Skip to main content
Top
Published in: European Journal of Clinical Microbiology & Infectious Diseases 2/2017

01-02-2017 | Original Article

Spread and exchange of bla NDM-1 in hospitalized neonates: role of mobilizable genetic elements

Authors: S. Datta, S. Mitra, P. Chattopadhyay, T. Som, S. Mukherjee, S. Basu

Published in: European Journal of Clinical Microbiology & Infectious Diseases | Issue 2/2017

Login to get access

Abstract

To investigate the mobilizable elements associated with bla NDM-1 in Enterobacteriaceae isolated from septicaemic neonates at a NICU in India, during December, 2008–2011. An attempt was also made to understand whether there was a pattern in the temporal acquisition of bla NDM-1 within the unit. Transferability of carbapenem resistance was tested by conjugation and transformation. Plasmid types and addiction systems were analysed. The genetic background of bla NDM-1 and association with class 1 integron were evaluated by PCR mapping. RFLP was carried out to discriminate plasmids of same incompatibility group. Transfer of carbapenem resistance was successful in 13/15 cases. bla NDM-1 was associated with different plasmid scaffolds (IncFII, IncL/M, IncN, IncR, IncHIB-M/FIB-M), IncF type being the prevalent one. Addiction systems ccdAB and hok/sok were associated with transferable plasmids. Genetic structures surrounding bla NDM-1 showed its association with at least a remnant of ISAba125 at its 5′-end. The spread of NDM-1 was not related to class 1 integron which possessed resistance determinants against trimethoprim (dfrA12, dfrA1, dfrA5), streptomycin (aadA2, aacA4), and rifampicin (arr-3). RFLP showed that three isolates possessed the same FII/FIIs plasmid; two of these three isolates were from a single neonate, implying interspecies transfer of bla NDM-1. The predominance of FII plasmids and ISAba125 along with bla NDM-1 was noted, but no specific pattern in the temporal acquisition of mobile genetic elements could be identified. To the best of our knowledge, this report is the first to inform the in-vivo interspecies plasmid transfer event of bla NDM-1 in a neonate.
Appendix
Available only for authorised users
Literature
2.
go back to reference Zaidi AK, Huskins WC, Thaver D, Bhutta ZA, Abbas Z, Goldmann DA (2005) Hospital-acquired neonatal infections in developing countries. Lancet 365:1175–1188CrossRefPubMed Zaidi AK, Huskins WC, Thaver D, Bhutta ZA, Abbas Z, Goldmann DA (2005) Hospital-acquired neonatal infections in developing countries. Lancet 365:1175–1188CrossRefPubMed
5.
go back to reference Sonnevend A, Al Baloushi A, Ghazawi A, Hashmey R, Girgis S, Hamadeh MB, Al Haj M, Pál T (2013) Emergence and spread of NDM-1 producer Enterobacteriaceae with contribution of IncX3 plasmids in the United Arab Emirates. J Med Microbiol 62:1044–1050. doi:10.1099/jmm.0.059014-0 CrossRefPubMed Sonnevend A, Al Baloushi A, Ghazawi A, Hashmey R, Girgis S, Hamadeh MB, Al Haj M, Pál T (2013) Emergence and spread of NDM-1 producer Enterobacteriaceae with contribution of IncX3 plasmids in the United Arab Emirates. J Med Microbiol 62:1044–1050. doi:10.​1099/​jmm.​0.​059014-0 CrossRefPubMed
6.
