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Published in: BMC Infectious Diseases 1/2016

Open Access 01-12-2016 | Research article

Detection of West Nile virus in wild birds in Tana River and Garissa Counties, Kenya

Authors: Doris Nyamwaya, Virginia Wang’ondu, Joshua Amimo, George Michuki, Moses Ogugo, Enoch Ontiri, Rosemary Sang, Johanna Lindahl, Delia Grace, Bernard Bett

Published in: BMC Infectious Diseases | Issue 1/2016

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Abstract

Background

West Nile fever virus is a zoonotic arboviral infection maintained in a sylvatic cycle involving mosquito vectors and birds. It is one the arboviruses whose geographical range is expanding because of climate and land use changes that enhance the densities of mosquitoes and promote mosquito-bird-human interactions. We carried out a survey to determine the reservoirs of WNV among wild birds in Tana River and Garissa counties, Kenya.

Methods

Blood samples were obtained from 361 randomly trapped wild birds. Using real-time polymerase chain reaction (PCR), all samples were screened for WNV using gene specific primer sets amplifying a portion of the E region of the genome encoding the envelope protein.

Results

Sixty five (65) out of 361 birds screened tested positive for WNV on real-time PCR assay. Sequencing of the selected positive samples reveals that the isolated WNV were most closely related to strains isolated from China (2011). A regression analysis indicated that sampling location influenced the occurrence of WNV while species, age, weight and sex of the birds did not have any effect.

