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Published in: Archives of Virology 12/2018

01-12-2018 | Brief Report

Flanders hapavirus in western North America

Authors: Andrew J. Golnar, Stan Langevin, Nicholas A. Panella, Owen D. Solberg, William K. Reisen, Nicholas Komar

Published in: Archives of Virology | Issue 12/2018

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Abstract

Flanders virus (FLAV; family Rhabdoviridae) is a mosquito-borne hapavirus with no known pathology that is frequently isolated during arbovirus surveillance programs. Here, we document the presence of FLAV in Culex tarsalis mosquitoes and a Canada goose (Branta canadensis) collected in western North America, outside of the currently recognized range of FLAV. Until now, FLAV-like viruses detected in the western United States were assumed to be Hart Park virus (HPV, family Rhabdoviridae), a closely related congener. A re-examination of archived viral isolates revealed that FLAV was circulating in California as early as 1963. FLAV also was isolated in Nebraska, Colorado, South Dakota, North Dakota, and Saskatchewan, Canada. Phylogenetic analysis of the U1 pseudogene for 117 taxa and eight nuclear genes for 15 taxa demonstrated no distinct clustering between western FLAV isolates. Assuming the range of FLAV has been expanding west, these results indicate that FLAV likely spread west following multiple invasion events. However, it remains to be determined if the detection of FLAV in western North America is due to expansion or is a result of enhanced arbovirus surveillance or diagnostic techniques. Currently, the impact of FLAV infection remains unknown.
Literature
1.
go back to reference Whitney E (1964) Flanders strain, an arbovirus newly isolated from mosquitoes and birds of New York State. Am J Trop Med Hyg 13:123–131CrossRef Whitney E (1964) Flanders strain, an arbovirus newly isolated from mosquitoes and birds of New York State. Am J Trop Med Hyg 13:123–131CrossRef
2.
go back to reference McLean RG, Ubico SR (2007) Arboviruses in birds. In: Thomas NJ, Hunter DB, Atkinson CT (eds) Infectious diseases of wild birds. Blackwell Publishing, Hoboken, pp 17–62CrossRef McLean RG, Ubico SR (2007) Arboviruses in birds. In: Thomas NJ, Hunter DB, Atkinson CT (eds) Infectious diseases of wild birds. Blackwell Publishing, Hoboken, pp 17–62CrossRef
3.
4.
go back to reference Allison AB, Mead DG, Palacios GF, Tesh RB, Holmes EC (2014) Gene duplication and phylogeography of North American members of the Hart Park serogroup of avian rhabdoviruses. Virology 448:284–292CrossRef Allison AB, Mead DG, Palacios GF, Tesh RB, Holmes EC (2014) Gene duplication and phylogeography of North American members of the Hart Park serogroup of avian rhabdoviruses. Virology 448:284–292CrossRef
5.
go back to reference Ksiazek TG (1984) An epidemiological investigation of Hart Park and Turlock viruses in California. Ph.D. Dissertation, University of California, Berkeley Ksiazek TG (1984) An epidemiological investigation of Hart Park and Turlock viruses in California. Ph.D. Dissertation, University of California, Berkeley
6.
go back to reference Reeves WC, Asman SM, Hardy JL, Milby MM, Reisen WK (1990) Epidemiology and control of mosquito-borne arboviruses in California, 1943–1987. California Mosquito and Vector Control Association Inc, Sacramento Reeves WC, Asman SM, Hardy JL, Milby MM, Reisen WK (1990) Epidemiology and control of mosquito-borne arboviruses in California, 1943–1987. California Mosquito and Vector Control Association Inc, Sacramento
