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Published in: Archives of Virology 3/2013

01-03-2013 | Brief Report

Molecular identification and phylogenetic study of coxsackievirus A24 variant isolated from an outbreak of acute hemorrhagic conjunctivitis in India in 2010

Authors: Deepti Shukla, Arvind Kumar, Shalini Srivastava, Tapan N. Dhole

Published in: Archives of Virology | Issue 3/2013

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Abstract

An outbreak of acute hemorrhagic conjunctivitis (AHC) occured in India between August and October 2010. Molecular typing by RT-PCR and sequencing of a partial VP1 region identified coxsackievirus A24 variant (CV A24v) as the serotype involved in this outbreak. Phylogenetic analysis based on the VP1 and 3C genes revealed that CV A24v strains associated with the 2010 AHC outbreak in India were genetically similar to strains from Central and South America that caused outbreaks of AHC in Cuba between 2008 and 2009 and Brazil in 2009. The result shows that the Indian strain of CV A24v may be responsible for the recent AHC outbreak in Marseille, France, in 2012.
Literature
1.
go back to reference Knowles NJ, Hovi T, Hyypiä T, King AMQ, Lindberg M, Pallansch MA, Palmenberg AC, Simmonds P, Skern T, Stanway G, Yamashita T, Zell R (2011) Picornaviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy: classification and nomenclature of viruses: ninth report of the international committee on taxonomy of viruses. Elsevier, San Diego, pp 855–880 Knowles NJ, Hovi T, Hyypiä T, King AMQ, Lindberg M, Pallansch MA, Palmenberg AC, Simmonds P, Skern T, Stanway G, Yamashita T, Zell R (2011) Picornaviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy: classification and nomenclature of viruses: ninth report of the international committee on taxonomy of viruses. Elsevier, San Diego, pp 855–880
2.
go back to reference Pallansch MA, Roos RP (2001) Enteroviruses: polioviruses, coxsackieviruses, echoviruses and newer enteroviruses. In: Knipe DM et al (eds) Fields virology, 4th edn. Lippincott Williams & Wilkins, Philadelphia, pp 723–775 Pallansch MA, Roos RP (2001) Enteroviruses: polioviruses, coxsackieviruses, echoviruses and newer enteroviruses. In: Knipe DM et al (eds) Fields virology, 4th edn. Lippincott Williams & Wilkins, Philadelphia, pp 723–775
3.
go back to reference Palacios G, Oberste MS (2005) Enteroviruses as agents of emerging infectious diseases. J Neurovirol 11:424–433PubMedCrossRef Palacios G, Oberste MS (2005) Enteroviruses as agents of emerging infectious diseases. J Neurovirol 11:424–433PubMedCrossRef
4.
go back to reference Bahri O, Rezig D, Nejma-Oueslati BB, Yahia AB, Sassi JB, Hogga N, Sadraoui A, Triki H (2005) Enteroviruses in Tunisia: virological surveillance over 12 years (1992–2003). J Med Microbiol 54:63–69PubMedCrossRef Bahri O, Rezig D, Nejma-Oueslati BB, Yahia AB, Sassi JB, Hogga N, Sadraoui A, Triki H (2005) Enteroviruses in Tunisia: virological surveillance over 12 years (1992–2003). J Med Microbiol 54:63–69PubMedCrossRef
5.
go back to reference Mirkovic RR, Schmidt NJ, Yin-Murphy M, Melnick ML (1974) Enterovirus etiology of the Singapore epidemic of acute conjunctivitis. Intervirology 4:119–127PubMed Mirkovic RR, Schmidt NJ, Yin-Murphy M, Melnick ML (1974) Enterovirus etiology of the Singapore epidemic of acute conjunctivitis. Intervirology 4:119–127PubMed
6.
go back to reference Khan A, Sharif S, Shaukat S, Khan S, Zaidi S (2008) An outbreak of acute hemorrhagic conjunctivitis (AHC) caused by coxsackievirus A24 variant in Pakistan. Virus Res 137:150–152PubMedCrossRef Khan A, Sharif S, Shaukat S, Khan S, Zaidi S (2008) An outbreak of acute hemorrhagic conjunctivitis (AHC) caused by coxsackievirus A24 variant in Pakistan. Virus Res 137:150–152PubMedCrossRef
