Skip to main content
Top
Published in: Archives of Virology 10/2016

01-10-2016 | Brief Report

Whole genomic characterization of Korean porcine G8P[7] reassortant rotaviruses

Authors: Jun-Gyu Park, Sang-Ik Park, Nam-Il Woo, Deok-Song Kim, Ja-Young Seo, Mia Madel Alfajaro, Ji-Yun Kim, Mahmoud Soliman, Yeong-Bin Baek, Eun-Hyo Cho, Joseph Kwon, Jong-Soon Choi, Mun-Il Kang, Jelle Matthijnssens, Kyoung-Oh Cho

Published in: Archives of Virology | Issue 10/2016

Login to get access

Abstract

This study analyzed eleven genomic segments of three Korean porcine G8P[7] group A rotavirus (RVA) strains. Phylogenetically, these strains contained two bovine-like and nine porcine-like genomic segments. Eight genes (VP1, VP2, VP6 and NSP1-NSP5) of strains 156-1 and 42-1 and seven genes (VP1, VP2, VP6 and NSP2-NSP5) of strain C-1 clustered closely with porcine and porcine-like animal strains and distantly from typical human Wa-like strains. The VP3-M2 genotype of these strains clustered closely with bovine-like strains, but distantly with typical human DS-1-like strains. These data indicate that multiple reassortments involving porcine and bovine RVA strains in Korea must have occurred.
Appendix
Available only for authorised users
Literature
1.
go back to reference Estes MK, Greenberg HB (2013) Rotaviruses. In: Knipe DM, Howley PM, Cohen JI, Griffin DE, Lamb RA, Martin MA, Racaniello VR, Roizman B (eds) Fields virology, 6th edn. Lippincott Williams & Wilkins, Philadelphia, pp 1347–1401 Estes MK, Greenberg HB (2013) Rotaviruses. In: Knipe DM, Howley PM, Cohen JI, Griffin DE, Lamb RA, Martin MA, Racaniello VR, Roizman B (eds) Fields virology, 6th edn. Lippincott Williams & Wilkins, Philadelphia, pp 1347–1401
2.
go back to reference Dhama K, Chauhan RS, Mahendran M, Malik SVS (2009) Rotavirus diarrhea in bovines and other domestic animals. Vet Res Commun 33:1–23CrossRefPubMed Dhama K, Chauhan RS, Mahendran M, Malik SVS (2009) Rotavirus diarrhea in bovines and other domestic animals. Vet Res Commun 33:1–23CrossRefPubMed
3.
go back to reference Martella V, Banyai K, Matthijnssens J, Buonavoglia C, Ciarlet M (2010) Zoonotic aspects of rotaviruses. Vet Microbiol 140:246–255CrossRefPubMed Martella V, Banyai K, Matthijnssens J, Buonavoglia C, Ciarlet M (2010) Zoonotic aspects of rotaviruses. Vet Microbiol 140:246–255CrossRefPubMed
4.
go back to reference Theuns S, Heylen E, Zeller M, Roukaerts ID, Desmarets LM, Van Ranst M, Nauwynck HJ, Matthijnssens J (2015) Complete genome characterization of recent and ancient Belgian pig group A rotaviruses and assessment of their evolutionary relationship with human rotaviruses. J Virol 89:1043–1057CrossRefPubMed Theuns S, Heylen E, Zeller M, Roukaerts ID, Desmarets LM, Van Ranst M, Nauwynck HJ, Matthijnssens J (2015) Complete genome characterization of recent and ancient Belgian pig group A rotaviruses and assessment of their evolutionary relationship with human rotaviruses. J Virol 89:1043–1057CrossRefPubMed
5.
go back to reference Kim HJ, Park SI, Ha TP, Jeong YJ, Kim HH, Kwon HJ, Kang MI, Cho KO, Park SJ (2010) Detection and genotyping of Korean porcine rotaviruses. Vet Microbiol 144:274–286CrossRefPubMed Kim HJ, Park SI, Ha TP, Jeong YJ, Kim HH, Kwon HJ, Kang MI, Cho KO, Park SJ (2010) Detection and genotyping of Korean porcine rotaviruses. Vet Microbiol 144:274–286CrossRefPubMed
6.
go back to reference Matthijnssens J, Ciarlet M, Rahman M, Attoui H, Banyai K, Estes MK, Gentsch JR, Iturriza-Gomara M, Kirkwood CD, Martella V, Mertens PP, Nakagomi O, Patton JT, Ruggeri FM, Saif LJ, Santos N, Steyer A, Taniguchi K, Desselberger U, Van Ranst M (2008) Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments. Arch Virol 153:1621–1629CrossRefPubMedPubMedCentral Matthijnssens J, Ciarlet M, Rahman M, Attoui H, Banyai K, Estes MK, Gentsch JR, Iturriza-Gomara M, Kirkwood CD, Martella V, Mertens PP, Nakagomi O, Patton JT, Ruggeri FM, Saif LJ, Santos N, Steyer A, Taniguchi K, Desselberger U, Van Ranst M (2008) Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments. Arch Virol 153:1621–1629CrossRefPubMedPubMedCentral