7.
go back to reference Bolling BG, Olea-Popelka FJ, Eisen L, Moore CG, Blair CD (2012) Transmission dynamics of an insect-specific flavivirus in a naturally infected Culex pipiens laboratory colony and effects of co-infection on vector competence for West Nile virus. Virology 427:90–97CrossRef Bolling BG, Olea-Popelka FJ, Eisen L, Moore CG, Blair CD (2012) Transmission dynamics of an insect-specific flavivirus in a naturally infected Culex pipiens laboratory colony and effects of co-infection on vector competence for West Nile virus. Virology 427:90–97CrossRef
8.
go back to reference Blitvich BJ, Firth AE (2015) Insect-specific flaviviruses: a systematic review of their discovery, host range, mode of transmission, superinfection exclusion potential and genomic organization. Viruses 7:1927–1959CrossRef Blitvich BJ, Firth AE (2015) Insect-specific flaviviruses: a systematic review of their discovery, host range, mode of transmission, superinfection exclusion potential and genomic organization. Viruses 7:1927–1959CrossRef
9.
go back to reference Komar N, Panella NA, Burkhalter KL (2018) Focal amplification and suppression of West Nile virus transmission associated with communal bird roosts in Northern Colorado. J Vect Ecol 43(2) (In press) Komar N, Panella NA, Burkhalter KL (2018) Focal amplification and suppression of West Nile virus transmission associated with communal bird roosts in Northern Colorado. J Vect Ecol 43(2) (In press)
10.
go back to reference Lanciotti RS, Kerst AJ, Nasci RS, Godsey MS, Mitchell CJ et al (2000) Rapid detection of West Nile virus from human clinical specimens, field-collected mosquitoes, and avian samples by a TaqMan reverse transcriptase-PCR assay. J Clin Microbiol 38:4066–4071PubMedPubMedCentral Lanciotti RS, Kerst AJ, Nasci RS, Godsey MS, Mitchell CJ et al (2000) Rapid detection of West Nile virus from human clinical specimens, field-collected mosquitoes, and avian samples by a TaqMan reverse transcriptase-PCR assay. J Clin Microbiol 38:4066–4071PubMedPubMedCentral
11.
go back to reference Langevin SA, Bent ZW, Solberg OD, Curtis DJ, Lane PD et al (2013) Peregrine: a rapid and unbiased method to produce strand-specific RNA-Seq libraries from small quantities of starting material. RNA Biol 10:502–515CrossRef Langevin SA, Bent ZW, Solberg OD, Curtis DJ, Lane PD et al (2013) Peregrine: a rapid and unbiased method to produce strand-specific RNA-Seq libraries from small quantities of starting material. RNA Biol 10:502–515CrossRef
12.
go back to reference Pauvolid-Correa A, Solberg OD, Couto-Lima D, Kenny J, Serra-Freire N et al (2015) Nhumirim virus, a novel flavivirus isolated from mosquitoes from the Pantanal, Brazil. Arch Virol 160:21–27CrossRef Pauvolid-Correa A, Solberg OD, Couto-Lima D, Kenny J, Serra-Freire N et al (2015) Nhumirim virus, a novel flavivirus isolated from mosquitoes from the Pantanal, Brazil. Arch Virol 160:21–27CrossRef
13.
go back to reference Katoh K, Asimenos G, Toh H (2009) Multiple alignment of DNA sequences with MAFFT. In: Posada D (ed) Bioinformatics for DNA sequence analysis. Humana Press, New York, pp 39–64CrossRef Katoh K, Asimenos G, Toh H (2009) Multiple alignment of DNA sequences with MAFFT. In: Posada D (ed) Bioinformatics for DNA sequence analysis. Humana Press, New York, pp 39–64CrossRef
14.
go back to reference Lanfear R, Calcott B, Ho SY, Guindon S (2012) PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol Biol Evol 29:1695–1701CrossRef Lanfear R, Calcott B, Ho SY, Guindon S (2012) PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Mol Biol Evol 29:1695–1701CrossRef
