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Published in: Virology Journal 1/2011

Open Access 01-12-2011 | Methodology

The preparation of an infectious full-length cDNA clone of Saffold virus

Authors: Toshiki Himeda, Takushi Hosomi, Naeem Asif, Hiroyuki Shimizu, Takako Okuwa, Yasushi Muraki, Yoshiro Ohara

Published in: Virology Journal | Issue 1/2011

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Abstract

The pathogenicity of Saffold virus (SAFV) among humans still remains unclear, although it was identified as a novel human cardiovirus in 2007. In order to encourage the molecular pathogenetic studies of SAFV, we generated an infectious cDNA clone of SAFV type 3 (SAFV-3). The present study demonstrated that the synthesis of the full-length infectious RNA by T7 RNA polymerase was terminated by a homologous sequence motif with the human preproparathyroid hormone (PTH) signal in the SAFV-3 genome. To obtain the infectious RNA using T7 promoter, a variant of T7 RNA polymerase, which fails to recognize the PTH signal, was useful. This study will provide a valuable technical insight into the reverse genetics of SAFV.
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Literature
1.
go back to reference Brahic M, Bureau JF, Michiels T: The genetics of the persistent infection and demyelinating disease caused by Theiler's virus. Annu Rev Microbiol 2005, 59: 279-298. 10.1146/annurev.micro.59.030804.121242CrossRefPubMed Brahic M, Bureau JF, Michiels T: The genetics of the persistent infection and demyelinating disease caused by Theiler's virus. Annu Rev Microbiol 2005, 59: 279-298. 10.1146/annurev.micro.59.030804.121242CrossRefPubMed
2.
go back to reference Liang Z, Kumar ASM, Jones MS, Knowles NJ, Lipton HL: Phylogenetic analysis of the species Theilovirus: Emerging murine and human pathogens. J Virol 2008, 82: 11545-11554. 10.1128/JVI.01160-08PubMedCentralCrossRefPubMed Liang Z, Kumar ASM, Jones MS, Knowles NJ, Lipton HL: Phylogenetic analysis of the species Theilovirus: Emerging murine and human pathogens. J Virol 2008, 82: 11545-11554. 10.1128/JVI.01160-08PubMedCentralCrossRefPubMed
3.
go back to reference Oleszak EL, Chang JR, Friedman H, Katsetos CD, Platsoucas CD: Theiler's virus infection: a model for multiple sclerosis. Clin Microbiol Rev 2004, 17: 174-207. 10.1128/CMR.17.1.174-207.2004PubMedCentralCrossRefPubMed Oleszak EL, Chang JR, Friedman H, Katsetos CD, Platsoucas CD: Theiler's virus infection: a model for multiple sclerosis. Clin Microbiol Rev 2004, 17: 174-207. 10.1128/CMR.17.1.174-207.2004PubMedCentralCrossRefPubMed
4.
go back to reference Roos RP: Pathogenesis of Theiler's murine encephalomyelitis virus-induces disease. Clin Exp Neuroimmunol 2010, 1: 70-78. 10.1111/j.1759-1961.2010.00008.xCrossRef Roos RP: Pathogenesis of Theiler's murine encephalomyelitis virus-induces disease. Clin Exp Neuroimmunol 2010, 1: 70-78. 10.1111/j.1759-1961.2010.00008.xCrossRef
5.
go back to reference Takano-Maruyama M, Ohara Y, Asakura K, Okuwa T: Leader (L) and L* proteins of Theiler's murine encephalomyelitis virus (TMEV) and their regulation of the virus' biological activities. J Neuroinflammation 2006, 3: 19. 10.1186/1742-2094-3-19PubMedCentralCrossRefPubMed Takano-Maruyama M, Ohara Y, Asakura K, Okuwa T: Leader (L) and L* proteins of Theiler's murine encephalomyelitis virus (TMEV) and their regulation of the virus' biological activities. J Neuroinflammation 2006, 3: 19. 10.1186/1742-2094-3-19PubMedCentralCrossRefPubMed
6.
go back to reference Jones MS, Lukashov VV, Ganac RD, Schnurr DP: Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin. J Clin Microbiol 2007, 45: 2144-2150. 10.1128/JCM.00174-07PubMedCentralCrossRefPubMed Jones MS, Lukashov VV, Ganac RD, Schnurr DP: Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin. J Clin Microbiol 2007, 45: 2144-2150. 10.1128/JCM.00174-07PubMedCentralCrossRefPubMed
7.
go back to reference Abed Y, Boivin G: New Saffold cardioviruses in 3 children, Canada. Emerging Infectious Disease 2008, 14: 834-836. 10.3201/eid1405.071459CrossRef Abed Y, Boivin G: New Saffold cardioviruses in 3 children, Canada. Emerging Infectious Disease 2008, 14: 834-836. 10.3201/eid1405.071459CrossRef
8.