7.
go back to reference Yeo DS, Seah SG, Chew JS, Lim EA, Liaw JC, Loh JP, Tan BH (2007) Molecular identification of coxsackievirus A24 variant, isolated from an outbreak of acute hemorrhagic conjunctivitis in Singapore in 2005. Arch Virol 152:2005–2016PubMedCrossRef Yeo DS, Seah SG, Chew JS, Lim EA, Liaw JC, Loh JP, Tan BH (2007) Molecular identification of coxsackievirus A24 variant, isolated from an outbreak of acute hemorrhagic conjunctivitis in Singapore in 2005. Arch Virol 152:2005–2016PubMedCrossRef
8.
go back to reference Wu D, Ke CW, Mo YL, Sun LM, Li H, Chen QX, Zou LR, Fang L, Huang P, Zhen HY (2008) Multiple outbreaks of acute hemorrhagic conjunctivitis due to a variant of coxsackievirus A24: Guangdong, China 2007. J Med Virol 80:1762–1768PubMedCrossRef Wu D, Ke CW, Mo YL, Sun LM, Li H, Chen QX, Zou LR, Fang L, Huang P, Zhen HY (2008) Multiple outbreaks of acute hemorrhagic conjunctivitis due to a variant of coxsackievirus A24: Guangdong, China 2007. J Med Virol 80:1762–1768PubMedCrossRef
9.
go back to reference Leveque N, Amine IL, Cartet G, Hammani AB, Khazraji YC, Lina B, Muyembe JJ, Norder H, Chomel JJ (2006) Two outbreaks of acute hemorrhagic conjunctivitis in Africa due to genotype III coxsackievirus A24 variant. Eur J Clin Microbiol Infect Dis 26:199–202CrossRef Leveque N, Amine IL, Cartet G, Hammani AB, Khazraji YC, Lina B, Muyembe JJ, Norder H, Chomel JJ (2006) Two outbreaks of acute hemorrhagic conjunctivitis in Africa due to genotype III coxsackievirus A24 variant. Eur J Clin Microbiol Infect Dis 26:199–202CrossRef
10.
go back to reference Tavares FN, Costa EV, Oliveira SS, Nicolai CC, Baran M, da Silva EE (2006) Acute hemorrhagic conjunctivitis and coxsackievirus A24v, Rio de Janeiro, Brazil, 2004. Emerg Infect Dis 12:495–497PubMedCrossRef Tavares FN, Costa EV, Oliveira SS, Nicolai CC, Baran M, da Silva EE (2006) Acute hemorrhagic conjunctivitis and coxsackievirus A24v, Rio de Janeiro, Brazil, 2004. Emerg Infect Dis 12:495–497PubMedCrossRef
11.
go back to reference Park K, Lee K, Lee J, Yeo S, Lee S, Cheon DS, Choi W, Ahn J, Kim S, Jee Y (2006) Acute hemorrhagic conjunctivitis epidemic caused by coxsackievirus A24 variants in Korea during 2002–2003. J Med Virol 78:91–97PubMedCrossRef Park K, Lee K, Lee J, Yeo S, Lee S, Cheon DS, Choi W, Ahn J, Kim S, Jee Y (2006) Acute hemorrhagic conjunctivitis epidemic caused by coxsackievirus A24 variants in Korea during 2002–2003. J Med Virol 78:91–97PubMedCrossRef
12.
go back to reference Kurokawa M, Rai SK, Ono K, Gurung R, Ruit S (2006) Viral investigation of acute hemorrhagic conjunctivitis outbreak (2003) in Nepal using molecular methods. Southeast Asian J Trop Med Public Health 37:904–910PubMed Kurokawa M, Rai SK, Ono K, Gurung R, Ruit S (2006) Viral investigation of acute hemorrhagic conjunctivitis outbreak (2003) in Nepal using molecular methods. Southeast Asian J Trop Med Public Health 37:904–910PubMed
13.
go back to reference Cabrerizo M, Echevarria JE, Otero A, Lucas P, Trallero G (2008) Molecular characterization of a coxsackievirus A24 variant that caused an outbreak of acute haemorrhagic conjunctivitis in Spain, 2004. J Clin Virol 43:323–327PubMedCrossRef Cabrerizo M, Echevarria JE, Otero A, Lucas P, Trallero G (2008) Molecular characterization of a coxsackievirus A24 variant that caused an outbreak of acute haemorrhagic conjunctivitis in Spain, 2004. J Clin Virol 43:323–327PubMedCrossRef
14.