Conclusions

This study provides baseline information on the existing circulation of WNV in this region among wild bird reservoirs that could spill over to the human population and points to the need for implementation of surveillance programs to map the distribution of the virus among reservoirs. Awareness creation about West Nile fever in this region is important to improve its detection and management.
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Literature
1.
2.
go back to reference Mackenzie JS, Barrett ADT, Deubel V. The Japanese encephalitis serological group of flaviviruses: a brief introduction to the group. Curr Top Microbiol Immunol. 2002;267:1–10. Mackenzie JS, Barrett ADT, Deubel V. The Japanese encephalitis serological group of flaviviruses: a brief introduction to the group. Curr Top Microbiol Immunol. 2002;267:1–10.
3.
go back to reference Smithburn KC, Hughes TP, Burke a W, Paul JH, African A. A neurotropic virus isolated from the blood of a native of uganda. Am J Trop Med Hyg. 1940;s1-20:471–92. Smithburn KC, Hughes TP, Burke a W, Paul JH, African A. A neurotropic virus isolated from the blood of a native of uganda. Am J Trop Med Hyg. 1940;s1-20:471–92.
4.
go back to reference Anis E, Grotto I, Mendelson E, Bin H, Orshan L, Gandacu D, et al. West Nile fever in Israel: the reemergence of an endemic disease. J Infect Elsevier Ltd. 2014;68:170–5. Anis E, Grotto I, Mendelson E, Bin H, Orshan L, Gandacu D, et al. West Nile fever in Israel: the reemergence of an endemic disease. J Infect Elsevier Ltd. 2014;68:170–5.
5.
go back to reference Danis K, Papa a, Papanikolaou E, Dougas G, Terzaki I, Baka a, et al. Ongoing outbreak of West Nile virus infection in humans, Greece, July to August 2011. Euro Surveill. 2011;16:1–5. Danis K, Papa a, Papanikolaou E, Dougas G, Terzaki I, Baka a, et al. Ongoing outbreak of West Nile virus infection in humans, Greece, July to August 2011. Euro Surveill. 2011;16:1–5.
6.
go back to reference England TN, Nash D, Mostashari F, Fine A, Miller J, O’Leary D, et al. The outbreak of West Nile virus infection in the New York City area in 1999. N Engl J Med. 2001;344:1807–14.CrossRef England TN, Nash D, Mostashari F, Fine A, Miller J, O’Leary D, et al. The outbreak of West Nile virus infection in the New York City area in 1999. N Engl J Med. 2001;344:1807–14.CrossRef
7.
go back to reference Gould EA. Evolution of the Japanese encephalitis serocomplex viruses. Curr Top Microbiol Immunol. 2002;267:391–404. Gould EA. Evolution of the Japanese encephalitis serocomplex viruses. Curr Top Microbiol Immunol. 2002;267:391–404.
8.
go back to reference Mackenzie JS, Gubler DJ, Petersen LR. Emerging flaviviruses: the spread and resurgence of Japanese encephalitis, West Nile and dengue viruses. Nat Med. 2004;10:S98–109.CrossRefPubMed Mackenzie JS, Gubler DJ, Petersen LR. Emerging flaviviruses: the spread and resurgence of Japanese encephalitis, West Nile and dengue viruses. Nat Med. 2004;10:S98–109.CrossRefPubMed
9.
go back to reference Komar N, Langevin S, Hinten S, Nemeth N, Edwards E, Hettler D, et al. Experimental infection of North American birds with the New York 1999 strain of West Nile virus. Emerg Infect Dis. 2003;9:311–22.CrossRefPubMedPubMedCentral Komar N, Langevin S, Hinten S, Nemeth N, Edwards E, Hettler D, et al. Experimental infection of North American birds with the New York 1999 strain of West Nile virus. Emerg Infect Dis. 2003;9:311–22.CrossRefPubMedPubMedCentral
10.
go back to reference Glaser A. West Nile virus and North America: an unfolding story. Rev Sci Tech. 2004;23:557–68.PubMed Glaser A. West Nile virus and North America: an unfolding story. Rev Sci Tech. 2004;23:557–68.PubMed
11.
go back to reference Dauphin G, Zientara S. West Nile virus: recent trends in diagnosis and vaccine development. Vaccine. 2007;25:5563–76.CrossRefPubMed Dauphin G, Zientara S. West Nile virus: recent trends in diagnosis and vaccine development. Vaccine. 2007;25:5563–76.CrossRefPubMed
12.
go back to reference Crabtree M, Sang R, Lutomiah J, Richardson J, Miller B. Arbovirus surveillance of mosquitoes collected at sites of active Rift Valley fever virus transmission: Kenya, 2006–2007. J Med Entomol. 2009;46:961–4.CrossRefPubMed Crabtree M, Sang R, Lutomiah J, Richardson J, Miller B. Arbovirus surveillance of mosquitoes collected at sites of active Rift Valley fever virus transmission: Kenya, 2006–2007. J Med Entomol. 2009;46:961–4.CrossRefPubMed
13.
