Skip to main content
Top
Published in: European Journal of Clinical Microbiology & Infectious Diseases 1/2019

01-01-2019 | Original Article

Evaluation of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for identifying Burkholderia pseudomallei and Burkholderia thailandensis isolates

Authors: Jin Li, Weiwei Hu, Fengling Zhang, Min Li, Chenglong Rao, Weiping Lu

Published in: European Journal of Clinical Microbiology & Infectious Diseases | Issue 1/2019

Login to get access

Abstract

Since Burkholderia thailandensis is included in the reference spectra of the VITEK MS libraries rather than Burkholderia pseudomallei, B. pseudomallei cannot be correctly identified in the current version of VITEK MS. This study was undertaken to evaluate the utility of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) with the VITEK MS plus system in the detection of B. pseudomallei and B. thailandensis isolates. For each species, we increased the reference spectra, and then, a SuperSpectrum was created based on the selection of 39 specific masses. In a second step, we validated the SuperSpectra with 106 isolates identified by 16S rRNA gene sequencing. The results showed that there was 100% agreement between the validation strains analyzed by MALDI-TOF MS and those evaluated using 16S rRNA gene sequencing analysis methods. Therefore, MALDI-TOF MS is a promising, rapid, and economical method to monitor the outbreaks and spread of B. pseudomallei and B. thailandensis isolates.
Appendix
Available only for authorised users
Literature
1.
go back to reference Peto L, Nadjm B, Horby P et al (2014) The bacterial aetiology of adult community-acquired pneumonia in Asia: a systematic review. Trans R Soc Trop Med Hyg 108(6):326–337CrossRefPubMedPubMedCentral Peto L, Nadjm B, Horby P et al (2014) The bacterial aetiology of adult community-acquired pneumonia in Asia: a systematic review. Trans R Soc Trop Med Hyg 108(6):326–337CrossRefPubMedPubMedCentral
2.
go back to reference Kingsley PV, Leader M, Nagodawithana NS, Tipre M, Sathiakumar N (2016) Melioidosis in Malaysia: a review of case reports. PLoS Negl Trop Dis 10(12):e0005182CrossRefPubMedPubMedCentral Kingsley PV, Leader M, Nagodawithana NS, Tipre M, Sathiakumar N (2016) Melioidosis in Malaysia: a review of case reports. PLoS Negl Trop Dis 10(12):e0005182CrossRefPubMedPubMedCentral
3.
go back to reference Perumal SR, Stiles BG, Sethi G, LHK L (2017) Melioidosis: clinical impact and public health threat in the tropics. PLoS Negl Trop Dis 11(5):e0004738CrossRef Perumal SR, Stiles BG, Sethi G, LHK L (2017) Melioidosis: clinical impact and public health threat in the tropics. PLoS Negl Trop Dis 11(5):e0004738CrossRef
4.
go back to reference Suntornsut P, Wongsuwan N, Malasit M et al (2016) Barriers and recommended interventions to prevent melioidosis in Northeast Thailand: a focus group study using the behaviour change wheel. PLoS Negl Trop Dis 10(7):e0004823CrossRefPubMedPubMedCentral Suntornsut P, Wongsuwan N, Malasit M et al (2016) Barriers and recommended interventions to prevent melioidosis in Northeast Thailand: a focus group study using the behaviour change wheel. PLoS Negl Trop Dis 10(7):e0004823CrossRefPubMedPubMedCentral
6.
go back to reference Currie BJ, Dance DA, Cheng AC (2008) The global distribution of Burkholderia pseudomallei and melioidosis: an update. Trans R Soc Trop Med Hyg 102(Suppl 1):S1–S4CrossRefPubMed Currie BJ, Dance DA, Cheng AC (2008) The global distribution of Burkholderia pseudomallei and melioidosis: an update. Trans R Soc Trop Med Hyg 102(Suppl 1):S1–S4CrossRefPubMed
7.
go back to reference Ma G, Zheng D, Cai Q, Yuan Z (2010) Prevalence of Burkholderia pseudomallei in Guangxi, China. Epidemiol Infect 138(1):37–39CrossRefPubMed Ma G, Zheng D, Cai Q, Yuan Z (2010) Prevalence of Burkholderia pseudomallei in Guangxi, China. Epidemiol Infect 138(1):37–39CrossRefPubMed
8.