go back to reference Chu PY, Ke GM, Chang CH, Lin JC, Sun CY, Huang WL, Tsai YC, Ke LY, Lin KH (2009) Molecular epidemiology of coxsackie A type 24 variant in Taiwan, 2000–2007. J Clin Virol 45:285–291PubMedCrossRef Chu PY, Ke GM, Chang CH, Lin JC, Sun CY, Huang WL, Tsai YC, Ke LY, Lin KH (2009) Molecular epidemiology of coxsackie A type 24 variant in Taiwan, 2000–2007. J Clin Virol 45:285–291PubMedCrossRef
15.
go back to reference Tavares FN, Campos Rde M, Burlandy FM, Fontella R, de Melo MM, da Costa EV, da Silva EE (2011) Molecular characterization and phylogenetic study of coxsackievirus A24v causing outbreaks of acute hemorrhagic conjunctivitis (AHC) in Brazil. PLoS One 6:e23206PubMedCrossRef Tavares FN, Campos Rde M, Burlandy FM, Fontella R, de Melo MM, da Costa EV, da Silva EE (2011) Molecular characterization and phylogenetic study of coxsackievirus A24v causing outbreaks of acute hemorrhagic conjunctivitis (AHC) in Brazil. PLoS One 6:e23206PubMedCrossRef
16.
go back to reference De W, Huanying Z, Hui L, Corina M, Xue G, Leng L, Hanri Z, Ling F, Yanling M, Huiqiong Z, Huan Z, Jing K, Caiyun L, Yoshida H, Changwen K (2012) Phylogenetic and molecular characterization of coxsackievirus A24 variant isolates from a 2010 acute hemorrhagic conjunctivitis outbreak in Guangdong. China. Virol J 9:41CrossRef De W, Huanying Z, Hui L, Corina M, Xue G, Leng L, Hanri Z, Ling F, Yanling M, Huiqiong Z, Huan Z, Jing K, Caiyun L, Yoshida H, Changwen K (2012) Phylogenetic and molecular characterization of coxsackievirus A24 variant isolates from a 2010 acute hemorrhagic conjunctivitis outbreak in Guangdong. China. Virol J 9:41CrossRef
17.
go back to reference Aubry C, Gautret P, Nougairede A, Dussouil AS, Botelho-Nevers E, Zandotti C, De Lamballerie X, Brouqui P, Parola P (2012) 2012 outbreak of acute haemorrhagic conjunctivitis in Indian Ocean Islands: identification of coxsackievirus A24 in a returned traveller. Euro Surveill 17, pii: 20185 Aubry C, Gautret P, Nougairede A, Dussouil AS, Botelho-Nevers E, Zandotti C, De Lamballerie X, Brouqui P, Parola P (2012) 2012 outbreak of acute haemorrhagic conjunctivitis in Indian Ocean Islands: identification of coxsackievirus A24 in a returned traveller. Euro Surveill 17, pii: 20185
18.
go back to reference Fonseca MC, Sarmiento L, Resik S, Pereda N, Rodríguez H, Kourí V, Martínez PA, Piñón A, Limonta D, Más P, Hung LH (2012) Isolation of Coxsackievirus A24 variant from patients with hemorrhagic conjunctivitis in Cuba, 2008–2009. J Clin Virol 53:77–81PubMedCrossRef Fonseca MC, Sarmiento L, Resik S, Pereda N, Rodríguez H, Kourí V, Martínez PA, Piñón A, Limonta D, Más P, Hung LH (2012) Isolation of Coxsackievirus A24 variant from patients with hemorrhagic conjunctivitis in Cuba, 2008–2009. J Clin Virol 53:77–81PubMedCrossRef
19.
go back to reference Christopher S, John TJ, Charles V, Ray S (1977) Coxsackievirus A24 variant EH 24/70 and enterovirus type 70 in an epidemic of acute haemorrhagic conjunctivitis—a preliminary report. Indian J Med Res 65:593–595PubMed Christopher S, John TJ, Charles V, Ray S (1977) Coxsackievirus A24 variant EH 24/70 and enterovirus type 70 in an epidemic of acute haemorrhagic conjunctivitis—a preliminary report. Indian J Med Res 65:593–595PubMed
20.
go back to reference Christopher S, Theogaraj S, Godbole S, John TJ (1982) An epidemic of acute hemorrhagic conjunctivitis due to coxsackievirus A24. J Infect Dis 146:16–19PubMedCrossRef Christopher S, Theogaraj S, Godbole S, John TJ (1982) An epidemic of acute hemorrhagic conjunctivitis due to coxsackievirus A24. J Infect Dis 146:16–19PubMedCrossRef
21.
go back to reference Broor S, Kishore J, Dogra V, Satapathy G, Seth P (1992) An epidemic of acute haemorrhagic conjunctivitis caused by coxsackie A24 variant. Indian J Med Res 95:253–255PubMed Broor S, Kishore J, Dogra V, Satapathy G, Seth P (1992) An epidemic of acute haemorrhagic conjunctivitis caused by coxsackie A24 variant. Indian J Med Res 95:253–255PubMed
