Skip to main content
Top
Published in: BMC Immunology 1/2009

Open Access 01-12-2009 | Methodology article

Enrichment and analysis of secretory lysosomes from lymphocyte populations

Authors: Hendrik Schmidt, Christoph Gelhaus, Ralph Lucius, Melanie Nebendahl, Matthias Leippe, Ottmar Janssen

Published in: BMC Immunology | Issue 1/2009

Login to get access

Abstract

Background

In specialized cells, such as mast cells, macrophages, T lymphocytes and Natural Killer cells in the immune system and for instance melanocytes in the skin, secretory lysosomes (SL) have evolved as bifunctional organelles that combine degradative and secretory properties. Mutations in lysosomal storage, transport or sorting molecules are associated with severe immunodeficiencies, autoimmunity and (partial) albinism. In order to analyze the function and content of secretory lysosomes in different cell populations, an efficient enrichment of these organelles is mandatory.

Results

Based on a combination of differential and density gradient centrifugation steps, we provide a protocol to enrich intact SL from expanded hematopoietic cells, here T lymphocytes and Natural Killer cells. Individual fractions were initially characterized by Western blotting using antibodies against an array of marker proteins for intracellular compartments. As indicated by the presence of LAMP-3 (CD63) and FasL (CD178), we obtained a selective enrichment of SL in one of the resulting organelle fractions. The robustness and reproducibility of the applied separation protocol was examined by a high-resolution proteome analysis of individual SL preparations of different donors by 2D difference gel electrophoresis (2D-DIGE).

