Skip to main content
Key Specialties
Cardiology Diabetology Endocrinology Gastroenterology Geriatrics and Gerontology Gynecology and Obstetrics Hematology Infectious Disease Internal Medicine Nephrology Neurology Oncology Pediatrics Respiratory Medicine Rheumatology Surgery
Congress Coverage
2024 ACC Congress 2023 ESMO Congress 2023 EASD Congress 2023 ERS Congress 2023 ESC Congress
Clinical Collections
Advances in Alzheimer’s

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.
ADVANCED SEARCH
Log in
Top
Archives of Virology
Published in: Archives of Virology 3/2012

01-03-2012 | Brief Report

Geographical differentiation of the molecular diversity of cacao swollen shoot virus in Togo

Authors: Franck Oro, Essivi Mississo, Mireille Okassa, Claire Guilhaumon, Catherine Fenouillet, Christian Cilas, Emmanuelle Muller

Published in: Archives of Virology | Issue 3/2012

Login to get access

Abstract

The variability of cacao swollen shoot virus (CSSV) was studied in two areas of Togo with distinct epidemiological backgrounds, Kloto and Litimé. This molecular study was based on 120 sequence comparisons of the first part of ORF3 of the viral genome. The phylogenetic study distinguished three groups of CSSV isolates, A, B, and C, with clear geographical differentiation between the Kloto and Litimé areas. The only group detected in Kloto was group C, whereas the Litimé area only contained isolates from groups A and B, which most probably originated from Ghana. The divergence between the three groups strongly suggests a different origin for each of the groups.
Literature
1.
Attafuah A, Blencowe J, Brunt AA (1963) Swollen shoot disease of cocoa in Sierra Leone. Trop Agric Trinidad 40:229–232
2.
Castel C, Amefia YK, Djiekpor EK, Partiot M, Segbor A (1980) Le swollen shoot du cacaoyer au Togo. Les différentes formes de viroses et leurs conséquences économiques. Café, Cacao, Thé 24:131–146
3.
Cilas C, Muller E, Mississo E (2005) Occurrence of Cacao swollen shoot virus in Litimé, the Main Cocoa-Producing Area of Togo. Plant Dis 89:913CrossRef
4.
Crop protection Compendium C (2002) Cacao swollen shoot virus. CABI Publishing, Wallingford
5.
Fauquet C, Mayo M, Maniloff J, Desselberger U, Ball L (2005) Virus taxonomy: eighth report of the international committee on taxonomy of viruses. Elsevier Academic Press, Amsterdam
6.
Hagen LS, Jacquemond M, Lepingle A, Lot H, Tepfer M (1993) Nucleotide sequence and genomic organization of Cacao swollen shoot virus. Virology 196:619–628PubMedCrossRef
7.
Harper G, Hart D, Moult S, Hull R, Geering A, Thomas J (2005) The diversity of Banana streak virus isolates in Uganda. Arch Virol 150:2407–2420PubMedCrossRef
8.
Jacquot E, Hagen LS, Michler P, Rohfritsch O, Stussi-Garaud C, Keller M, Jacquemond M, Yot P (1999) In situ localization of cacao swollen shoot virus in Theobroma cacao. Arch Virol 144:259–271PubMedCrossRef
9.
Kebe BI, Kouakou K, N’Guessan NF, Assiri AA, Adiko A, Aké S, Anno AP (2006) Le swollen shoot en Côte d’Ivoire: situation actuelle et perpectives. In: 15 ème conférence internationale sur la recherche cacaoyère. San José, Costa Rica, pp 907–922
10.
Kenyon L, Lebas BS, Seal SE (2008) Yams (Dioscorea spp.) from the South Pacific Islands contain many novel badnaviruses: implications for international movement of yam germplasm. Arch Virol 153:877–889PubMedCrossRef
11.
Kirkpatrick TW (1953) Insect pests of cacao and insect vectors of cacao virus diseases. Cocoa Research 1945–1951. Imperial College of Tropical Agriculture, Trinidad, pp 130–131
12.
Legg JT, Bonney JK (1967) The host range and vector species of viruses from Cola chlamydantha K. Schum., Adansonia digitata L. and Theobroma cacao L. Ann Appl Biol 60:399–403CrossRef
13.
Lockhart BEL (1990) Evidence for a double-stranded circular DNA genome in a second group of plant viruses. Phytopathology 80:127–131CrossRef
14.
Lockhart BEL, Olszewski NE (1993) Serological and genomic heterogeneity of banana streak badnavirus: implications for virus detection in Musa germplasm. In: Ganry J (ed) Breeding banana and plantain for resistance to diseases and pests. CIRAD/INIBAP, Montpellier, pp 105–113
15.
Lot H, Djiekpor E, Jacquemond M (1991) Characterization of the genome of Cacao swollen shoot virus. J Gen Virol 72:1735–1739PubMedCrossRef
16.
Mangenot G, Alibert H, Basset A (1946) Sur les caractères du swollen shoot en Côte d’Ivoire. Rev Int Bot Appl 283:13
17.
Muller E, Jacquot E, Yot P (2001) Early detection of Cacao swollen shoot virus using the polymerase chain reaction. J Virol Methods 93:15–22PubMedCrossRef
18.
Muller E, Sackey S (2005) Molecular variability analysis of five new complete Cacao swollen shoot virus genomic sequences. Arch Virol 150:53–66PubMedCrossRef
19.
Partiot M, Djiekpor EK, Amefia YK, Bakar KA (1978) Le “swollen shoot” du cacaoyer au Togo. Inventaire préliminaire et première estimation des pertes causées par la maladie. Café, Cacao, Thé 22:217–228
20.
Perrier X, Flori A, Bonnot F (2003) Data analysis methods. In: Hamon P, Seguin M, Perrier X, Glaszmann JC (eds) Genetic diversity of cultivated tropical plants. Enfield Science Publishers, Montpellier, pp 43–76
21.
Posnette AF (1947) Virus diseases of cacao in West Africa, Cacao viruses 1A, 1B, 1C, and 1D. Ann Appl Biol 34:388–402CrossRef
22.
Posnette AF, Robertson NF, Todd J (1950) Virus disease of cacao in West Africa. V. Alternative host plants. Ann Appl Biol 37:229–240CrossRef
23.
Posnette AF (1981) The role of wild hosts in cocoa swollen shoot disease. In: Thresh JM (ed) Pests, pathogens and vegetation. Pitman, London, pp 71–78
24.
Rosas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R (2003) DNASP, DNA polymorphism analysis by the coalescent and other methods. Bioinformatics 19:2496–2497CrossRef
25.
Steven WH (1936) A new disease of cacao in the Gold Coast. Gold Coast Farmer 5:122–144
26.
Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680PubMedCrossRef
27.
Thresh JM (1959) The control of cacao swollen shoot disease in Nigeria. Trop Agric Trinidad 36:35–44
28.
Thresh JM, Owusu GK, Ollennu LAA (1988) Cocoa swollen shoot: an archetypal crowd disease. Z Pflanzenk Pflanzen 95:428–446
29.
Thresh JM (1991) The ecology of tropical plant viruses. Plant Pathol 40:324–339CrossRef
Metadata
Title
Geographical differentiation of the molecular diversity of cacao swollen shoot virus in Togo
Authors
Franck Oro
Essivi Mississo
Mireille Okassa
Claire Guilhaumon
Catherine Fenouillet
Christian Cilas
Emmanuelle Muller
Publication date
01-03-2012
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 3/2012
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-011-1158-x