go back to reference LaBeaud a D, Sutherland LJ, Muiruri S, Muchiri EM, Gray LR, Zimmerman P a, et al. Arbovirus prevalence in mosquitoes, Kenya. Emerg Infect Dis. 2011;17:233–41.CrossRefPubMedPubMedCentral LaBeaud a D, Sutherland LJ, Muiruri S, Muchiri EM, Gray LR, Zimmerman P a, et al. Arbovirus prevalence in mosquitoes, Kenya. Emerg Infect Dis. 2011;17:233–41.CrossRefPubMedPubMedCentral
14.
go back to reference Miller BR, Nasci RS, Godsey MS, Savage HM, Lutwama JJ, Lanciotti RS, et al. First field evidence for natural vertical transmission of West Nile virus in Culex univittatus complex mosquitoes from Rift Valley Province. Kenya Am J Trop Med Hyg. 2000;62:240–6.PubMed Miller BR, Nasci RS, Godsey MS, Savage HM, Lutwama JJ, Lanciotti RS, et al. First field evidence for natural vertical transmission of West Nile virus in Culex univittatus complex mosquitoes from Rift Valley Province. Kenya Am J Trop Med Hyg. 2000;62:240–6.PubMed
15.
go back to reference Lutomiah JL, Koka H, Mutisya J, Yalwala S, Muthoni M, Makio A, et al. Ability of selected Kenyan mosquito (Diptera: Culicidae) species to transmit West Nile virus under laboratory conditions. J Med Entomol. 2011;48:1197–201.CrossRefPubMed Lutomiah JL, Koka H, Mutisya J, Yalwala S, Muthoni M, Makio A, et al. Ability of selected Kenyan mosquito (Diptera: Culicidae) species to transmit West Nile virus under laboratory conditions. J Med Entomol. 2011;48:1197–201.CrossRefPubMed
16.
go back to reference Bett B, Mohammed S, Sang R, Bukachi S, Lindahl J, Wanyoike S, Njeru DG I. Land use change and the risk of selected zoonotic diseases: observations from a case study in an arid/semi-arid area in Kenya. Oral Present. given 14th Int. Symp. Vet. Epidemiol. Econ. held Yucata, Mex. 2015. Bett B, Mohammed S, Sang R, Bukachi S, Lindahl J, Wanyoike S, Njeru DG I. Land use change and the risk of selected zoonotic diseases: observations from a case study in an arid/semi-arid area in Kenya. Oral Present. given 14th Int. Symp. Vet. Epidemiol. Econ. held Yucata, Mex. 2015.
17.
go back to reference Randall NJ, Blitvich BJ, Blanchong JA. Association between agricultural land use and West Nile Virus antibody prevalence in Iowa birds. J Wildl Dis. 2013;49:869–78.CrossRefPubMed Randall NJ, Blitvich BJ, Blanchong JA. Association between agricultural land use and West Nile Virus antibody prevalence in Iowa birds. J Wildl Dis. 2013;49:869–78.CrossRefPubMed
18.
go back to reference Komar N, Bessoff K, Diaz A, Amador M, Young G, Seda R, et al. Avian hosts of West Nile Virus in Puerto Rico. Vector-Borne Zoonotic Dis. 2012;12:47–54.CrossRefPubMed Komar N, Bessoff K, Diaz A, Amador M, Young G, Seda R, et al. Avian hosts of West Nile Virus in Puerto Rico. Vector-Borne Zoonotic Dis. 2012;12:47–54.CrossRefPubMed
19.
go back to reference Ndunguru J, Taylor NJ, Yadav J, Aly H, Legg JP, Aveling T, Thompson G, Fauquet CM. Application of FTA technology for sampling, recovery and molecular characterization of viral pathogens and virus-derived transgenes from plant tissues. Virology. 2005;25:425. Ndunguru J, Taylor NJ, Yadav J, Aly H, Legg JP, Aveling T, Thompson G, Fauquet CM. Application of FTA technology for sampling, recovery and molecular characterization of viral pathogens and virus-derived transgenes from plant tissues. Virology. 2005;25:425.
20.
go back to reference Johnson DJ, Ostlund EN, Pedersen DD, Schmitt BJ. Detection of North American West Nile virus in animal tissue by a reverse transcription-nested polymerase chain reaction assay. Emerg Infect Dis. 2001;7:739–41.CrossRefPubMedPubMedCentral Johnson DJ, Ostlund EN, Pedersen DD, Schmitt BJ. Detection of North American West Nile virus in animal tissue by a reverse transcription-nested polymerase chain reaction assay. Emerg Infect Dis. 2001;7:739–41.CrossRefPubMedPubMedCentral
21.
go back to reference Wheeler SS, Langevin SA, Brault AC, Woods L, Carroll BD, Reisen WK. Detection of persistent West Nile Virus RNA in experimentally and naturally infected Avian hosts. Am J Trop Med Hyg. 2012;87:559–64.CrossRefPubMedPubMedCentral Wheeler SS, Langevin SA, Brault AC, Woods L, Carroll BD, Reisen WK. Detection of persistent West Nile Virus RNA in experimentally and naturally infected Avian hosts. Am J Trop Med Hyg. 2012;87:559–64.CrossRefPubMedPubMedCentral
22.
23.
go back to reference May FJ, Davis CT, Tesh RB, Barrett ADT. Phylogeography of West Nile virus: from the cradle of evolution in Africa to Eurasia, Australia, and the Americas. J Virol. 2011;85:2964–74.CrossRefPubMed May FJ, Davis CT, Tesh RB, Barrett ADT. Phylogeography of West Nile virus: from the cradle of evolution in Africa to Eurasia, Australia, and the Americas. J Virol. 2011;85:2964–74.CrossRefPubMed