Conclusion

The provided protocol is readily applicable to enrich and isolate intact secretory vesicles from individual cell populations. It can be used to compare SL of normal and transformed cell lines or primary cell populations from healthy donors and patients with lysosomal storage or transport diseases, or from corresponding mutant mice. A subsequent proteome analysis allows the characterization of molecules involved in lysosomal maturation and cytotoxic effector function at high-resolution.
Appendix
Available only for authorised users
Literature
2.
go back to reference Blott EJ, Griffiths GM: Secretory lysosomes. Nat Rev Mol Cell Biol. 2002, 3: 122-131. 10.1038/nrm732.CrossRefPubMed Blott EJ, Griffiths GM: Secretory lysosomes. Nat Rev Mol Cell Biol. 2002, 3: 122-131. 10.1038/nrm732.CrossRefPubMed
3.
go back to reference Lettau M, Schmidt H, Kabelitz D, Janssen O: Secretory lysosomes and their cargo in T and NK cells. Immunol Lett. 2007, 108: 10-19. 10.1016/j.imlet.2006.10.001.CrossRefPubMed Lettau M, Schmidt H, Kabelitz D, Janssen O: Secretory lysosomes and their cargo in T and NK cells. Immunol Lett. 2007, 108: 10-19. 10.1016/j.imlet.2006.10.001.CrossRefPubMed
4.
go back to reference Stinchcombe J, Bossi G, Griffiths GM: Linking albinism and immunity: the secrets of secretory lysosomes. Science. 2004, 305: 55-59. 10.1126/science.1095291.CrossRefPubMed Stinchcombe J, Bossi G, Griffiths GM: Linking albinism and immunity: the secrets of secretory lysosomes. Science. 2004, 305: 55-59. 10.1126/science.1095291.CrossRefPubMed
5.
go back to reference Peters PJ, Borst J, Oorschot V, Fukuda M, Krahenbuhl O, Tschopp J, Slot JW, Geuze HJ: Cytotoxic T lymphocyte granules are secretory lysosomes, containing both perforin and granzymes. J Exp Med. 1991, 173: 1099-1109. 10.1084/jem.173.5.1099.CrossRefPubMed Peters PJ, Borst J, Oorschot V, Fukuda M, Krahenbuhl O, Tschopp J, Slot JW, Geuze HJ: Cytotoxic T lymphocyte granules are secretory lysosomes, containing both perforin and granzymes. J Exp Med. 1991, 173: 1099-1109. 10.1084/jem.173.5.1099.CrossRefPubMed
6.
go back to reference Pena SV, Hanson DA, Carr BA, Coralski TJ, Krensky AM: Processing, subcellular localization, and function of 519 (Granulysin), a human late T cell activation molecule with homology to small, lytic, granule proteins. J Immunol. 1997, 158: 2680-2688.PubMed Pena SV, Hanson DA, Carr BA, Coralski TJ, Krensky AM: Processing, subcellular localization, and function of 519 (Granulysin), a human late T cell activation molecule with homology to small, lytic, granule proteins. J Immunol. 1997, 158: 2680-2688.PubMed
7.
go back to reference Blott EJ, Bossi G, Clark R, Zvelebil M, Griffiths GM: Fas ligand is targeted to secretory lysosomes via a proline-rich domain in its cytoplasmic tail. J Cell Sci. 2001, 114: 2405-2416.PubMed Blott EJ, Bossi G, Clark R, Zvelebil M, Griffiths GM: Fas ligand is targeted to secretory lysosomes via a proline-rich domain in its cytoplasmic tail. J Cell Sci. 2001, 114: 2405-2416.PubMed
8.
go back to reference Janssen O, Qian J, Linkermann A, Kabelitz D: CD95 ligand – death factor and costimulatory molecule?. Cell Death Differ. 2003, 10: 1215-1225. 10.1038/sj.cdd.4401305.CrossRefPubMed Janssen O, Qian J, Linkermann A, Kabelitz D: CD95 ligand – death factor and costimulatory molecule?. Cell Death Differ. 2003, 10: 1215-1225. 10.1038/sj.cdd.4401305.CrossRefPubMed
9.