7.
go back to reference Papp H, Laszlo B, Jakab F, Ganesh B, De Grazia S, Matthijnssens J, Ciarlet M, Martella V, Banyai K (2013) Review of group A rotavirus strains reported in swine and cattle. Vet Microbiol 165:190–199CrossRefPubMed Papp H, Laszlo B, Jakab F, Ganesh B, De Grazia S, Matthijnssens J, Ciarlet M, Martella V, Banyai K (2013) Review of group A rotavirus strains reported in swine and cattle. Vet Microbiol 165:190–199CrossRefPubMed
8.
go back to reference Park JG, Kim HJ, Matthijnssens J, Alfajaro MM, Kim DS, Son KY, Kwon HJ, Hosmillo M, Ryu EH, Kim JY, Cena RB, Lee JH, Kang MI, Park SI, Cho KO (2013) Different virulence of porcine and porcine-like bovine rotavirus strains with genetically nearly identical genomes in piglets and calves. Vet Res 44:88CrossRefPubMedPubMedCentral Park JG, Kim HJ, Matthijnssens J, Alfajaro MM, Kim DS, Son KY, Kwon HJ, Hosmillo M, Ryu EH, Kim JY, Cena RB, Lee JH, Kang MI, Park SI, Cho KO (2013) Different virulence of porcine and porcine-like bovine rotavirus strains with genetically nearly identical genomes in piglets and calves. Vet Res 44:88CrossRefPubMedPubMedCentral
9.
10.
go back to reference Park JG, Kim DS, Matthijnssens J, Kwon HJ, Zeller M, Alfajaro MM, Son KY, Hosmillo M, Ryu EH, Kim JY, Lee JH, Park SJ, Kang MI, Kwon J, Choi JS, Cho KO (2014) Comparison of pathogenicities and nucleotide changes between porcine and bovine reassortant rotavirus strains possessing the same genotype constellation in piglets and calves. Vet Microbiol 172:51–62CrossRefPubMed Park JG, Kim DS, Matthijnssens J, Kwon HJ, Zeller M, Alfajaro MM, Son KY, Hosmillo M, Ryu EH, Kim JY, Lee JH, Park SJ, Kang MI, Kwon J, Choi JS, Cho KO (2014) Comparison of pathogenicities and nucleotide changes between porcine and bovine reassortant rotavirus strains possessing the same genotype constellation in piglets and calves. Vet Microbiol 172:51–62CrossRefPubMed
11.
go back to reference Park SI, Matthijnssens J, Saif LJ, Kim HJ, Park JG, Alfajaro MM, Kim DS, Son KY, Yang DK, Hyun BH, Kang MI, Cho KO (2011) Reassortment among bovine, porcine and human rotavirus strains results in G8P[7] and G6P[7] strains isolated from cattle in South Korea. Vet Microbiol 152:55–66CrossRefPubMed Park SI, Matthijnssens J, Saif LJ, Kim HJ, Park JG, Alfajaro MM, Kim DS, Son KY, Yang DK, Hyun BH, Kang MI, Cho KO (2011) Reassortment among bovine, porcine and human rotavirus strains results in G8P[7] and G6P[7] strains isolated from cattle in South Korea. Vet Microbiol 152:55–66CrossRefPubMed
12.
go back to reference Kim HH, Park JG, Matthijnssens J, Kim HJ, Kwon HJ, Son KY, Ryu EH, Kim DS, Lee WS, Kang MI, Yang DK, Lee JH, Park SJ, Cho KO (2013) Pathogenicity of porcine G9P[23] and G9P[7] rotaviruses in piglets. Vet Microbiol 166:123–137CrossRefPubMed Kim HH, Park JG, Matthijnssens J, Kim HJ, Kwon HJ, Son KY, Ryu EH, Kim DS, Lee WS, Kang MI, Yang DK, Lee JH, Park SJ, Cho KO (2013) Pathogenicity of porcine G9P[23] and G9P[7] rotaviruses in piglets. Vet Microbiol 166:123–137CrossRefPubMed
Metadata
Title
Whole genomic characterization of Korean porcine G8P[7] reassortant rotaviruses
Authors
Jun-Gyu Park
Sang-Ik Park
Nam-Il Woo
Deok-Song Kim
Ja-Young Seo
Mia Madel Alfajaro
Ji-Yun Kim
Mahmoud Soliman
Yeong-Bin Baek
Eun-Hyo Cho
Joseph Kwon
Jong-Soon Choi
Mun-Il Kang
Jelle Matthijnssens
Kyoung-Oh Cho
Publication date
01-10-2016
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 10/2016
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-016-2945-1

Other articles of this Issue 10/2016

Archives of Virology 10/2016 Go to the issue