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Published in: Virology Journal 1/2014

Open Access 01-12-2014 | Research

Cloning and expression of N22 region of Torque Teno virus (TTV) genome and use of peptide in developing immunoassay for TTV antibodies

Authors: Dhananjay Singh Mankotia, Mohammad Irshad

Published in: Virology Journal | Issue 1/2014

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Abstract

Background

Torque Teno Virus (TTV) is a DNA virus with high rate of prevalence globally. Since its discovery in 1997, several studies have questioned the role of this virus in causing disease. However, it still remains an enigma. Although methods are available for detection of TTV infection, there is still a need for simple, rapid and reliable method for screening of this virus in human population. Present investigation describes the cloning and expression of N22 region of TTV-genome and the use of expressed peptide in development of immunoassay to detect anti-TTV antibodies in serum. Since TTV genotype-1 is more common in India, the serum positive for genotype-1 was used as source of N22 for expression purpose.

Methods

Full length N22 region of ORF1 from TTV genotype-1 was amplified and cloned in pGEM®-T Easy vector. After cloning, the amplicon was transformed and expressed as a fusion protein containing hexa-histidine tag in pET-28a(+) vector using BL21 E. coli cells as host. Expression was conducted both in LB medium as well as ZYP-5052 auto-induction medium. The expressed peptide was purified using metal-chelate affinity chromatography and used as antigen in developing a blot immunoassay.

Results

Analysis of translated product by SDS-PAGE and western blotting demonstrated the presence of 25 kDa polypeptide produced after expression. Solubility studies showed the polypeptide to be associated with insoluble fraction. The use of this peptide as antigen in blot assay produced prominent spot on membrane treated with sera from TTV-infected patients. Analysis of sera from 75 patients with liver and renal diseases demonstrated a successful implication of N22 polypeptide based immunoassay in screening sera for anti-TTV antibodies. Comparison of the immunoassay developed using expressed N22 peptide with established PCR method for TTV-DNA detection showed good coherence between TTV-DNA and presence of anti-TTV antibodies in the sera analysed.