go back to reference Grujic M, Braga T, Lukinius A, Eloranta M-L, Knight SD, Pejler G, Abring M: Serglycin-deficient cytotoxic T lymphocytes display defective secretory granule maturation and granzyme B storage. J Biol Chem. 2005, 280: 33411-33418. 10.1074/jbc.M501708200.CrossRefPubMed Grujic M, Braga T, Lukinius A, Eloranta M-L, Knight SD, Pejler G, Abring M: Serglycin-deficient cytotoxic T lymphocytes display defective secretory granule maturation and granzyme B storage. J Biol Chem. 2005, 280: 33411-33418. 10.1074/jbc.M501708200.CrossRefPubMed
10.
go back to reference Trambas CM, Griffiths GM: Delivering the kiss of death. Nat Immunol. 2003, 4: 399-403. 10.1038/ni0503-399.CrossRefPubMed Trambas CM, Griffiths GM: Delivering the kiss of death. Nat Immunol. 2003, 4: 399-403. 10.1038/ni0503-399.CrossRefPubMed
11.
go back to reference Lettau M, Qian J, Linkermann A, Latreille M, Larose L, Kabelitz D, Janssen O: The adaptor protein Nck interacts with Fas ligand: Guiding the death factor to the cytotoxic immunological synapse. Proc Natl Acad Sci USA. 2006, 103: 5911-5916. 10.1073/pnas.0508562103.PubMedCentralCrossRefPubMed Lettau M, Qian J, Linkermann A, Latreille M, Larose L, Kabelitz D, Janssen O: The adaptor protein Nck interacts with Fas ligand: Guiding the death factor to the cytotoxic immunological synapse. Proc Natl Acad Sci USA. 2006, 103: 5911-5916. 10.1073/pnas.0508562103.PubMedCentralCrossRefPubMed
12.
13.
go back to reference Burkhardt JK, Wiebel FA, Hester S, Argon Y: The giant organelles in beige and Chediak-Higashi fibroblasts are derived from late endosomes and mature lysosomes. J Exp Med. 1993, 178: 1845-1856. 10.1084/jem.178.6.1845.CrossRefPubMed Burkhardt JK, Wiebel FA, Hester S, Argon Y: The giant organelles in beige and Chediak-Higashi fibroblasts are derived from late endosomes and mature lysosomes. J Exp Med. 1993, 178: 1845-1856. 10.1084/jem.178.6.1845.CrossRefPubMed
14.
go back to reference Wattiaux R, Wattiaux-De CS, Ronveaux-dupal MF, Dubois F: Isolation of rat liver lysosomes by isopycnic centrifugation in a metrizamide gradient. J Cell Biol. 1978, 78: 349-368. 10.1083/jcb.78.2.349.CrossRefPubMed Wattiaux R, Wattiaux-De CS, Ronveaux-dupal MF, Dubois F: Isolation of rat liver lysosomes by isopycnic centrifugation in a metrizamide gradient. J Cell Biol. 1978, 78: 349-368. 10.1083/jcb.78.2.349.CrossRefPubMed
15.
go back to reference Leighton F, Poole B, Beaufay H, Baudhuin P, Coffey JW, Fowler S, De DC: The large-scale separation of peroxisomes, mitochondria, and lysosomes from the livers of rats injected with triton WR-1339. Improved isolation procedures, automated analysis, biochemical and morphological properties of fractions. J Cell Biol. 1968, 37: 482-513. 10.1083/jcb.37.2.482.PubMedCentralCrossRefPubMed Leighton F, Poole B, Beaufay H, Baudhuin P, Coffey JW, Fowler S, De DC: The large-scale separation of peroxisomes, mitochondria, and lysosomes from the livers of rats injected with triton WR-1339. Improved isolation procedures, automated analysis, biochemical and morphological properties of fractions. J Cell Biol. 1968, 37: 482-513. 10.1083/jcb.37.2.482.PubMedCentralCrossRefPubMed
16.
go back to reference Arai K, Kanaseki T, Ohkuma S: Isolation of highly purified lysosomes from rat liver: identification of electron carrier components on lysosomal membranes. J Biochem. 1991, 110: 541-547.PubMed Arai K, Kanaseki T, Ohkuma S: Isolation of highly purified lysosomes from rat liver: identification of electron carrier components on lysosomal membranes. J Biochem. 1991, 110: 541-547.PubMed
17.
go back to reference Ford T, Graham J, Rickwood D: Iodixanol: a nonionic iso-osmotic centrifugation medium for the formation of self-generated gradients. Anal Biochem. 1994, 220: 360-366. 10.1006/abio.1994.1350.CrossRefPubMed Ford T, Graham J, Rickwood D: Iodixanol: a nonionic iso-osmotic centrifugation medium for the formation of self-generated gradients. Anal Biochem. 1994, 220: 360-366. 10.1006/abio.1994.1350.CrossRefPubMed
