Skip to main content
Key Specialties
Cardiology Diabetology Endocrinology Gastroenterology Geriatrics and Gerontology Gynecology and Obstetrics Hematology Infectious Disease Internal Medicine Nephrology Neurology Oncology Pediatrics Respiratory Medicine Rheumatology Surgery
Congress Coverage
2024 ACC Congress 2023 ESMO Congress 2023 EASD Congress 2023 ERS Congress 2023 ESC Congress
Clinical Collections
Advances in Alzheimer’s

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.
ADVANCED SEARCH
Log in
Top
Archives of Virology
Published in: Archives of Virology 12/2013

01-12-2013 | Brief Report

Molecular and biological characterization of corchorus mottle virus, a new begomovirus from Brazil

Authors: Rosana Blawid, Rafaela S. Fontenele, Cristiano Lacorte, Simone G. Ribeiro

Published in: Archives of Virology | Issue 12/2013

Login to get access

Abstract

A begomovirus infecting Orinoco jute (Corchorus hirtus) from Brazil was characterized. Molecular analysis revealed a bipartite genomic organization, which is typical of the New World begomoviruses. Sequence analysis and phylogenetic data showed that both genomic components have the closest relationship with abutilon mosaic Brazil virus, with an identity of 87.3 % for DNA-A, indicating that this virus is a member of a new begomovirus species for which the name “Corchorus mottle virus” (CoMoV) is proposed. Sida rhombifolia plants inoculated by biolistics with an infectious clone of CoMoV showed systemic vein chlorosis, mottling and leaf deformation symptoms, while Nicotiana benthamiana and tomato plants had symptomless infection. CoMoV is the first corchorus-infecting begomovirus reported in Brazil.
Appendix
Available only for authorised users
Literature
1.
Arguello-Astorga GR, Guevara-Gonzalez RG, Herrera-Estrella LR, Rivera-Bustamante RF (1994) Geminivirus replication origins have a group-specific organization of iterative elements: a model for replication. Virology 203:90–100PubMedCrossRef
2.
Arnaud LSEP, Santos CDG, Lima JAA, Feitosa FAA (2007) Predominância de begomovírus em tomateiros na região produtora da Ibiapaba, Ceará, e sua detecção natural em plantas daninhas. Fitopatol Bras 32:241–246CrossRef
3.
Barbosa JC, Barreto SS, Inoue-Nagata AK, Reis MS, Firmino AC, Bergamin A, Rezende JAM (2009) Natural infection of Nicandra physaloides by Tomato severe rugose virus in Brazil. J Gen Plant Pathol 75:440–443CrossRef
4.
Barreto S, Hallwas M, Aquino O, Inoue-Nagata AK (2013) A study of weeds as potential inoculum sources for atomato-infecting begomovirus in Central Brazil. Phytopathology 103:436–444PubMedCrossRef
5.
Bovini MG (2010) Corchorus Lista de Espécies da Flora do Brasil. Jardim Botânico do Rio de Janeiro, Rio de Janeiro
6.
Briddon RW, Stanley J (2006) Subviral agents associated with plant single-stranded DNA viruses. Virology 344:198–210PubMedCrossRef
7.
Brown JK, Idris AM, Ostrow KM, Goldberg N, French R, Stenger DC (2005) Genetic and phenotypic variation of the pepper golden mosaic virus complex. Phytopathology 95:1217–1224PubMedCrossRef
8.
Brown JK, Fauquet CM, Briddon RW, Zerbini M, Moriones E, Navas-Castillo J (2012) Family Geminiviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz E (eds) Virus Taxonomy: Ninth Report of the International Committee on Taxonomy of Viruses. Elsevier Academic Press, San Diego, pp 351–373
9.
Castillo-Urquiza GP, Beserra JE Jr, Bruckner FP, Lima AT, Varsani A, Alfenas-Zerbini P, Murilo Zerbini F (2008) Six novel begomoviruses infecting tomato and associated weeds in Southeastern Brazil. Arch Virol 153:1985–1989PubMedCrossRef
10.
Doyle JJ, Doyle JL (1987) A rapid isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11–15
11.
Eagle PA, Orozco BM, Hanley-Bowdoin L (1994) A DNA sequence required for geminivirus replication also mediates transcriptional regulation. Plant Cell 6:1157–1170PubMed
12.
Eagle PA, Hanley-Bowdoin L (1997) Cis Elements that contribute to geminivirus transcriptional regulation and the efficiency of DNA replication. J Virol 71:6947–6955PubMed
13.
Faria JC, Bezerra IC, Zerbini FM, Ribeiro SG, Lima MF (2000) Situação atual das geminiviroses no Brasil. Fitopatol Bras 25:125–137
14.
Fauquet CM, Briddon RW, Brown JK, Moriones E, Stanley J, Zerbini M, Zhou X (2008) Geminivirus strain demarcation and nomenclature. Arch Virol 153:783–821PubMedCrossRef
15.
Fernandes FR, Albuquerque LC, Oliveira CL, Cruz AR, Rocha WB, Pereira TG, Naito FY, Dias NM, Nagata T, Faria JC, Zerbini FM, Aragao FJ, Inoue-Nagata AK (2011) Molecular and biological characterization of a new Brazilian begomovirus, euphorbia yellow mosaic virus (EuYMV), infecting Euphorbia heterophylla plants. Arch Virol 156:2063–2069PubMedCrossRef
16.
Ghosh R, Paul S, Das S, Palit P, Acharyya S, Das A, Mir J, Ghosh S, Roy A (2008) Molecular evidence for existence of a New World begomovirus associated with yellow mosaic disease Corchorus capsularis in India. Australas Plant Dis Notes 3:59–62CrossRef
17.
Ghosh R, Palit P, Paul S, Ghosh SK, Roy A (2012) Detection of Corchorus golden mosaic virus associated with yellow mosaic disease of jute (Corchorus capsularis). Indian J Virol 23:70–74PubMedCrossRef
18.
