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Published in: Archives of Virology 10/2018

01-10-2018 | Annotated Sequence Record

Gomphocarpus mosaic virus, a distinctive member of the genus Potyvirus

Published in: Archives of Virology | Issue 10/2018

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Abstract

Plants of the species Gomphocarpus physocarpus, commonly known as balloon plant or swan plant, exhibiting virus-like symptoms of mosaic, mottle and crinkling were observed and collected in the southwestern part of Taiwan in 2015. Electron microscopic examination showed the presence of virus-like flexuous-rod particles. Potyvirus pinwheel-shape and laminated inclusion bodies were observed in the preparations of ultrathin sections of diseased leaves. The complete genome sequence of the potyvirus of balloon plant was determined. It is 9998 nucleotides in length, excluding the 3′-terminal poly(A) tail. It contains two open reading frames encoding a polyprotein of 3196 amino acids and a PIPO protein of 89 amino acids. The polyprotein gene shares 52.8-68.4% nucleotide sequence identity and 40.2-75.8% amino acid sequence identity with other potyviruses tested. Molecular analysis indicates that the virus is most closely related to but distinct from keunjorong mosaic virus (KjMV). The virus causing mosaic, mottle and crinkling on Gomphocarpus plants (gomphocarpus mosaic virus, GoMV) likely belongs to a new species of the genus Potyvirus.
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Literature
1.
go back to reference Adams MJ, Antoniw JF, Fauquet CM (2005) Molecular criteria for genus and species discrimination within the family Potyviridae. Arch Virol 150:459–479CrossRefPubMed Adams MJ, Antoniw JF, Fauquet CM (2005) Molecular criteria for genus and species discrimination within the family Potyviridae. Arch Virol 150:459–479CrossRefPubMed
2.
go back to reference Adams MJ, Antoniw JF, Beaudoin F (2005) Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol Plant Pathol 6:471–487CrossRefPubMed Adams MJ, Antoniw JF, Beaudoin F (2005) Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol Plant Pathol 6:471–487CrossRefPubMed
3.
go back to reference Adams MJ, Zerbini FM, French R, Rabenstein F, Stenger DC, Valkonen JPT (2012) Family Potyviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (ed) Virus taxonomy. In: Ninth report of the International Committee for Taxonomy of Viruses, Elsevier Academic Press, pp 1069–1089 Adams MJ, Zerbini FM, French R, Rabenstein F, Stenger DC, Valkonen JPT (2012) Family Potyviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (ed) Virus taxonomy. In: Ninth report of the International Committee for Taxonomy of Viruses, Elsevier Academic Press, pp 1069–1089
4.
go back to reference Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410CrossRefPubMed Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410CrossRefPubMed
5.
go back to reference Bellardi MG, Lisa V (1998) Aggiornamento sulle virosi delle piante ornamentali in Italia. In: Atti Giornate Fitopatologiche 1998. Scicli and Ragusa, Italy, 3–7 May 1998, pp 747–768 Bellardi MG, Lisa V (1998) Aggiornamento sulle virosi delle piante ornamentali in Italia. In: Atti Giornate Fitopatologiche 1998. Scicli and Ragusa, Italy, 3–7 May 1998, pp 747–768
6.
go back to reference Bertaccini A, Bellardi MG, Botti S, Paltrinieri S, Restuccia P (2006) Phytoplasma infection in Asclepias physocarpa. Acta Hortic 722:349–354CrossRef Bertaccini A, Bellardi MG, Botti S, Paltrinieri S, Restuccia P (2006) Phytoplasma infection in Asclepias physocarpa. Acta Hortic 722:349–354CrossRef
7.
go back to reference Chung BY, Miller WA, Atkins JF, Firth AE (2008) An overlapping essential gene in the Potyviridae. Proc Natl Acad Sci USA 105:5897–5902CrossRefPubMed Chung BY, Miller WA, Atkins JF, Firth AE (2008) An overlapping essential gene in the Potyviridae. Proc Natl Acad Sci USA 105:5897–5902CrossRefPubMed
8.
go back to reference Edwardson JR, Christie RG (1991) CRC handbook of viruses infecting legumes. CRC Press, New York Edwardson JR, Christie RG (1991) CRC handbook of viruses infecting legumes. CRC Press, New York
9.
go back to reference Elliott MS, Massey B, Cui X, Hiebert E, Charudattan R, Waipara N, Hayes L (2009) Supplemental host range of Araujia mosaic virus, a potential biological control agent of moth plant in New Zealand. Aust Plant Pathol 38:603–607CrossRef Elliott MS, Massey B, Cui X, Hiebert E, Charudattan R, Waipara N, Hayes L (2009) Supplemental host range of Araujia mosaic virus, a potential biological control agent of moth plant in New Zealand. Aust Plant Pathol 38:603–607CrossRef
10.
go back to reference Gal-On A (2000) A point mutation in the FRNK motif of the potyvirus helper component-protease gene alters symptom expression in cucurbits and elicits protection against the severe homologous virus. Phytopathology 90:467–473CrossRefPubMed Gal-On A (2000) A point mutation in the FRNK motif of the potyvirus helper component-protease gene alters symptom expression in cucurbits and elicits protection against the severe homologous virus. Phytopathology 90:467–473CrossRefPubMed