18.
go back to reference Graham J, Ford T, Rickwood D: The preparation of subcellular organelles from mouse liver in self-generated gradients of iodixanol. Anal Biochem. 1994, 220: 367-373. 10.1006/abio.1994.1351.CrossRefPubMed Graham J, Ford T, Rickwood D: The preparation of subcellular organelles from mouse liver in self-generated gradients of iodixanol. Anal Biochem. 1994, 220: 367-373. 10.1006/abio.1994.1351.CrossRefPubMed
19.
go back to reference Graham JM: Isolation of lysosomes from tissues and cells by differential and density gradient centrifugation. Curr Protoc Cell Biol. 2001, Chapter 3 (Unit 3.6): Graham JM: Isolation of lysosomes from tissues and cells by differential and density gradient centrifugation. Curr Protoc Cell Biol. 2001, Chapter 3 (Unit 3.6):
20.
go back to reference Borregaard N, Heiple JM, Simons ER, Clark RA: Subcellular localization of the b-cytochrome component of the human neutrophil microbicidal oxidase: translocation during activation. J Cell Biol. 1983, 97: 52-61. 10.1083/jcb.97.1.52.CrossRefPubMed Borregaard N, Heiple JM, Simons ER, Clark RA: Subcellular localization of the b-cytochrome component of the human neutrophil microbicidal oxidase: translocation during activation. J Cell Biol. 1983, 97: 52-61. 10.1083/jcb.97.1.52.CrossRefPubMed
21.
go back to reference Millard PJ, Henkart MP, Reynolds CW, Henkart PA: Purification and properties of cytoplasmic granules from cytotoxic rat LGL tumors. J Immunol. 1984, 132: 3197-3204.PubMed Millard PJ, Henkart MP, Reynolds CW, Henkart PA: Purification and properties of cytoplasmic granules from cytotoxic rat LGL tumors. J Immunol. 1984, 132: 3197-3204.PubMed
22.
go back to reference Podack ER, Konigsberg PJ: Cytolytic T cell granules. Isolation, structural, biochemical, and functional characterization. J Exp Med. 1984, 160: 695-710. 10.1084/jem.160.3.695.CrossRefPubMed Podack ER, Konigsberg PJ: Cytolytic T cell granules. Isolation, structural, biochemical, and functional characterization. J Exp Med. 1984, 160: 695-710. 10.1084/jem.160.3.695.CrossRefPubMed
23.
go back to reference Davis JE, Sutton VR, Browne KA, Trapani JA: Purification of natural killer cell cytotoxic granules for assaying target cell apoptosis. J Immunol Methods. 2003, 276: 59-68. 10.1016/S0022-1759(03)00077-2.CrossRefPubMed Davis JE, Sutton VR, Browne KA, Trapani JA: Purification of natural killer cell cytotoxic granules for assaying target cell apoptosis. J Immunol Methods. 2003, 276: 59-68. 10.1016/S0022-1759(03)00077-2.CrossRefPubMed
24.
go back to reference Unlu M, Morgan ME, Minden JS: Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis. 1997, 18: 2071-2077. 10.1002/elps.1150181133.CrossRefPubMed Unlu M, Morgan ME, Minden JS: Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis. 1997, 18: 2071-2077. 10.1002/elps.1150181133.CrossRefPubMed
25.
go back to reference Lettau M, Paulsen M, Kabelitz D, Janssen O: Storage, expression and function of Fas ligand, the key death factor of immune cells. Curr Med Chem. 2008, 15: 1684-1696. 10.2174/092986708784872384.CrossRefPubMed Lettau M, Paulsen M, Kabelitz D, Janssen O: Storage, expression and function of Fas ligand, the key death factor of immune cells. Curr Med Chem. 2008, 15: 1684-1696. 10.2174/092986708784872384.CrossRefPubMed
26.