go back to reference Fang Y, Huang Y, Li Q et al (2012) First genome sequence of a Burkholderia pseudomallei isolate in China, strain BPC006, obtained from a melioidosis patient in Hainan. J Bacteriol 194(23):6604–6605CrossRefPubMedPubMedCentral Fang Y, Huang Y, Li Q et al (2012) First genome sequence of a Burkholderia pseudomallei isolate in China, strain BPC006, obtained from a melioidosis patient in Hainan. J Bacteriol 194(23):6604–6605CrossRefPubMedPubMedCentral
10.
go back to reference Wang XM, Zheng X, Wu H et al (2016) Multilocus sequence typing of clinical isolates of Burkholderia pseudomallei collected in Hainan, a Tropical Island of Southern China. Am J Trop Med Hyg 95(4):760–764CrossRefPubMedPubMedCentral Wang XM, Zheng X, Wu H et al (2016) Multilocus sequence typing of clinical isolates of Burkholderia pseudomallei collected in Hainan, a Tropical Island of Southern China. Am J Trop Med Hyg 95(4):760–764CrossRefPubMedPubMedCentral
11.
go back to reference Fang Y, Chen H, Hu Y et al (2016) Burkholderia pseudomallei-derived miR-3473 enhances NF-κB via targeting TRAF3 and is associated with different inflammatory responses compared to Burkholderia thailandensis in murine macrophages. BMC Microbiol 16(1):283CrossRefPubMedPubMedCentral Fang Y, Chen H, Hu Y et al (2016) Burkholderia pseudomallei-derived miR-3473 enhances NF-κB via targeting TRAF3 and is associated with different inflammatory responses compared to Burkholderia thailandensis in murine macrophages. BMC Microbiol 16(1):283CrossRefPubMedPubMedCentral
12.
go back to reference Wang H, Chen YL, Teng SH, Xu ZP, Xu YC, Hsueh PR (2016) Evaluation of the bruker biotyper matrix-assisted laser desorption/ionization time-of-flight mass spectrometry system for identification of clinical and environmental isolates of Burkholderia pseudomallei. Front Microbiol 7:415PubMedPubMedCentral Wang H, Chen YL, Teng SH, Xu ZP, Xu YC, Hsueh PR (2016) Evaluation of the bruker biotyper matrix-assisted laser desorption/ionization time-of-flight mass spectrometry system for identification of clinical and environmental isolates of Burkholderia pseudomallei. Front Microbiol 7:415PubMedPubMedCentral
13.
go back to reference Jang HR, Lee CW, Ok SJ et al (2015) Melioidosis presenting as a mycotic aneurysm in a Korean patient, diagnosed by 16S rRNA sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Int J Infect Dis 38:62–64CrossRefPubMed Jang HR, Lee CW, Ok SJ et al (2015) Melioidosis presenting as a mycotic aneurysm in a Korean patient, diagnosed by 16S rRNA sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Int J Infect Dis 38:62–64CrossRefPubMed
14.
go back to reference Weissert C, Dollenmaier G, Rafeiner P, Riehm J, Schultze D (2009) Burkholderia pseudomallei misidentified by automated system. Emerg Infect Dis 15(11):1799–1801CrossRefPubMedPubMedCentral Weissert C, Dollenmaier G, Rafeiner P, Riehm J, Schultze D (2009) Burkholderia pseudomallei misidentified by automated system. Emerg Infect Dis 15(11):1799–1801CrossRefPubMedPubMedCentral
15.
go back to reference Lowe P, Haswell H, Lewis K (2006) Use of various common isolation media to evaluate the new VITEK 2 colorimetric GN card for identification of Burkholderia pseudomallei. J Clin Microbiol 44(3):854–856CrossRefPubMedPubMedCentral Lowe P, Haswell H, Lewis K (2006) Use of various common isolation media to evaluate the new VITEK 2 colorimetric GN card for identification of Burkholderia pseudomallei. J Clin Microbiol 44(3):854–856CrossRefPubMedPubMedCentral
16.
go back to reference Suttisunhakul V, Pumpuang A, Ekchariyawat P et al (2017) Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of Burkholderia pseudomallei from Asia and Australia and differentiation between Burkholderia species. PLoS One 12(4):e0175294CrossRefPubMedPubMedCentral Suttisunhakul V, Pumpuang A, Ekchariyawat P et al (2017) Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of Burkholderia pseudomallei from Asia and Australia and differentiation between Burkholderia species. PLoS One 12(4):e0175294CrossRefPubMedPubMedCentral
17.