Conclusions

This concludes that TTV N22 region may be expressed and safely used as antigen for blot assay to detect anti-TTV antibodies in sera.
Appendix
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Literature
1.
go back to reference Okamoto H, Akahane Y, Ukita M, Fukuda M, Tsuda F, Miyakawa Y, Mayumi M: Fecal excretion of a nonenveloped DNA virus (TTV) associated with posttransfusion non-A-G hepatitis. J Med Virol 1998, 56: 128-132. 10.1002/(SICI)1096-9071(199810)56:2<128::AID-JMV5>3.0.CO;2-APubMedCrossRef Okamoto H, Akahane Y, Ukita M, Fukuda M, Tsuda F, Miyakawa Y, Mayumi M: Fecal excretion of a nonenveloped DNA virus (TTV) associated with posttransfusion non-A-G hepatitis. J Med Virol 1998, 56: 128-132. 10.1002/(SICI)1096-9071(199810)56:2<128::AID-JMV5>3.0.CO;2-APubMedCrossRef
2.
go back to reference Mushahwar IK, Erker JC, Muerhoff AS, Leary TP, Simons JN, Birkenmeyer LG, Chalmers ML, Pilot-Matias TJ, Dexai SM: Molecular and biophysical characterization of TT virus: evidence for a new virus family infecting humans. Proc Natl Acad Sci U S A 1999, 96: 3177-3182. 10.1073/pnas.96.6.3177PubMedPubMedCentralCrossRef Mushahwar IK, Erker JC, Muerhoff AS, Leary TP, Simons JN, Birkenmeyer LG, Chalmers ML, Pilot-Matias TJ, Dexai SM: Molecular and biophysical characterization of TT virus: evidence for a new virus family infecting humans. Proc Natl Acad Sci U S A 1999, 96: 3177-3182. 10.1073/pnas.96.6.3177PubMedPubMedCentralCrossRef
3.
go back to reference Nishizawa T, Okamoto H, Konishi K, Yoshizawa H, Miyakawa Y, Mayumi M: A novel DNA virus (TTV) associated with elevated transaminase levels in posttransfusion hepatitis of unknown etiology. Biochem Biophys Res Commun 1997, 241: 92-97. 10.1006/bbrc.1997.7765PubMedCrossRef Nishizawa T, Okamoto H, Konishi K, Yoshizawa H, Miyakawa Y, Mayumi M: A novel DNA virus (TTV) associated with elevated transaminase levels in posttransfusion hepatitis of unknown etiology. Biochem Biophys Res Commun 1997, 241: 92-97. 10.1006/bbrc.1997.7765PubMedCrossRef
4.
go back to reference Okamoto H, Nishizawa T, Kato N, Ukita M, Ikeda H, Iizuka H, Miyakawa Y, Mayumi M: Molecular cloning and characterization of a novel DNA virus (TTV) associated with posttransfusion hepatitis of unknown etiology. Hepatol Res 1998, 10: 1-16. 10.1016/S1386-6346(97)00123-XCrossRef Okamoto H, Nishizawa T, Kato N, Ukita M, Ikeda H, Iizuka H, Miyakawa Y, Mayumi M: Molecular cloning and characterization of a novel DNA virus (TTV) associated with posttransfusion hepatitis of unknown etiology. Hepatol Res 1998, 10: 1-16. 10.1016/S1386-6346(97)00123-XCrossRef
5.
go back to reference Ott C, Duret L, Chemin I, Trépo C, Mandrand B, Komurian-Pradel F: Use of a TT virus ORF1 recombinant protein to detect anti-TT virus antibodies in human sera. J Gen Virol 2000, 81: 2949-2958.PubMedCrossRef Ott C, Duret L, Chemin I, Trépo C, Mandrand B, Komurian-Pradel F: Use of a TT virus ORF1 recombinant protein to detect anti-TT virus antibodies in human sera. J Gen Virol 2000, 81: 2949-2958.PubMedCrossRef
6.
go back to reference Miyata H, Tsunoda H, Kazi A, Yamada A, Khan MA, Murakami J, Kamahora T, Shiraki K, Hino S: Identification of a novel GC-rich 113-nucleotide region to complete the circular, single-stranded DNA genome of TT virus, the first human circovirus. J Virol 1999, 73: 3582-3586.PubMedPubMedCentral Miyata H, Tsunoda H, Kazi A, Yamada A, Khan MA, Murakami J, Kamahora T, Shiraki K, Hino S: Identification of a novel GC-rich 113-nucleotide region to complete the circular, single-stranded DNA genome of TT virus, the first human circovirus. J Virol 1999, 73: 3582-3586.PubMedPubMedCentral
7.
go back to reference Peng YH, Nishizawa T, Takahashi M, Ishikawa T, Yoshikawa A, Okamoto H: Analysis of the entire genomes of thirteen TT virus variants classifiable into the fourth and fifth genetic groups, isolated from viremic infants. Arch Virol 2002, 147: 21-41. 10.1007/s705-002-8301-7PubMedCrossRef Peng YH, Nishizawa T, Takahashi M, Ishikawa T, Yoshikawa A, Okamoto H: Analysis of the entire genomes of thirteen TT virus variants classifiable into the fourth and fifth genetic groups, isolated from viremic infants. Arch Virol 2002, 147: 21-41. 10.1007/s705-002-8301-7PubMedCrossRef
8.
go back to reference Takayama S, Yamazaki S, Matsuo S, Sugii S: Multiple infection of TT virus (TTV) with different genotypes in Japanese hemophiliacs. Biochem Biophys Res Commun 1999, 256: 208-211. 10.1006/bbrc.1999.0270PubMedCrossRef Takayama S, Yamazaki S, Matsuo S, Sugii S: Multiple infection of TT virus (TTV) with different genotypes in Japanese hemophiliacs. Biochem Biophys Res Commun 1999, 256: 208-211. 10.1006/bbrc.1999.0270PubMedCrossRef
9.
go back to reference Okamoto H, Takahashi M, Nishizawa T, Ukita M, Fukuda M, Tsuda F, Miyakawa Y, Mayumi M: Marked genomic heterogeneity and frequent mixed infection of TT virus demonstrated by PCR with primers from coding and noncoding regions. Virology 1999, 259: 428-436. 10.1006/viro.1999.9770PubMedCrossRef Okamoto H, Takahashi M, Nishizawa T, Ukita M, Fukuda M, Tsuda F, Miyakawa Y, Mayumi M: Marked genomic heterogeneity and frequent mixed infection of TT virus demonstrated by PCR with primers from coding and noncoding regions. Virology 1999, 259: 428-436. 10.1006/viro.1999.9770PubMedCrossRef
10.
