Skip to main content
Top
Published in: Archives of Virology 5/2008

01-05-2008 | Annotated Sequence Record

Complete genomic sequence of a Papaya ringspot virus isolate from Hainan Island, China

Authors: Y. W. Lu, W. T. Shen, P. Zhou, Q. J. Tang, Y. M. Niu, M. Peng, Z. Xiong

Published in: Archives of Virology | Issue 5/2008

Login to get access

Excerpt

Papaya ringspot virus (PRSV, genus Potyvirus, family Potyviridae) causes significant yield losses in papaya and in some cucurbits throughout tropical and subtropical regions [7]. Based on its host specificity, PRSV is classified into two biotypes. Type W is known to infect only cucurbits, whereas type P infects both papaya and cucurbits. The first PRSV genome completely sequenced and characterized was the Hawaiian isolate, PRSV-H [11]. The complete sequences of a number of PRSV isolates have since been determined [2, 3, 5, 6, 10]. …
Literature
1.
go back to reference Altshul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410 Altshul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
2.
go back to reference Attasart P, Charoensilp G, Kerbundit S, Panyim S, Juricek M (2002) Nucleotide sequence of a Thai isolate of Papaya ringspot virus type W. Acta Virol l46:241–246 Attasart P, Charoensilp G, Kerbundit S, Panyim S, Juricek M (2002) Nucleotide sequence of a Thai isolate of Papaya ringspot virus type W. Acta Virol l46:241–246
3.
go back to reference Inoue-Nagata AK, Franco CD, Martin DP, Martin DP, Rezende JA, Ferreira GB, Dutra LS, Nagata T (2007) Genome analysis of a severe and a mild isolate of Papaya ringspot virus-type W found in Brazil. Virus Genes 35(1):119–127PubMedCrossRef Inoue-Nagata AK, Franco CD, Martin DP, Martin DP, Rezende JA, Ferreira GB, Dutra LS, Nagata T (2007) Genome analysis of a severe and a mild isolate of Papaya ringspot virus-type W found in Brazil. Virus Genes 35(1):119–127PubMedCrossRef
4.
go back to reference Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163PubMedCrossRef Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163PubMedCrossRef
5.
go back to reference Noa-Carrazana JC, Gonzalez-de-Leon D, Silva-Rosales L (2007) Molecular characterization of a severe isolate of papaya ringspot virus in Mexico and its relationship with other isolates. Virus Genes 35(1):109–117PubMedCrossRef Noa-Carrazana JC, Gonzalez-de-Leon D, Silva-Rosales L (2007) Molecular characterization of a severe isolate of papaya ringspot virus in Mexico and its relationship with other isolates. Virus Genes 35(1):109–117PubMedCrossRef
6.
go back to reference Parameswari B, Mangrauthia S K, Praveen S, Jain R K (2007) Complete genome sequence of an isolate of Papaya ringspot virus from India. Arch Virol 152:843–845PubMedCrossRef Parameswari B, Mangrauthia S K, Praveen S, Jain R K (2007) Complete genome sequence of an isolate of Papaya ringspot virus from India. Arch Virol 152:843–845PubMedCrossRef
7.
go back to reference Purcifull DE, Edwardson JR, Hiebert E, Gonsalves D (1984) Papaya ringspot virus. CMI/AAB descriptions of plant virus, No 292 Purcifull DE, Edwardson JR, Hiebert E, Gonsalves D (1984) Papaya ringspot virus. CMI/AAB descriptions of plant virus, No 292
8.
go back to reference Tennant P, Fermin G, Fitch MM, Manshardt RM, Slightom JL, Gonsalves D (2001) Papaya ringspot virus resistance of transgenic rainbow and SunUp is affected by gene dosage, plant development, and coat protein homology. Eur J Plant Pathol 107:645–653CrossRef Tennant P, Fermin G, Fitch MM, Manshardt RM, Slightom JL, Gonsalves D (2001) Papaya ringspot virus resistance of transgenic rainbow and SunUp is affected by gene dosage, plant development, and coat protein homology. Eur J Plant Pathol 107:645–653CrossRef
9.
go back to reference Tennant P, Souza MT, Gonsalves D, Fitch MM, Manshardt RM, Slightom JL (2005) Line 63-1: a new virus-resistant transgenic papaya. Hortscience 40:1196–1199 Tennant P, Souza MT, Gonsalves D, Fitch MM, Manshardt RM, Slightom JL (2005) Line 63-1: a new virus-resistant transgenic papaya. Hortscience 40:1196–1199
10.
go back to reference Wang CH, Yeh SD (1997) Divergence and conservation of the genomic RNAs of Taiwan and Hawaii strains of papaya ringspot potyvirus. Arch Virol 142:271–85PubMedCrossRef Wang CH, Yeh SD (1997) Divergence and conservation of the genomic RNAs of Taiwan and Hawaii strains of papaya ringspot potyvirus. Arch Virol 142:271–85PubMedCrossRef
11.
go back to reference Yeh SD, Jan FJ, Chiang CH, Doong TJ, Chen MC, Chung PH, Bau HJ (1992) Complete nucleotide sequence and genetic organization of Papaya ringspot virus RNA. J Gen Virol 73:2531–2541PubMedCrossRef Yeh SD, Jan FJ, Chiang CH, Doong TJ, Chen MC, Chung PH, Bau HJ (1992) Complete nucleotide sequence and genetic organization of Papaya ringspot virus RNA. J Gen Virol 73:2531–2541PubMedCrossRef
Metadata
Title
Complete genomic sequence of a Papaya ringspot virus isolate from Hainan Island, China
Authors
Y. W. Lu
W. T. Shen
P. Zhou
Q. J. Tang
Y. M. Niu
M. Peng
Z. Xiong
Publication date
01-05-2008
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 5/2008
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-008-0056-3

Other articles of this Issue 5/2008

Archives of Virology 5/2008 Go to the issue
Live Webinar | 27-06-2024 | 18:00 (CEST)

Keynote webinar | Spotlight on medication adherence

Live: Thursday 27th June 2024, 18:00-19:30 (CEST)

WHO estimates that half of all patients worldwide are non-adherent to their prescribed medication. The consequences of poor adherence can be catastrophic, on both the individual and population level.

Join our expert panel to discover why you need to understand the drivers of non-adherence in your patients, and how you can optimize medication adherence in your clinics to drastically improve patient outcomes.

Prof. Kevin Dolgin
Prof. Florian Limbourg
Prof. Anoop Chauhan
Developed by: Springer Medicine
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discusses last year's major advances in heart failure and cardiomyopathies.