22.
go back to reference Kishore J, Isomura S (2002) Detection & differentiation of Coxsackie A 24 variant isolated from an epidemic of acute haemorrhagic conjunctivitis in north India by RT-PCR using a novel primer pair. Indian J Med Res 115:176–183PubMed Kishore J, Isomura S (2002) Detection & differentiation of Coxsackie A 24 variant isolated from an epidemic of acute haemorrhagic conjunctivitis in north India by RT-PCR using a novel primer pair. Indian J Med Res 115:176–183PubMed
23.
go back to reference Madhavan HN, Malathy J, Priya K (2000) An outbreak of acute conjunctivitis caused by Coxsackie virus A 24. Indian J Ophthalmol 48:159PubMed Madhavan HN, Malathy J, Priya K (2000) An outbreak of acute conjunctivitis caused by Coxsackie virus A 24. Indian J Ophthalmol 48:159PubMed
24.
go back to reference Gopalkrishna V, Patil PR, Kolhapure RM, Bilaiya H, Fulmali PV, Deolankar RP (2007) Outbreak of acute hemorrhagic conjunctivitis in Maharashtra and Gujarat states of India, caused by Coxsackie virus A-24 variant. J Med Virol 79:748–753PubMedCrossRef Gopalkrishna V, Patil PR, Kolhapure RM, Bilaiya H, Fulmali PV, Deolankar RP (2007) Outbreak of acute hemorrhagic conjunctivitis in Maharashtra and Gujarat states of India, caused by Coxsackie virus A-24 variant. J Med Virol 79:748–753PubMedCrossRef
25.
go back to reference Gunson RN, Maclean AR, Shepherd SJ, Carman WF (2009) Simultaneous detection and quantitation of cytomegalovirus, Epstein-Barr virus, and adenovirus by use of real-time PCR and pooled standards. J Clin Microbiol 47:765–770PubMedCrossRef Gunson RN, Maclean AR, Shepherd SJ, Carman WF (2009) Simultaneous detection and quantitation of cytomegalovirus, Epstein-Barr virus, and adenovirus by use of real-time PCR and pooled standards. J Clin Microbiol 47:765–770PubMedCrossRef
26.
go back to reference Nix WA, Oberste MS, Pallansch MA (2006) Sensitive, semi nested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens. J Clin Microbiol 44:2698–2704PubMedCrossRef Nix WA, Oberste MS, Pallansch MA (2006) Sensitive, semi nested PCR amplification of VP1 sequences for direct identification of all enterovirus serotypes from original clinical specimens. J Clin Microbiol 44:2698–2704PubMedCrossRef
27.
go back to reference Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120PubMedCrossRef Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120PubMedCrossRef
28.
go back to reference Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. Mol Biol Evol 24:1596–1599PubMedCrossRef Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. Mol Biol Evol 24:1596–1599PubMedCrossRef
29.
go back to reference Goh KT, Ooi PL, Miyamura K, Ogino T, Yamazaki S (1990) Acute haemorrhagic conjunctivitis: seroepidemiology of coxsackievirus A24 variant and enterovirus 70 in Singapore. J Med Virol 31:245–247PubMedCrossRef Goh KT, Ooi PL, Miyamura K, Ogino T, Yamazaki S (1990) Acute haemorrhagic conjunctivitis: seroepidemiology of coxsackievirus A24 variant and enterovirus 70 in Singapore. J Med Virol 31:245–247PubMedCrossRef
Metadata
Title
Molecular identification and phylogenetic study of coxsackievirus A24 variant isolated from an outbreak of acute hemorrhagic conjunctivitis in India in 2010
Authors
Deepti Shukla
Arvind Kumar
Shalini Srivastava
Tapan N. Dhole
Publication date
01-03-2013
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 3/2013
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-012-1520-7

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