go back to reference Xu Y, Wong SH, Tang BL, Subramaniam VN, Zhang T, Hong W: A 29-kilodalton Golgi soluble N-ethylmaleimide-sensitive factor attachment protein receptor (Vti1-rp2) implicated in protein trafficking in the secretory pathway. J Biol Chem. 1998, 273: 21783-21789. 10.1074/jbc.273.34.21783.CrossRefPubMed Xu Y, Wong SH, Tang BL, Subramaniam VN, Zhang T, Hong W: A 29-kilodalton Golgi soluble N-ethylmaleimide-sensitive factor attachment protein receptor (Vti1-rp2) implicated in protein trafficking in the secretory pathway. J Biol Chem. 1998, 273: 21783-21789. 10.1074/jbc.273.34.21783.CrossRefPubMed
27.
go back to reference Bascom RA, Srinivasan S, Nussbaum RL: Identification and characterization of golgin-84, a novel Golgi integral membrane protein with a cytoplasmic coiled-coil domain. J Biol Chem. 1999, 274: 2953-2962. 10.1074/jbc.274.5.2953.CrossRefPubMed Bascom RA, Srinivasan S, Nussbaum RL: Identification and characterization of golgin-84, a novel Golgi integral membrane protein with a cytoplasmic coiled-coil domain. J Biol Chem. 1999, 274: 2953-2962. 10.1074/jbc.274.5.2953.CrossRefPubMed
28.
go back to reference Nakagawa M, Miranda AF: A monoclonal antibody against cytochrome c oxidase distinguishes cardiac and skeletal muscle mitochondria. Exp Cell Res. 1987, 168: 44-52. 10.1016/0014-4827(87)90414-9.CrossRefPubMed Nakagawa M, Miranda AF: A monoclonal antibody against cytochrome c oxidase distinguishes cardiac and skeletal muscle mitochondria. Exp Cell Res. 1987, 168: 44-52. 10.1016/0014-4827(87)90414-9.CrossRefPubMed
29.
go back to reference Yokota S, Fahimi HD: The peroxisome (microbody) membrane: effects of detergents and lipid solvents on its ultrastructure and permeability to catalase. Histochem J. 1978, 10: 469-487. 10.1007/BF01003010.CrossRefPubMed Yokota S, Fahimi HD: The peroxisome (microbody) membrane: effects of detergents and lipid solvents on its ultrastructure and permeability to catalase. Histochem J. 1978, 10: 469-487. 10.1007/BF01003010.CrossRefPubMed
30.
go back to reference Ting J, Lee AS: Human gene encoding the 78,000-dalton glucose-regulated protein and its pseudogene: structure, conservation, and regulation. DNA. 1988, 7: 275-286. 10.1089/dna.1988.7.275.CrossRefPubMed Ting J, Lee AS: Human gene encoding the 78,000-dalton glucose-regulated protein and its pseudogene: structure, conservation, and regulation. DNA. 1988, 7: 275-286. 10.1089/dna.1988.7.275.CrossRefPubMed
31.
go back to reference Mu FT, Callaghan JM, Steele-Mortimer O, Stenmark H, Parton RG, Campbell PL, McCluskey J, Yeo JP, Tock EP, Toh BH: EEA1, an early endosome-associated protein. EEA1 is a conserved alpha-helical peripheral membrane protein flanked by cysteine "fingers" and contains a calmodulin-binding IQ motif. J Biol Chem. 1995, 270: 13503-13511. 10.1074/jbc.270.22.13503.CrossRefPubMed Mu FT, Callaghan JM, Steele-Mortimer O, Stenmark H, Parton RG, Campbell PL, McCluskey J, Yeo JP, Tock EP, Toh BH: EEA1, an early endosome-associated protein. EEA1 is a conserved alpha-helical peripheral membrane protein flanked by cysteine "fingers" and contains a calmodulin-binding IQ motif. J Biol Chem. 1995, 270: 13503-13511. 10.1074/jbc.270.22.13503.CrossRefPubMed
32.
go back to reference Schmidt H, Gelhaus C, Nebendahl M, Lettau M, Watzl C, Kabelitz D, Leippe M, Janssen O: 2-D DIGE analyses of enriched secretory lysosomes reveal heterogeneous profiles of functionally relevant proteins in leukemic and activated human NK cells. Proteomics. 2008, 8: 2911-2925. 10.1002/pmic.200800170.CrossRefPubMed Schmidt H, Gelhaus C, Nebendahl M, Lettau M, Watzl C, Kabelitz D, Leippe M, Janssen O: 2-D DIGE analyses of enriched secretory lysosomes reveal heterogeneous profiles of functionally relevant proteins in leukemic and activated human NK cells. Proteomics. 2008, 8: 2911-2925. 10.1002/pmic.200800170.CrossRefPubMed
33.