15.
go back to reference Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574CrossRef Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574CrossRef
16.
go back to reference Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30(9):1312–1313CrossRef Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30(9):1312–1313CrossRef
17.
go back to reference Hall R, McKiel J, McLintock J, Burton A (1969) Arboviruses from Saskatchewan mosquitoes—isolation of a member of the Flanders–Hart Park group and of a strain as yet unidentified. Can J Public Health/Revue Canadienne de Sante’e Publique 60:486–488 Hall R, McKiel J, McLintock J, Burton A (1969) Arboviruses from Saskatchewan mosquitoes—isolation of a member of the Flanders–Hart Park group and of a strain as yet unidentified. Can J Public Health/Revue Canadienne de Sante’e Publique 60:486–488
18.
go back to reference Rowley W, Hunt A, Dorsey D (1983) Flanders virus activity in Iowa, USA. J Med Entomol 20(4):409–413CrossRef Rowley W, Hunt A, Dorsey D (1983) Flanders virus activity in Iowa, USA. J Med Entomol 20(4):409–413CrossRef
19.
go back to reference Kokernot RH, Hayes J, Boyd KR, Sullivan PS (1974) Arbovirus studies in Houston, Texas, 1968–1970. J Med Entomol 11(4):419–425CrossRef Kokernot RH, Hayes J, Boyd KR, Sullivan PS (1974) Arbovirus studies in Houston, Texas, 1968–1970. J Med Entomol 11(4):419–425CrossRef
20.
go back to reference Holden P, Hayes RO, Mitchell CJ, Francy DB, Lazuick JS, Hughes TB (1973) House sparrows, Passer domesticus (L.), as hosts of arboviruses in Hale County, Texas: I. Field studies, 1965–1969. Am J Trop Med Hyg 22(2):244–253CrossRef Holden P, Hayes RO, Mitchell CJ, Francy DB, Lazuick JS, Hughes TB (1973) House sparrows, Passer domesticus (L.), as hosts of arboviruses in Hale County, Texas: I. Field studies, 1965–1969. Am J Trop Med Hyg 22(2):244–253CrossRef
21.
go back to reference Takeda T, Whitehouse CA, Brewer M, Gettman AD, Mather TN (2003) Arbovirus surveillance in Rhode Island: assessing potential ecologic and climatic correlates. J Am Mosq Control Assoc 19(3):179–189PubMed Takeda T, Whitehouse CA, Brewer M, Gettman AD, Mather TN (2003) Arbovirus surveillance in Rhode Island: assessing potential ecologic and climatic correlates. J Am Mosq Control Assoc 19(3):179–189PubMed
22.
go back to reference Nasci RS, White DJ, Stirling H, Oliver J, Daniels TJ, Falco RC et al (2001) West Nile virus isolates from mosquitoes in New York and New Jersey, 1999. Emerg Infect Dis 7(4):626CrossRef Nasci RS, White DJ, Stirling H, Oliver J, Daniels TJ, Falco RC et al (2001) West Nile virus isolates from mosquitoes in New York and New Jersey, 1999. Emerg Infect Dis 7(4):626CrossRef
23.
go back to reference Sudia WD, Newhouse V, Calisher C (1975) Arbovirus vector ecology studies in Mexico during the 1972 Venezuelan equine encephalitis outbreak. Am J Epidemiol 101(1):51–58CrossRef Sudia WD, Newhouse V, Calisher C (1975) Arbovirus vector ecology studies in Mexico during the 1972 Venezuelan equine encephalitis outbreak. Am J Epidemiol 101(1):51–58CrossRef
24.
go back to reference Belloncik S, Poulin L, Maire A, Aubin A, Fauvel M, Jousset FX (1982) Activity of California encephalitis group viruses in Entrelacs (province of Quebec, Canada). Can J Microbiol 28(6):572–579CrossRef Belloncik S, Poulin L, Maire A, Aubin A, Fauvel M, Jousset FX (1982) Activity of California encephalitis group viruses in Entrelacs (province of Quebec, Canada). Can J Microbiol 28(6):572–579CrossRef