Guglieri-Caporal A, Caporal FJM, Pott A (2010) Phytosociology of sown pasture weeds under two levels of degradation in Brazilian savanna areas, Mato Grosso do Sul State, Brazil. Pesquisa Agropecuária Tropical 40:312–321CrossRef
19.
Ha C, Coombs S, Revill P, Harding R, Vu M, Dale J (2006) Corchorus yellow vein virus, a New World geminivirus from the Old World. J Gen Virol 87:997–1003PubMedCrossRef
20.
Ha C, Coombs S, Revill P, Harding R, Vu M, Dale J (2008) Molecular characterization of begomoviruses and DNA satellites from Vietnam: additional evidence that the New World geminiviruses were present in the Old World prior to continental separation. J Gen Virol 89:312–326PubMedCrossRef
21.
Haible D, Kober S, Jeske H (2006) Rolling circle amplification revolutionizes diagnosis and genomics of geminiviruses. J Virol Methods 135:9–16PubMedCrossRef
22.
Harimalala M, Lefeuvre P, De Bruyn A, Tiendrebeogo F, Hoareau M, Villemot J, Ranomenjanahary S, Andrianjaka A, Reynaud B, Lett JM (2012) A novel cassava-infecting begomovirus from Madagascar: cassava mosaic Madagascar virus. Arch Virol 157:2027–2030PubMedCrossRef
23.
Hernandez-Zepeda C, Idris AM, Carnevali G, Brown JK, Moreno-Valenzuela OA (2007) Molecular characterization and phylogenetic relationships of two new bipartite begomovirus infecting malvaceous plants in Yucatan, Mexico. Virus Genes 35:369–377PubMedCrossRef
24.
Hill JE, Strandberg JO, Hiebert E, Lazarowitz SG (1998) Asymmetric infectivity of pseudorecombinants of cabbage leaf curl virus and squash leaf curl virus: Implications for bipartite geminivirus evolution and movement. Virology 250:283–292PubMedCrossRef
25.
Idris AM, Brown JK (2005) Cotton leaf crumple virus Is a distinct Western Hemisphere begomovirus species with complex evolutionary relationships indicative of recombination and reassortment. Phytopathology 94:1068–1074CrossRef
26.
Inoue-Nagata AK, Albuquerque LC, Rocha WB, Nagata T (2004) A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase. J Virol Methods 116:209–211PubMedCrossRef
27.
28.
Kissmann KG, Groth D (1995) Plantas infestantes e nocivas, 1st edn. BASF, São Paulo
29.
Lazarowitz SG (1992) Geminiviruses: genome structure and gene function. Crit Rev Plant Sci 11:327–349
30.
Marquez-Martin B, Maeso D, Martinez-Ayala A, Bernal R, Teresa Federici M, Vincelli P, Navas-Castillo J, Moriones E (2012) Diverse population of a new bipartite begomovirus infecting tomato crops in Uruguay. Arch Virol 157:1137–1142PubMedCrossRef
31.
Morales FJ, Anderson PK (2001) The emergence and dissemination of whitefly-transmitted geminiviruses in Latin America. Arch Virol 146:415–441PubMedCrossRef
32.
Mubin M, Briddon RW, Mansoor S (2009) Diverse and recombinant DNA betasatellites are associated with a begomovirus disease complex of Digera arvensis, a weed host. Virus Res 142:208–212PubMedCrossRef
33.
Navas-Castillo J, Fiallo-Olive E, Sanchez-Campos S (2011) Emerging virus diseases transmitted by whiteflies. Annu Rev Phytopathol 49:219–248PubMedCrossRef
34.
Paprotka T, Metzler V, Jeske H (2010) The first DNA 1-like alpha satellites in association with New World begomoviruses in natural infections. Virology 404:148–157PubMedCrossRef
35.
Paprotka T, Metzler V, Jeske H (2010) The complete nucleotide sequence of a new bipartite begomovirus from Brazil infecting Abutilon. Arch Virol 155:813–816PubMedCrossRef
36.
Ribeiro SG, Ambrozevícius LP, De Avila AC, Bezerra IC, Calegario RF, Fernandes JJ, Lima MF, Mello RN, Rocha H, Zerbini FM (2003) Distribution and genetic diversity of tomato-infecting geminiviruses in Brazil. Arch Virol 148:281–295PubMedCrossRef
37.
Ribeiro SG, Martin DP, Lacorte C, Simões IC, Orlandini DRS, Inoue-Nagata AK (2007) Molecular and biological characterization of tomato chlorotic mottle virus suggests that recombination underlies the evolution and diversity of Brazilian tomato begomoviruses. Phytopathology 97:702–711PubMedCrossRef
38.
Rojas MR, Gilbertson RL, Russell DR, Maxwell DP (1993) Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminiviruses. Plant Dis 77:340–347CrossRef
39.
Silva SJC, Castillo-Urquiza GP, Hora-Junior BT, Assuncao IP, Lima GSA, Pio-Ribeiro G, Mizubuti ESG, Zerbini FM (2011) High genetic variability and recombination in a begomovirus population infecting the ubiquitous weed Cleome affinis in Northeastern Brazil. Arch Virol 156:2205–2213PubMedCrossRef
40.
Silva SJC, Castillo-Urquiza GP, Hora Junior BT, Assunção IP, Lima GSA, Pio-Ribeiro G, Mizubuti ESG, Zerbini FM (2012) Species diversity, phylogeny and genetic variability of begomovirus populations infecting leguminous weeds in northeastern Brazil. Plant Pathol 61:457–467CrossRef
41.
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739PubMedCrossRef
42.
USDA (2012) Germplasm Resources Information Network - (GRIN) [Online Database]. In: ARS NGRP (ed) National Germplasm Resources Laboratory, Beltsville, Maryland
43.
Varma A, Malathi VG (2003) Emerging geminivirus problems: a serious threat to crop production. Ann Appl Biol 142:145–164CrossRef
Metadata
Title
Molecular and biological characterization of corchorus mottle virus, a new begomovirus from Brazil
Authors
Rosana Blawid
Rafaela S. Fontenele
Cristiano Lacorte
Simone G. Ribeiro
Publication date
01-12-2013
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 12/2013
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-013-1764-x