go back to reference Blinkova O, Kappor A, Victoria J, Jones M, Wolfe N, Naeem A, Shaukat S, Sharif S, Alam MM, Angez M, Zaidi S, Delwart EL: Cardioviruses are genetically diverse and cause common enteric infections in South Asian children. J Virol 2009, 83: 4631-4641. 10.1128/JVI.02085-08PubMedCentralCrossRefPubMed Blinkova O, Kappor A, Victoria J, Jones M, Wolfe N, Naeem A, Shaukat S, Sharif S, Alam MM, Angez M, Zaidi S, Delwart EL: Cardioviruses are genetically diverse and cause common enteric infections in South Asian children. J Virol 2009, 83: 4631-4641. 10.1128/JVI.02085-08PubMedCentralCrossRefPubMed
9.
go back to reference Blinkova O, Rosario K, Li L, Kappor A, Slikas B, Bernardin F, Breitbart M, Delwart E: Frequent detection of highly diverse variants of cardiovirus, cosavirus, bocavirus, and circovirus in sewage samples collected in the United States. J Clin Microbiol 2009, 47: 3507-3513. 10.1128/JCM.01062-09PubMedCentralCrossRefPubMed Blinkova O, Rosario K, Li L, Kappor A, Slikas B, Bernardin F, Breitbart M, Delwart E: Frequent detection of highly diverse variants of cardiovirus, cosavirus, bocavirus, and circovirus in sewage samples collected in the United States. J Clin Microbiol 2009, 47: 3507-3513. 10.1128/JCM.01062-09PubMedCentralCrossRefPubMed
10.
go back to reference Zoll J, Erkens Hulshof S, Lanke K, Verduyn Lunel F, Melchers WJ, Schoondermark-van de Ven E, Roivainen M, Galama JM, van Kuppeveld FJ: Saffold virus, a human Theiler's-like cardiovirus, is ubiquitous and causes infection early in life. PLoS Pathog 2009, 5: e1000416. 10.1371/journal.ppat.1000416PubMedCentralCrossRefPubMed Zoll J, Erkens Hulshof S, Lanke K, Verduyn Lunel F, Melchers WJ, Schoondermark-van de Ven E, Roivainen M, Galama JM, van Kuppeveld FJ: Saffold virus, a human Theiler's-like cardiovirus, is ubiquitous and causes infection early in life. PLoS Pathog 2009, 5: e1000416. 10.1371/journal.ppat.1000416PubMedCentralCrossRefPubMed
11.
go back to reference van der Werf S, Bradley J, Wimmer E, Studier FW, Dunn JJ: Synthesis of infectious poliovirus RNA by purified T7 RNA polymerase. Proc Natl Acad Sci USA 1986, 83: 2330-2334. 10.1073/pnas.83.8.2330PubMedCentralCrossRefPubMed van der Werf S, Bradley J, Wimmer E, Studier FW, Dunn JJ: Synthesis of infectious poliovirus RNA by purified T7 RNA polymerase. Proc Natl Acad Sci USA 1986, 83: 2330-2334. 10.1073/pnas.83.8.2330PubMedCentralCrossRefPubMed
12.
go back to reference Roos RP, Stein S, Ohara Y, Fu J, Semler BL: Infectious cDNA clones of the DA strain of Theiler's murine encephalomyelitis virus. J Virol 1989, 63: 5492-5496.PubMedCentralPubMed Roos RP, Stein S, Ohara Y, Fu J, Semler BL: Infectious cDNA clones of the DA strain of Theiler's murine encephalomyelitis virus. J Virol 1989, 63: 5492-5496.PubMedCentralPubMed
13.
go back to reference He B, Kukarin A, Temiakov D, Chin-Bow ST, Lyakhov DL, Rong M, Durbin RK, McAllister WT: Characterization of an unusual, sequence-specific termination signal for T7 RNA polymerase. J Biol Chem 1998, 273: 18802-18811. 10.1074/jbc.273.30.18802CrossRefPubMed He B, Kukarin A, Temiakov D, Chin-Bow ST, Lyakhov DL, Rong M, Durbin RK, McAllister WT: Characterization of an unusual, sequence-specific termination signal for T7 RNA polymerase. J Biol Chem 1998, 273: 18802-18811. 10.1074/jbc.273.30.18802CrossRefPubMed
14.
go back to reference Lyakhov DL, He B, Zhang X, Studier FW, Dunn JJ, McAllister WT: Pausing and termination by bacteriophage T7 RNA polymerase. J Mol Biol 1998, 280: 201-213. 10.1006/jmbi.1998.1854CrossRefPubMed Lyakhov DL, He B, Zhang X, Studier FW, Dunn JJ, McAllister WT: Pausing and termination by bacteriophage T7 RNA polymerase. J Mol Biol 1998, 280: 201-213. 10.1006/jmbi.1998.1854CrossRefPubMed
15.
go back to reference Sohn Y, Kang C: Sequential multiple functions of the conserved sequence in sequence-specific termination by T7 RNA polymerase. Proc Natl Acad Sci USA 2005, 102: 75-80. 10.1073/pnas.0406581101PubMedCentralCrossRefPubMed Sohn Y, Kang C: Sequential multiple functions of the conserved sequence in sequence-specific termination by T7 RNA polymerase. Proc Natl Acad Sci USA 2005, 102: 75-80. 10.1073/pnas.0406581101PubMedCentralCrossRefPubMed
Metadata
Title
The preparation of an infectious full-length cDNA clone of Saffold virus
Authors
Toshiki Himeda
Takushi Hosomi
Naeem Asif
Hiroyuki Shimizu
Takako Okuwa
Yasushi Muraki
Yoshiro Ohara
Publication date
01-12-2011
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2011
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-8-110

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