25.
go back to reference Thorsen J, Artsob H, Spence L, Surgeoner G, Helson B, Wright R (1980) Virus isolations from mosquitoes in southern Ontario, 1976 and 1977. Can J Microbiol 26(4):436–440CrossRef Thorsen J, Artsob H, Spence L, Surgeoner G, Helson B, Wright R (1980) Virus isolations from mosquitoes in southern Ontario, 1976 and 1977. Can J Microbiol 26(4):436–440CrossRef
26.
go back to reference McLean RG, Frier G, Parham GL, Francy DB, Monath TP, Campos EG et al (1985) Investigations of the vertebrate hosts of eastern equine encephalitis during an epizootic in Michigan, 1980. Am J Trop Med Hyg 34(6):1190–1202CrossRef McLean RG, Frier G, Parham GL, Francy DB, Monath TP, Campos EG et al (1985) Investigations of the vertebrate hosts of eastern equine encephalitis during an epizootic in Michigan, 1980. Am J Trop Med Hyg 34(6):1190–1202CrossRef
27.
go back to reference Wozniak A, Dowda HE, Tolson MW, Karabatsos N, Vaughan DR, Turner PE et al (2001) Arbovirus surveillance in South Carolina, 1996–98. J Am Mosq Control Assoc 17(1):73–78PubMed Wozniak A, Dowda HE, Tolson MW, Karabatsos N, Vaughan DR, Turner PE et al (2001) Arbovirus surveillance in South Carolina, 1996–98. J Am Mosq Control Assoc 17(1):73–78PubMed
28.
go back to reference Wills W, Pidcoe V, Carroll DF, Satz JE (1974) Isolation of California group arboviruses from Pennsylvania mosquitoes-1971, 1972. Mosq News 34:376–381 Wills W, Pidcoe V, Carroll DF, Satz JE (1974) Isolation of California group arboviruses from Pennsylvania mosquitoes-1971, 1972. Mosq News 34:376–381
29.
go back to reference Crane GT, Elbel RE, Klimstra DE, Smart KL (1970) Arbovirus isolations from mosquitoes collected in central Utah in 1967. Am J Trop Med Hyg 3:540–543CrossRef Crane GT, Elbel RE, Klimstra DE, Smart KL (1970) Arbovirus isolations from mosquitoes collected in central Utah in 1967. Am J Trop Med Hyg 3:540–543CrossRef
30.
go back to reference Emmons RW, Milby MM, Gillies PA, Reeves WC, Bayer EV (1981) Surveillance for arthropod-borne viral activity and disease in California during 1980. Proc Calif Mosq Vector Control Assoc, pp 1–4 Emmons RW, Milby MM, Gillies PA, Reeves WC, Bayer EV (1981) Surveillance for arthropod-borne viral activity and disease in California during 1980. Proc Calif Mosq Vector Control Assoc, pp 1–4
31.
go back to reference Emmons RW, Milby MM, Gillies PA, Reeves WC, Bayer EV (1982) Surveillance for arthropod-borne viral activity and disease in California during 1981. Proc Calif Mosq Vector Control Assoc, pp 20–38 Emmons RW, Milby MM, Gillies PA, Reeves WC, Bayer EV (1982) Surveillance for arthropod-borne viral activity and disease in California during 1981. Proc Calif Mosq Vector Control Assoc, pp 20–38
32.
go back to reference Emmons RW, Milby MM, Gillies PA, Reeves WC, Bayer EV et al (1983) Surveillance for arthropod-borne viral activity and disease in California during 1982. Proc Calif Mosq Vector Control Assoc, pp 6–17 Emmons RW, Milby MM, Gillies PA, Reeves WC, Bayer EV et al (1983) Surveillance for arthropod-borne viral activity and disease in California during 1982. Proc Calif Mosq Vector Control Assoc, pp 6–17
Metadata
Title
Flanders hapavirus in western North America
Authors
Andrew J. Golnar
Stan Langevin
Nicholas A. Panella
Owen D. Solberg
William K. Reisen
Nicholas Komar
Publication date
01-12-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 12/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-4003-7

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