go back to reference Giske CG, Fröding I, Hasan CM, Turlej-Rogacka A, Toleman M, Livermore D, Woodford N, Walsh TR (2012) Diverse sequence types of Klebsiella pneumoniae contribute to the dissemination of bla NDM-1 in India, Sweden, and the United Kingdom. Antimicrob Agents Chemother 56:2735–2738. doi:10.1128/AAC.06142-11 CrossRefPubMedPubMedCentral Giske CG, Fröding I, Hasan CM, Turlej-Rogacka A, Toleman M, Livermore D, Woodford N, Walsh TR (2012) Diverse sequence types of Klebsiella pneumoniae contribute to the dissemination of bla NDM-1 in India, Sweden, and the United Kingdom. Antimicrob Agents Chemother 56:2735–2738. doi:10.​1128/​AAC.​06142-11 CrossRefPubMedPubMedCentral
8.
go back to reference Walsh TR, Weeks J, Livermore DM, Toleman MA (2011) Dissemination of NDM-1 positive bacteria in the New Delhi environment and its implications for human health: an environmental point prevalence study. Lancet Infect Dis 11:355–362. doi:10.1016/S1473-3099(11)70059-7 CrossRefPubMed Walsh TR, Weeks J, Livermore DM, Toleman MA (2011) Dissemination of NDM-1 positive bacteria in the New Delhi environment and its implications for human health: an environmental point prevalence study. Lancet Infect Dis 11:355–362. doi:10.​1016/​S1473-3099(11)70059-7 CrossRefPubMed
9.
go back to reference Day KM, Ali S, Mirza IA, Sidjabat HE, Silvey A, Lanyon CV, Cummings SP, Abbasi SA, Raza MW, Paterson DL, Perry JD (2013) Prevalence and molecular characterization of Enterobacteriaceae producing NDM-1 carbapenemase at a military hospital in Pakistan and evaluation of two chromogenic media. Diagn Microbiol Infect Dis 75:187–191CrossRefPubMed Day KM, Ali S, Mirza IA, Sidjabat HE, Silvey A, Lanyon CV, Cummings SP, Abbasi SA, Raza MW, Paterson DL, Perry JD (2013) Prevalence and molecular characterization of Enterobacteriaceae producing NDM-1 carbapenemase at a military hospital in Pakistan and evaluation of two chromogenic media. Diagn Microbiol Infect Dis 75:187–191CrossRefPubMed
10.
go back to reference Kado CI, Liu ST (1981) Rapid procedure for detection and isolation of large and small plasmids. J Bacteriol 145:1365–1373PubMedPubMedCentral Kado CI, Liu ST (1981) Rapid procedure for detection and isolation of large and small plasmids. J Bacteriol 145:1365–1373PubMedPubMedCentral
11.
go back to reference Carattoli A, Bertini A, Villa L, Falbo V, Hopkins KL, Threlfall EJ (2005) Identification of plasmids by PCR-based replicon typing. J Microbiol Methods 63:219–228CrossRefPubMed Carattoli A, Bertini A, Villa L, Falbo V, Hopkins KL, Threlfall EJ (2005) Identification of plasmids by PCR-based replicon typing. J Microbiol Methods 63:219–228CrossRefPubMed
12.
go back to reference Mnif B, Vimont S, Boyd A, Bourit E, Picard B, Branger C, Denamur E, Arlet G (2010) Molecular characterization of addiction systems of plasmids encoding extended-spectrum β-lactamases in Escherichia coli. J Antimicrob Chemother 65:1599–1603. doi:10.1093/jac/dkq181 CrossRefPubMed Mnif B, Vimont S, Boyd A, Bourit E, Picard B, Branger C, Denamur E, Arlet G (2010) Molecular characterization of addiction systems of plasmids encoding extended-spectrum β-lactamases in Escherichia coli. J Antimicrob Chemother 65:1599–1603. doi:10.​1093/​jac/​dkq181 CrossRefPubMed
13.
go back to reference Shibata N, Doi Y, Yamane K, Yagi T, Kurokawa H, Shibayama K, Kato H, Kai K, Arakawa Y (2003) PCR typing of genetic determinants for metallo-β-lactamases and integrases carried by gram negative bacteria isolated in Japan, with focus on the class 3 integron. J Clin Microbiol 41:5407–5413CrossRefPubMedPubMedCentral Shibata N, Doi Y, Yamane K, Yagi T, Kurokawa H, Shibayama K, Kato H, Kai K, Arakawa Y (2003) PCR typing of genetic determinants for metallo-β-lactamases and integrases carried by gram negative bacteria isolated in Japan, with focus on the class 3 integron. J Clin Microbiol 41:5407–5413CrossRefPubMedPubMedCentral