11.
go back to reference Greber RS (1971) Some characteristics of tobacco streak virus isolated in Queensland. Qld J Agric Anim Sci 28:105 Greber RS (1971) Some characteristics of tobacco streak virus isolated in Queensland. Qld J Agric Anim Sci 28:105
12.
go back to reference Hsu YC, Yeh TJ, Chang YC (2005) A new combination of RT-PCR and reverse dot blot hybridization for rapid detection and identification of potyviruses. J Virol Methods 128:54–60CrossRefPubMed Hsu YC, Yeh TJ, Chang YC (2005) A new combination of RT-PCR and reverse dot blot hybridization for rapid detection and identification of potyviruses. J Virol Methods 128:54–60CrossRefPubMed
13.
go back to reference Maciel SC, Silva RF, Reis MS, Jadão AS, Rosa DD, Giampan JS, Kitajima EW, Rezende JAM, Camargo LE (2011) Characterization of a new potyvirus causing mosaic and flower variegation in Catharanthus roseus in Brazil. Sci Agric 68:687–690CrossRef Maciel SC, Silva RF, Reis MS, Jadão AS, Rosa DD, Giampan JS, Kitajima EW, Rezende JAM, Camargo LE (2011) Characterization of a new potyvirus causing mosaic and flower variegation in Catharanthus roseus in Brazil. Sci Agric 68:687–690CrossRef
14.
go back to reference Miglino R, Druffel KL, Pappu HR (2010) Identification and molecular characterization of a new potyvirus infecting Triteleia species. Arch Virol 155:441–443CrossRefPubMed Miglino R, Druffel KL, Pappu HR (2010) Identification and molecular characterization of a new potyvirus infecting Triteleia species. Arch Virol 155:441–443CrossRefPubMed
15.
go back to reference Nam M, Lee JH, Choi HS, Lim HS, Moon JS, Lee SH (2013) Complete genome sequence of keunjorong mosaic virus, a potyvirus from Cynanchum wilfordii. Arch Virol 158:1817–1820CrossRefPubMed Nam M, Lee JH, Choi HS, Lim HS, Moon JS, Lee SH (2013) Complete genome sequence of keunjorong mosaic virus, a potyvirus from Cynanchum wilfordii. Arch Virol 158:1817–1820CrossRefPubMed
16.
go back to reference Puurand U, Makinen K, Paulin L, Saarma M (1994) The nucleotide sequence of potato virus A genomic RNA and its sequences similarities with other potyviruses. J Gen Virol 75:457–461CrossRefPubMed Puurand U, Makinen K, Paulin L, Saarma M (1994) The nucleotide sequence of potato virus A genomic RNA and its sequences similarities with other potyviruses. J Gen Virol 75:457–461CrossRefPubMed
17.
go back to reference Singh M, Singh RP (1996) Nucleotide sequence and genome organization of a Canadian isolate of the common strain of potato virus Y (PVY). Can J Plant Pathol 18:209–224CrossRef Singh M, Singh RP (1996) Nucleotide sequence and genome organization of a Canadian isolate of the common strain of potato virus Y (PVY). Can J Plant Pathol 18:209–224CrossRef
18.
go back to reference Turpen T (1989) Molecular cloning of a potato virus Y genome: nucleotide sequence homology in non-coding regions of potyviruses. J Gen Virol 70:1951–1960CrossRefPubMed Turpen T (1989) Molecular cloning of a potato virus Y genome: nucleotide sequence homology in non-coding regions of potyviruses. J Gen Virol 70:1951–1960CrossRefPubMed
19.
go back to reference Urcuqui-Inchima S, Haenni AL, Bernadi F (2001) Potyvirus proteins: a wealth of functions. Virus Res 74:157–175CrossRefPubMed Urcuqui-Inchima S, Haenni AL, Bernadi F (2001) Potyvirus proteins: a wealth of functions. Virus Res 74:157–175CrossRefPubMed
20.
go back to reference Weintraub M, Ragetli HW (1970) Distribution of virus like particles in leaf cells of Dianthus barbatus infected with carnation vein mottle virus. Virology 40:868–881CrossRefPubMed Weintraub M, Ragetli HW (1970) Distribution of virus like particles in leaf cells of Dianthus barbatus infected with carnation vein mottle virus. Virology 40:868–881CrossRefPubMed
21.
go back to reference Wylie SJ, Adams MJ, Chalam C, Kreuze J, López-Moya JJ, Ohshima K, Praveen S, Rabenstein F, Stenger D, Wang A, Zerbini FM (2017) ICTV virus taxonomy profile: Potyviridae. J Gen Virol 98:352–354CrossRefPubMedPubMedCentral Wylie SJ, Adams MJ, Chalam C, Kreuze J, López-Moya JJ, Ohshima K, Praveen S, Rabenstein F, Stenger D, Wang A, Zerbini FM (2017) ICTV virus taxonomy profile: Potyviridae. J Gen Virol 98:352–354CrossRefPubMedPubMedCentral
22.
go back to reference Dl Xu, Liu HY, Kolis ST, Li F, Li R (2010) Biological characterization and complete genomic sequence of Apium virus Y infecting celery. Virus Res 156:917–920 Dl Xu, Liu HY, Kolis ST, Li F, Li R (2010) Biological characterization and complete genomic sequence of Apium virus Y infecting celery. Virus Res 156:917–920
Metadata
Title
Gomphocarpus mosaic virus, a distinctive member of the genus Potyvirus
Publication date
01-10-2018
Published in
Archives of Virology / Issue 10/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-3940-5

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