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Archives of Virology
Published in: Archives of Virology 5/2017

01-05-2017 | Annotated Sequence Record

Complete genome sequences of two novel bipartite begomoviruses infecting common bean in Cuba

Authors: Lidia Chang-Sidorchuk, Heidy González-Alvarez, Jesús Navas-Castillo, Elvira Fiallo-Olivé, Yamila Martínez-Zubiaur

Published in: Archives of Virology | Issue 5/2017

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Abstract

The common bean is a host for a large number of begomoviruses (genus Begomovirus, family Geminiviridae) in the New World. Based on the current taxonomic criteria established for the genus Begomovirus, two new members of this genus infecting common bean (Phaseolus vulgaris) in Cuba are herein reported. The cloned bipartite genomes, composed of DNA-A and DNA-B, showed the typical organization of the New World begomoviruses. We propose the names common bean severe mosaic virus and common bean mottle virus for the new begomovirus species.
Literature
1.
Brown JK, Idris AM (2009) A new, virulent, broad host range bean-infecting begomovirus from Puerto Rico: Rhynchosia mild mosaic virus. Annu Rep Bean Improv Coop 52:30
2.
Brown JK, Zerbini FM, Navas-Castillo J, Moriones E, Ramos-Sobrinho R, Silva JC, Fiallo-Olivé E, Briddon RW, Hernández-Zepeda C, Idris A (2015) Revision of Begomovirus taxonomy based on pairwise sequence comparisons. Arch Virol 160:1593–1619CrossRefPubMed
3.
Echemendía A, Ramos P, Peral R, Fuentes A, González G, Sanpedro J, Morales F (2001) Cuban isolate of bean golden yellow mosaic virus is a member of the Mesoamerican BGYMV Group. Plant Dis 85:1030CrossRef
4.
5.
Fiallo-Olivé E, Navas-Castillo J, Moriones E, Martínez-Zubiaur Y (2010) Two novel begomoviruses belonging to different lineages infecting Rhynchosia minima. Arch Virol 155:2053–2058CrossRefPubMed
6.
Fiallo-Olivé E, Márquez-Martín B, Hassan I, Chirinos DT, Geraud-Pouey F, Navas-Castillo J, Moriones E (2013) Complete genome sequences of two novel begomoviruses infecting common bean in Venezuela. Arch Virol 158:723–727CrossRefPubMed
7.
8.
Fourment M, Gibbs AJ, Gibbs MJ (2008) SWeBLAST: a sliding window web-based BLAST tool for recombinant analysis. J Virol Methods 152:98–101CrossRefPubMed
9.
Idris A, Hiebert E, Bird J, Brown J (2003) Two newly described begomoviruses of Macroptilium lathyroides and common bean. Phytopathology 93:774–783CrossRefPubMed
10.
Martin DP, Murrell B, Golden M, Khoosal A, Muhire B (2015) RDP4: Detection and analysis of recombination patterns in virus genomes. Virus Evol 1:vev003CrossRefPubMedPubMedCentral
11.
Martínez Zubiaur Y, Quiñones M, Fonseca D, Potter J, Maxwell D (2002) First report of tomato yellow leaf curl virus associated with beans, Phaseolus vulgaris, in Cuba. Plant Dis 86:814CrossRef
12.
Muhire BM, Varsani A, Martin DP (2014) SDT: a virus classification tool based on pairwise sequence alignment and identity calculation. PLoS ONE 9:e108277CrossRefPubMedPubMedCentral
13.
Navas-Castillo J, Fiallo-Olivé E, Sánchez-Campos S (2011) Emerging virus diseases transmitted by whiteflies. Annu Rev Phytopathol 49:219–248CrossRefPubMed
14.
Permingeat HR, Romagnoli MV, Vallejos RH (1998) A simple method for isolating high yield and quality DNA from cotton (Gossypium hirsutum L.) leaves. Plant Mol Biol Rep 16:1–6CrossRef
15.
16.
Varsani A, Navas-Castillo J, Moriones E, Hernández-Zepeda C, Idris A, Brown JK, Zerbini FM, Martin DP (2014) Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus. Arch Virol 159:2193–2203CrossRefPubMed
17.
Wyatt S, Brown JK (1996) Detection of subgroup III geminivirus isolates in leaf extracts by degenerate primers and polymerase chain reaction. Phytopathology 86:1288–1293CrossRef
Metadata
Title
Complete genome sequences of two novel bipartite begomoviruses infecting common bean in Cuba
Authors
Lidia Chang-Sidorchuk
Heidy González-Alvarez
Jesús Navas-Castillo
Elvira Fiallo-Olivé
Yamila Martínez-Zubiaur
Publication date
01-05-2017
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 5/2017
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-016-3209-9

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