go back to reference Wattiaux R, Wattiaux-De CS: Iodinated Density Gradient Media – a practical approach. 1983, Oxford, UK: IRL Press at Oxford University Press, 119-137. Wattiaux R, Wattiaux-De CS: Iodinated Density Gradient Media – a practical approach. 1983, Oxford, UK: IRL Press at Oxford University Press, 119-137.
34.
go back to reference Hrebicek T, Durrschmid K, Auer N, Bayer K, Rizzi A: Effect of CyDye minimum labeling in differential gel electrophoresis on the reliability of protein identification. Electrophoresis. 2007, 28: 1161-1169. 10.1002/elps.200600639.CrossRefPubMed Hrebicek T, Durrschmid K, Auer N, Bayer K, Rizzi A: Effect of CyDye minimum labeling in differential gel electrophoresis on the reliability of protein identification. Electrophoresis. 2007, 28: 1161-1169. 10.1002/elps.200600639.CrossRefPubMed
35.
go back to reference Chi A, Valencia JC, Hu ZZ, Watabe H, Yamaguchi H, Mangini NJ, Huang H, Canfield VA, Cheng KC, Yang F, et al.: Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. J Proteome Res. 2006, 5: 3135-3144. 10.1021/pr060363j.CrossRefPubMed Chi A, Valencia JC, Hu ZZ, Watabe H, Yamaguchi H, Mangini NJ, Huang H, Canfield VA, Cheng KC, Yang F, et al.: Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. J Proteome Res. 2006, 5: 3135-3144. 10.1021/pr060363j.CrossRefPubMed
36.
go back to reference Wilkins MR, Appel RD, Van Eyk JE, Chung MC, Gorg A, Hecker M, Huber LA, Langen H, Link AJ, Paik YK, et al.: Guidelines for the next 10 years of proteomics. Proteomics. 2006, 6: 4-8. 10.1002/pmic.200500856.CrossRefPubMed Wilkins MR, Appel RD, Van Eyk JE, Chung MC, Gorg A, Hecker M, Huber LA, Langen H, Link AJ, Paik YK, et al.: Guidelines for the next 10 years of proteomics. Proteomics. 2006, 6: 4-8. 10.1002/pmic.200500856.CrossRefPubMed
37.
go back to reference Rabilloud T: Use of thiourea to increase the solubility of membrane proteins in two-dimensional electrophoresis. Electrophoresis. 1998, 19: 758-760. 10.1002/elps.1150190526.CrossRefPubMed Rabilloud T: Use of thiourea to increase the solubility of membrane proteins in two-dimensional electrophoresis. Electrophoresis. 1998, 19: 758-760. 10.1002/elps.1150190526.CrossRefPubMed
38.
go back to reference Tonge R, Shaw J, Middleton B, Rowlinson R, Rayner S, Young J, Pognan F, Hawkins E, Currie I, Davison M: Validation and development of fluorescence two-dimensional differential gel electrophoresis proteomics technology. Proteomics. 2001, 1: 377-396. 10.1002/1615-9861(200103)1:3<377::AID-PROT377>3.0.CO;2-6.CrossRefPubMed Tonge R, Shaw J, Middleton B, Rowlinson R, Rayner S, Young J, Pognan F, Hawkins E, Currie I, Davison M: Validation and development of fluorescence two-dimensional differential gel electrophoresis proteomics technology. Proteomics. 2001, 1: 377-396. 10.1002/1615-9861(200103)1:3<377::AID-PROT377>3.0.CO;2-6.CrossRefPubMed
39.
go back to reference Gelhaus C, Fritsch J, Krause E, Leippe M: Fractionation and identification of proteins by 2-DE and MS: towards a proteomic analysis of Plasmodium falciparum. Proteomics. 2005, 5: 4213-4222. 10.1002/pmic.200401285.CrossRefPubMed Gelhaus C, Fritsch J, Krause E, Leippe M: Fractionation and identification of proteins by 2-DE and MS: towards a proteomic analysis of Plasmodium falciparum. Proteomics. 2005, 5: 4213-4222. 10.1002/pmic.200401285.CrossRefPubMed
Metadata
Title
Enrichment and analysis of secretory lysosomes from lymphocyte populations
Authors
Hendrik Schmidt
Christoph Gelhaus
Ralph Lucius
Melanie Nebendahl
Matthias Leippe
Ottmar Janssen
Publication date
01-12-2009
Publisher
BioMed Central
Published in
BMC Immunology / Issue 1/2009
Electronic ISSN: 1471-2172
DOI
https://doi.org/10.1186/1471-2172-10-41

Other articles of this Issue 1/2009

BMC Immunology 1/2009 Go to the issue