14.
go back to reference Martinez-Freijo P, Fluit AC, Schmitz FJ, Grek VS, Verhoef J, Jones ME (1998) Class I integrons in Gram-negative isolates from different European hospitals and association with decreased susceptibility to multiple antibiotic compounds. J Antimicrob Chemother 42:689–696CrossRefPubMed Martinez-Freijo P, Fluit AC, Schmitz FJ, Grek VS, Verhoef J, Jones ME (1998) Class I integrons in Gram-negative isolates from different European hospitals and association with decreased susceptibility to multiple antibiotic compounds. J Antimicrob Chemother 42:689–696CrossRefPubMed
18.
go back to reference Yong D, Toleman MA, Giske CG, Cho HS, Sundman K, Lee K, Walsh TR (2009) Characterization of a new metallo-β-lactamase gene, bla NDM-1, and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob Agents Chemother 53:5046–5054. doi:10.1128/AAC.00774-09 CrossRefPubMedPubMedCentral Yong D, Toleman MA, Giske CG, Cho HS, Sundman K, Lee K, Walsh TR (2009) Characterization of a new metallo-β-lactamase gene, bla NDM-1, and a novel erythromycin esterase gene carried on a unique genetic structure in Klebsiella pneumoniae sequence type 14 from India. Antimicrob Agents Chemother 53:5046–5054. doi:10.​1128/​AAC.​00774-09 CrossRefPubMedPubMedCentral
19.
go back to reference Poirel L, Lagrutta E, Taylor P, Pham J, Nordmann P (2010) Emergence of metallo-β-lactamase NDM-1-producing multidrug-resistant Escherichia coli in Australia. Antimicrob Agents Chemother 54:4914–4916CrossRefPubMedPubMedCentral Poirel L, Lagrutta E, Taylor P, Pham J, Nordmann P (2010) Emergence of metallo-β-lactamase NDM-1-producing multidrug-resistant Escherichia coli in Australia. Antimicrob Agents Chemother 54:4914–4916CrossRefPubMedPubMedCentral
21.
go back to reference Weldhagen GF (2004) Integrons and β-lactamases—a novel perspective on resistance. Int J Antimicrob Agents 23:556–562CrossRefPubMed Weldhagen GF (2004) Integrons and β-lactamases—a novel perspective on resistance. Int J Antimicrob Agents 23:556–562CrossRefPubMed
23.
25.
go back to reference Roy S, Singh AK, Viswanathan R, Nandy RK, Basu S (2011) Transmission of imipenem resistance determinants during the course of an outbreak of NDM-1 Escherichia coli in a sick newborn care unit. J Antimicrob Chemother 66(12):2773–2780. doi:10.1093/jac/dkr376 CrossRefPubMed Roy S, Singh AK, Viswanathan R, Nandy RK, Basu S (2011) Transmission of imipenem resistance determinants during the course of an outbreak of NDM-1 Escherichia coli in a sick newborn care unit. J Antimicrob Chemother 66(12):2773–2780. doi:10.​1093/​jac/​dkr376 CrossRefPubMed
Metadata
Title
Spread and exchange of bla NDM-1 in hospitalized neonates: role of mobilizable genetic elements
Authors
S. Datta
S. Mitra
P. Chattopadhyay
T. Som
S. Mukherjee
S. Basu
Publication date
01-02-2017
Publisher
Springer Berlin Heidelberg
Published in
European Journal of Clinical Microbiology & Infectious Diseases / Issue 2/2017
Print ISSN: 0934-9723
Electronic ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-016-2794-6

Other articles of this Issue 2/2017

European Journal of Clinical Microbiology & Infectious Diseases 2/2017 Go to the issue