24.
go back to reference Smithburn KC, Jacobs HR. Neutralization-tests against neurotropic viruses with sera collected in central Africa. J Immunol. 1942;44:9–23. Smithburn KC, Jacobs HR. Neutralization-tests against neurotropic viruses with sera collected in central Africa. J Immunol. 1942;44:9–23.
25.
go back to reference Melnick JL, Paul JR, Riordan JT, Barnett VH, Goldblum N, Zabin E. Isolation from human sera in Egypt of a virus apparently identical to West Nile virus. Proc Soc Exp Biol Med. 1951;77:661–5.CrossRefPubMed Melnick JL, Paul JR, Riordan JT, Barnett VH, Goldblum N, Zabin E. Isolation from human sera in Egypt of a virus apparently identical to West Nile virus. Proc Soc Exp Biol Med. 1951;77:661–5.CrossRefPubMed
26.
go back to reference Lwande OW, Lutomiah J, Obanda V, Gakuya F, Mutisya J, Mulwa F, et al. Isolation of tick and mosquito-borne arboviruses from ticks sampled from livestock. 2013. p. 13. Lwande OW, Lutomiah J, Obanda V, Gakuya F, Mutisya J, Mulwa F, et al. Isolation of tick and mosquito-borne arboviruses from ticks sampled from livestock. 2013. p. 13.
27.
28.
go back to reference Eidson M, Komar N, Sorhage F, Nelson R, Talbot T, Mostashari F, et al. Crow deaths as a sentinel surveillance system for West Nile virus in the northeastern United States, 1999. Emerg Infect Dis. 2001;7:615–20.CrossRefPubMedPubMedCentral Eidson M, Komar N, Sorhage F, Nelson R, Talbot T, Mostashari F, et al. Crow deaths as a sentinel surveillance system for West Nile virus in the northeastern United States, 1999. Emerg Infect Dis. 2001;7:615–20.CrossRefPubMedPubMedCentral
29.
go back to reference Work TH, Hurlbut HS, Taylor RM. Indigenous wild birds of the Nile delta as potential West Nile virus circulating reservoirs. Am J Trop Med Hyg. 1955;4:872–88.PubMed Work TH, Hurlbut HS, Taylor RM. Indigenous wild birds of the Nile delta as potential West Nile virus circulating reservoirs. Am J Trop Med Hyg. 1955;4:872–88.PubMed
30.
go back to reference McIntosh BM, Dickinson DBMG. Ecological studies on Sindbis and West Nile viruses in South Africa. V. The response of birds to inoculation of virus. S Afr J Med Sci. 1969;34:77–82.PubMed McIntosh BM, Dickinson DBMG. Ecological studies on Sindbis and West Nile viruses in South Africa. V. The response of birds to inoculation of virus. S Afr J Med Sci. 1969;34:77–82.PubMed
31.
32.
go back to reference Lanciotti RS, Ebel GD, Deubel V, Kerst AJ, Murri S, Meyer R, et al. Complete genome sequences and phylogenetic analysis of West Nile virus strains isolated from the United States, Europe, and the Middle East. Virology. 2002;298:96–105.CrossRefPubMed Lanciotti RS, Ebel GD, Deubel V, Kerst AJ, Murri S, Meyer R, et al. Complete genome sequences and phylogenetic analysis of West Nile virus strains isolated from the United States, Europe, and the Middle East. Virology. 2002;298:96–105.CrossRefPubMed
33.
go back to reference Botha E, Markotter W, Wolfaardt M, Paweska JT, Swanepoel R, Palacios G, Nel LH, Venter M. Genetic determinants of virulence in pathogenic lineage 2 West Nile Virus Strains. Emerg Infect Dis. 2008;14:222–30.CrossRefPubMedPubMedCentral Botha E, Markotter W, Wolfaardt M, Paweska JT, Swanepoel R, Palacios G, Nel LH, Venter M. Genetic determinants of virulence in pathogenic lineage 2 West Nile Virus Strains. Emerg Infect Dis. 2008;14:222–30.CrossRefPubMedPubMedCentral
34.
go back to reference Lu Z, Fu S-H, Cao L, Tang C-J, Zhang S, Li Z-X, et al. Human infection with West Nile Virus, Xinjiang, China, 2011. Emerg Infect Dis. 2014;20:1421–3.CrossRefPubMedPubMedCentral Lu Z, Fu S-H, Cao L, Tang C-J, Zhang S, Li Z-X, et al. Human infection with West Nile Virus, Xinjiang, China, 2011. Emerg Infect Dis. 2014;20:1421–3.CrossRefPubMedPubMedCentral
35.
go back to reference Tajima F, Masatoshi N. Estimation of evolutionary distance between nucleotide sequences. Mol Biol Evol. 1984;1:269–85.PubMed Tajima F, Masatoshi N. Estimation of evolutionary distance between nucleotide sequences. Mol Biol Evol. 1984;1:269–85.PubMed
Metadata
Title
Detection of West Nile virus in wild birds in Tana River and Garissa Counties, Kenya
Authors
Doris Nyamwaya
Virginia Wang’ondu
Joshua Amimo
George Michuki
Moses Ogugo
Enoch Ontiri
Rosemary Sang
Johanna Lindahl
Delia Grace
Bernard Bett
Publication date
01-12-2016
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2016
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-016-2019-8

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