Other articles of this Issue 3/2012

Archives of Virology 3/2012 Go to the issue

Annotated Sequence Record

Complete genome sequence of mandarin decline Citrus tristeza virus of the Northeastern Himalayan hill region of India: comparative analyses determine recombinant

Annotated Sequence Record

Sequence determination and analysis of the NSs genes of two tospoviruses

Brief Review

Genetic diversity in the 3′-terminal region of papaya ringspot virus (PRSV-W) isolates from watermelon in Oklahoma

Brief Report

Human metapneumovirus strains circulating in Latin America

Brief Report

Phylogenetic and serological analysis of turnip ringspot virus and radish mosaic virus isolates

Original Article

HIV-infection resistance in PMBC-derived dendritic cells modified with recombinant virus
Obesity Clinical Trial Summary

At a glance: The STEP trials

Read more

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Pediatric Cardiology Video

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

Cardiopulmonary Comorbidity Video

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Valvular Heart Disease Video

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Heart Failure Video

Watch this official video from ACC.24. Dr. Biykem Bozkurt discuss last year's major advances in heart failure and cardiomyopathies.

ACC 2024 Congress Coverage

Heart Failure Video

Year in Review: Heart failure and cardiomyopathies

Watch now

Watch this official video from ACC.24. Dr. Biykem Bozkurt discuss last year's major advances in heart failure and cardiomyopathies.

Semaglutide benefits people with type 2 diabetes and obesity-related heart failure

16-04-2024 Type 2 Diabetes News

Incentivised to exercise

11-04-2024 Lifestyle Modifications News

New intervention for STEMI-related cardiogenic shock

10-04-2024 Myocardial Infarction News

» View more highlights on the ACC 2024 congress hub page

Image Credits