference Ueki Y, Sano D, Watanabe T, Akiyama K, Omura T. Norovirus pathway in water environment estimated by genetic analysis of strains from patients of gastroenteritis, sewage, treated wastewater, river water and oysters. Water Res. 2005;39(18):4271–80.CrossRefPubMed Ueki Y, Sano D, Watanabe T, Akiyama K, Omura T. Norovirus pathway in water environment estimated by genetic analysis of strains from patients of gastroenteritis, sewage, treated wastewater, river water and oysters. Water Res. 2005;39(18):4271–80.CrossRefPubMed
25.
go back to reference Hasing ME, Lee BE, Preiksaitis JK, Tellier R, Honish L, Senthilselvan A, Pang XL. Emergence of a new norovirus GII.4 variant and changes in the historical biennial pattern of norovirus outbreak activity in Alberta, Canada, from 2008 to 2013. J Clin Microbiol. 2013;51(7):2204–11.CrossRefPubMedPubMedCentral Hasing ME, Lee BE, Preiksaitis JK, Tellier R, Honish L, Senthilselvan A, Pang XL. Emergence of a new norovirus GII.4 variant and changes in the historical biennial pattern of norovirus outbreak activity in Alberta, Canada, from 2008 to 2013. J Clin Microbiol. 2013;51(7):2204–11.CrossRefPubMedPubMedCentral
26.
go back to reference Vega E, Barclay L, Gregoricus N, Shirley SH, Lee D, Vinje J. Genotypic and epidemiologic trends of norovirus outbreaks in the United States, 2009 to 2013. J Clin Microbiol. 2014;52(1):147–55.CrossRefPubMedPubMedCentral Vega E, Barclay L, Gregoricus N, Shirley SH, Lee D, Vinje J. Genotypic and epidemiologic trends of norovirus outbreaks in the United States, 2009 to 2013. J Clin Microbiol. 2014;52(1):147–55.CrossRefPubMedPubMedCentral
27.
go back to reference Chapman AS, Witkop CT, Escobar JD, Schlorman CA, DeMarcus LS, Marmer LM, Crum ME. Norovirus outbreak associated with person-to-person transmission, U.S. air Force academy, July 2011. MSMR. 2011;18(11):2–5.PubMed Chapman AS, Witkop CT, Escobar JD, Schlorman CA, DeMarcus LS, Marmer LM, Crum ME. Norovirus outbreak associated with person-to-person transmission, U.S. air Force academy, July 2011. MSMR. 2011;18(11):2–5.PubMed
28.
go back to reference Matsushima Y, Ishikawa M, Shimizu T, Komane A, Kasuo S, Shinohara M, Nagasawa K, Kimura H, Ryo A, Okabe N, et al. Genetic analyses of GII.17 norovirus strains in diarrheal disease outbreaks from December 2014 to march 2015 in Japan reveal a novel polymerase sequence and amino acid substitutions in the capsid region. Euro Surveill. 2015;20(26):2–7. Matsushima Y, Ishikawa M, Shimizu T, Komane A, Kasuo S, Shinohara M, Nagasawa K, Kimura H, Ryo A, Okabe N, et al. Genetic analyses of GII.17 norovirus strains in diarrheal disease outbreaks from December 2014 to march 2015 in Japan reveal a novel polymerase sequence and amino acid substitutions in the capsid region. Euro Surveill. 2015;20(26):2–7.
30.
go back to reference de Graaf M, van Beek J, Vennema H, Podkolzin AT, Hewitt J, Bucardo F, Templeton K, Mans J, Nordgren J, Reuter G, et al. Emergence of a novel GII.17 norovirus - end of the GII.4 era? Euro Surveill. 2015;20(26):8–15. de Graaf M, van Beek J, Vennema H, Podkolzin AT, Hewitt J, Bucardo F, Templeton K, Mans J, Nordgren J, Reuter G, et al. Emergence of a novel GII.17 norovirus - end of the GII.4 era? Euro Surveill. 2015;20(26):8–15.
31.
go back to reference Bernstein DI, Atmar RL, Lyon GM, Treanor JJ, Chen WH, Jiang X, Vinje J, Gregoricus N, Frenck RW Jr, Moe CL, et al. Norovirus vaccine against experimental human GII.4 virus illness: a challenge study in healthy adults. J Infect Dis. 2015;211(6):870–8.CrossRefPubMed Bernstein DI, Atmar RL, Lyon GM, Treanor JJ, Chen WH, Jiang X, Vinje J, Gregoricus N, Frenck RW Jr, Moe CL, et al. Norovirus vaccine against experimental human GII.4 virus illness: a challenge study in healthy adults. J Infect Dis. 2015;211(6):870–8.CrossRefPubMed
32.
go back to reference Xia M, Wei C, Wang L, Cao D, Meng XJ, Jiang X, Tan M. A trivalent vaccine candidate against hepatitis E virus, norovirus, and astrovirus. Vaccine. 2016;34(7):905–13.CrossRefPubMedPubMedCentral Xia M, Wei C, Wang L, Cao D, Meng XJ, Jiang X, Tan M. A trivalent vaccine candidate against hepatitis E virus, norovirus, and astrovirus. Vaccine. 2016;34(7):905–13.CrossRefPubMedPubMedCentral
Metadata
Title
Outbreak of caliciviruses in the Singapore military, 2015
Authors
Freddy Jun Xian Neo
Jimmy Jin Phang Loh
Peijun Ting
Wei Xin Yeo
Christine Qiu Han Gao
Vernon Jian Ming Lee
Boon Huan Tan
Ching Ging Ng
Publication date
01-12-2017
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2017
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-017-2821-y

Other articles of this Issue 1/2017

BMC Infectious Diseases 1/2017 Go to the issue