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Archives of Virology
Published in: Archives of Virology 6/2016

01-06-2016 | Annotated Sequence Record

Complete genome sequence of Xishuangbanna flavivirus, a novel mosquito-specific flavivirus from China

Authors: Hang Fan, Qiumin Zhao, Xiaofang Guo, Qiang Sun, Shuqing Zuo, Chao Wu, Hongning Zhou, Xiaoping An, Guangqian Pei, Yigang Tong, Jiusong Zhang, Taoxing Shi

Published in: Archives of Virology | Issue 6/2016

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Abstract

A new flavivirus, Xishuangbanna flavivirus (XFV), infecting Aedes albopictus mosquitoes in Yunnan Province, China, was isolated and sequenced. The single-stranded RNA genome of 10,884 nt contained two open reading frames (ORFs) encoding the polyprotein and FIFO. The genome had a maximum nucleotide sequence identity of 65 % to Parramatta River virus with coverage of only 27 %. Phylogenetic analysis suggested that this virus is most closely related to recognized classical insect-specific flaviviruses (cISF) and most likely has a similar host range. Sequence comparisons and phylogenetic analysis demonstrated that XFV is a new member of the genus Flavivirus.
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Metadata
Title
Complete genome sequence of Xishuangbanna flavivirus, a novel mosquito-specific flavivirus from China
Authors
Hang Fan
Qiumin Zhao
Xiaofang Guo
Qiang Sun
Shuqing Zuo
Chao Wu
Hongning Zhou
Xiaoping An
Guangqian Pei
Yigang Tong
Jiusong Zhang
Taoxing Shi
Publication date
01-06-2016
Publisher
Springer Vienna
Published in
Archives of Virology / Issue 6/2016
Print ISSN: 0304-8608
Electronic ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-016-2827-6

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