go back to reference Lau SK, Sridhar S, Ho CC et al (2015) Laboratory diagnosis of melioidosis: past, present and future. Exp Biol Med (Maywood) 240(6):742–751CrossRef Lau SK, Sridhar S, Ho CC et al (2015) Laboratory diagnosis of melioidosis: past, present and future. Exp Biol Med (Maywood) 240(6):742–751CrossRef
18.
go back to reference Fang H, Ohlsson AK, Ullberg M, Ozenci V (2012) Evaluation of species-specific PCR, Bruker MS, VITEK MS and the VITEK 2 system for the identification of clinical enterococcus isolates. Eur J Clin Microbiol Infect Dis 31(11):3073–3077CrossRefPubMed Fang H, Ohlsson AK, Ullberg M, Ozenci V (2012) Evaluation of species-specific PCR, Bruker MS, VITEK MS and the VITEK 2 system for the identification of clinical enterococcus isolates. Eur J Clin Microbiol Infect Dis 31(11):3073–3077CrossRefPubMed
19.
go back to reference Lowe CW, Satterfield BA, Nelson DB et al (2016) A Quadruplex real-time PCR assay for the rapid detection and differentiation of the most relevant members of the B. pseudomallei complex: B. mallei, B. pseudomallei, and B. thailandensis. PLoS One 11(10):e0164006CrossRefPubMedPubMedCentral Lowe CW, Satterfield BA, Nelson DB et al (2016) A Quadruplex real-time PCR assay for the rapid detection and differentiation of the most relevant members of the B. pseudomallei complex: B. mallei, B. pseudomallei, and B. thailandensis. PLoS One 11(10):e0164006CrossRefPubMedPubMedCentral
20.
go back to reference Wattal C, Oberoi JK, Goel N, Raveendran R, Khanna S (2017) Matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS) for rapid identification of micro-organisms in the routine clinical microbiology laboratory. Eur J Clin Microbiol Infect Dis 36(5):807–812CrossRefPubMed Wattal C, Oberoi JK, Goel N, Raveendran R, Khanna S (2017) Matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS) for rapid identification of micro-organisms in the routine clinical microbiology laboratory. Eur J Clin Microbiol Infect Dis 36(5):807–812CrossRefPubMed
21.
go back to reference Li X, Tang Y, Lu X (2018) Insight into identification of Acinetobacter species by matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) in the clinical laboratory. J Am Soc Mass Spectrom 29(7):1546–1553CrossRefPubMed Li X, Tang Y, Lu X (2018) Insight into identification of Acinetobacter species by matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) in the clinical laboratory. J Am Soc Mass Spectrom 29(7):1546–1553CrossRefPubMed
23.
go back to reference Luo L, Liu W, Li B et al (2016) Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of Mycobacterium abscessus subspecies according to whole-genome sequencing. J Clin Microbiol 54(12):2982–2989CrossRefPubMedPubMedCentral Luo L, Liu W, Li B et al (2016) Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of Mycobacterium abscessus subspecies according to whole-genome sequencing. J Clin Microbiol 54(12):2982–2989CrossRefPubMedPubMedCentral
24.
go back to reference Buckwalter SP, Olson SL, Connelly BJ et al (2016) Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of Mycobacterium species, Nocardia species, and other Aerobic Actinomycetes. J Clin Microbiol 54(2):376–384CrossRefPubMedPubMedCentral Buckwalter SP, Olson SL, Connelly BJ et al (2016) Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of Mycobacterium species, Nocardia species, and other Aerobic Actinomycetes. J Clin Microbiol 54(2):376–384CrossRefPubMedPubMedCentral
Metadata
Title
Evaluation of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for identifying Burkholderia pseudomallei and Burkholderia thailandensis isolates
Authors
Jin Li
Weiwei Hu
Fengling Zhang
Min Li
Chenglong Rao
Weiping Lu
Publication date
01-01-2019
Publisher
Springer Berlin Heidelberg
Published in
European Journal of Clinical Microbiology & Infectious Diseases / Issue 1/2019
Print ISSN: 0934-9723
Electronic ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-018-3415-3

Other articles of this Issue 1/2019

European Journal of Clinical Microbiology & Infectious Diseases 1/2019 Go to the issue