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Published in: Archives of Virology 8/2018

01-08-2018 | Annotated Sequence Record

Sequencing, genome analysis and host range of a novel Ralstonia phage, RsoP1EGY, isolated in Egypt

Authors: Abdelmonim Ali Ahmad, Kamel M. Elhalag, Hardian Susilo Addy, Mohamed A. Nasr-Eldin, Ahmed S. Hussien, Qi Huang

Published in: Archives of Virology | Issue 8/2018

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Abstract

A novel Ralstonia phage was isolated from soil in Egypt. It was designated Ralstonia phage RsoP1EGY using our phage identifier naming approach to reflect the phage’s bacterial host species, characteristics and origin. When tested, this phage specifically infected only race 3 biovar 2 phylotype IIB sequevar 1, and not non-race 3 biovar 2 strains of Ralstonia solanacearum. The phage has an icosahedral capsid of 60 ± 5 nm in diameter with a short tail of 15 ± 5 nm in length, typical of a podovirus. The genome of RsoP1EGY is 41,297 bp in size, containing 50 open reading frames, with no significant sequence identity to any other reported R. solanacearum or non-Ralstonia phages, except to the recently deposited but unreported and unclassified Ralstonia phage DU_RP_I. RsoP1EGY is the first sequenced and characterized R. solanacearum phage isolated in Egypt.
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Metadata
Title
Sequencing, genome analysis and host range of a novel Ralstonia phage, RsoP1EGY, isolated in Egypt
Authors
Abdelmonim Ali Ahmad
Kamel M. Elhalag
Hardian Susilo Addy
Mohamed A. Nasr-Eldin
Ahmed S. Hussien
Qi Huang
Publication date
01-08-2018
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 8/2018
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-018-3844-4

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