Other articles of this Issue 12/2013

Archives of Virology 12/2013 Go to the issue

Original Article

Matrix metalloproteinases and their tissue inhibitors in serum and cerebrospinal fluid of children with Japanese encephalitis virus infection

Original Article

Genetic diversity and mutation of avian paramyxovirus serotype 1 (Newcastle disease virus) in wild birds and evidence for intercontinental spread

Original Article

Factors responsible for pathogenicity in chickens of a low-pathogenic H7N7 avian influenza virus isolated from a feral duck

Annotated Sequence Record

Complete genome sequence of a novel dsRNA mycovirus isolated from the phytopathogenic fungus Verticillium dahliae Kleb.

Brief Report

Characterization of signal sequences determining the nuclear export of Newcastle disease virus matrix protein

Original Article

Serological study of vaccinia virus reservoirs in areas with and without official reports of outbreaks in cattle and humans in São Paulo, Brazil
Obesity Clinical Trial Summary

At a glance: The STEP trials

Read more

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Pediatric Cardiology Video

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

Cardiopulmonary Comorbidity Video

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Valvular Heart Disease Video

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.

ACC 2024 Congress Coverage

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.

Watch now

Semaglutide benefits people with type 2 diabetes and obesity-related heart failure

16-04-2024 Type 2 Diabetes News

Incentivised to exercise

11-04-2024 Lifestyle Modifications News

New intervention for STEMI-related cardiogenic shock

10-04-2024 Myocardial Infarction News

» View more highlights on the ACC 2024 congress hub page

Image Credits