go back to reference Pinho-Nascimento CA, Leite JPG, Niel C, Diniz-Mendes L: Torque teno virus in fecal samples of patients with gastroenteritis: prevalence, genogroups distribution, and viral load. J Med Virol 2011, 83: 1107-1111. 10.1002/jmv.22024PubMedCrossRef Pinho-Nascimento CA, Leite JPG, Niel C, Diniz-Mendes L: Torque teno virus in fecal samples of patients with gastroenteritis: prevalence, genogroups distribution, and viral load. J Med Virol 2011, 83: 1107-1111. 10.1002/jmv.22024PubMedCrossRef
11.
go back to reference Devalle S, Niel C: Distribution of TT virus genomic groups 1–5 in Brazilian blood donors, HBV carriers, and HIV-1-infected patients. J Med Virol 2004, 72: 166-173. 10.1002/jmv.10564PubMedCrossRef Devalle S, Niel C: Distribution of TT virus genomic groups 1–5 in Brazilian blood donors, HBV carriers, and HIV-1-infected patients. J Med Virol 2004, 72: 166-173. 10.1002/jmv.10564PubMedCrossRef
12.
go back to reference Kakkola L, Hedman K, Vanrobaeys H, Hedman L, Söderlund-Venermo M: Cloning and sequencing of TT virus genotype 6 and expression of antigenic open reading frame 2 proteins. J Gen Virol 2002, 83: 979-990.PubMedCrossRef Kakkola L, Hedman K, Vanrobaeys H, Hedman L, Söderlund-Venermo M: Cloning and sequencing of TT virus genotype 6 and expression of antigenic open reading frame 2 proteins. J Gen Virol 2002, 83: 979-990.PubMedCrossRef
13.
go back to reference Bendinelli M, Pistello M, Maggi F, Fornai C, Freer G, Vatteroni ML: Molecular properties, biology, and clinical implications of TT virus, a recently identified widespread infectious agent of humans. Clin Microbiol Rev 2001, 14: 98-113. 10.1128/CMR.14.1.98-113.2001PubMedPubMedCentralCrossRef Bendinelli M, Pistello M, Maggi F, Fornai C, Freer G, Vatteroni ML: Molecular properties, biology, and clinical implications of TT virus, a recently identified widespread infectious agent of humans. Clin Microbiol Rev 2001, 14: 98-113. 10.1128/CMR.14.1.98-113.2001PubMedPubMedCentralCrossRef
14.
go back to reference Tsuda F, Takahashi M, Nishizawa T, Akahane Y, Konishi K, Yoshizawa H, Okamoto H: IgM-class antibodies to TT virus (TTV) in patients with acute TTV infection. Hepatol Res 2001, 19: 1-11. 10.1016/S1386-6346(00)00086-3PubMedCrossRef Tsuda F, Takahashi M, Nishizawa T, Akahane Y, Konishi K, Yoshizawa H, Okamoto H: IgM-class antibodies to TT virus (TTV) in patients with acute TTV infection. Hepatol Res 2001, 19: 1-11. 10.1016/S1386-6346(00)00086-3PubMedCrossRef
15.
go back to reference Handa A, Dickstein B, Young NS, Brown KE: Prevalence of the newly described human circovirus, TTV, in United States blood donors. Transfusion 2000, 40: 245-251. 10.1046/j.1537-2995.2000.40020245.xPubMedCrossRef Handa A, Dickstein B, Young NS, Brown KE: Prevalence of the newly described human circovirus, TTV, in United States blood donors. Transfusion 2000, 40: 245-251. 10.1046/j.1537-2995.2000.40020245.xPubMedCrossRef
16.
go back to reference Irshad M, Singh S, Irshad K, Agarwal S-K, Joshi Y-K: Torque teno virus: its prevalence and isotypes in North India. World J Gastroenterol 2008, 14: 6044-6051. 10.3748/wjg.14.6044PubMedPubMedCentralCrossRef Irshad M, Singh S, Irshad K, Agarwal S-K, Joshi Y-K: Torque teno virus: its prevalence and isotypes in North India. World J Gastroenterol 2008, 14: 6044-6051. 10.3748/wjg.14.6044PubMedPubMedCentralCrossRef
17.
go back to reference Studier FW: Protein production by auto-induction in high density shaking cultures. Protein Expr Purif 2005, 41: 207-234. 10.1016/j.pep.2005.01.016PubMedCrossRef Studier FW: Protein production by auto-induction in high density shaking cultures. Protein Expr Purif 2005, 41: 207-234. 10.1016/j.pep.2005.01.016PubMedCrossRef
18.
go back to reference Irshad M, Joshi YK, Sharma Y, Dhar I: Transfusion transmitted virus: a review on its molecular characteristics and role in medicine. World J Gastroenterol 2006, 12: 5122-5134.PubMedPubMedCentral Irshad M, Joshi YK, Sharma Y, Dhar I: Transfusion transmitted virus: a review on its molecular characteristics and role in medicine. World J Gastroenterol 2006, 12: 5122-5134.PubMedPubMedCentral
19.
go back to reference Hino S, Miyata H: Torque teno virus (TTV): current status. Rev Med Virol 2007, 17: 45-57. 10.1002/rmv.524PubMedCrossRef Hino S, Miyata H: Torque teno virus (TTV): current status. Rev Med Virol 2007, 17: 45-57. 10.1002/rmv.524PubMedCrossRef
20.
go back to reference Asim M, Singla R, Gupta RK, Kar P: Clinical & molecular characterization of human TT virus in different liver diseases. Indian J Med Res 2010, 131: 545-554.PubMed Asim M, Singla R, Gupta RK, Kar P: Clinical & molecular characterization of human TT virus in different liver diseases. Indian J Med Res 2010, 131: 545-554.PubMed
21.
go back to reference Irshad M, Sharma Y, Dhar I, Singh J, Joshi Y-K: Transfusion-transmitted virus in association with hepatitis A-E viral infections in various forms of liver diseases in India. World J Gastroenterol 2006, 12: 2432-2436.PubMedPubMedCentral Irshad M, Sharma Y, Dhar I, Singh J, Joshi Y-K: Transfusion-transmitted virus in association with hepatitis A-E viral infections in various forms of liver diseases in India. World J Gastroenterol 2006, 12: 2432-2436.PubMedPubMedCentral
22.
go back to reference Irshad M, Mandal K, Singh S, Agarwal SK: Torque teno virus infection in hemodialysis patients in North India. Int Urol Nephrol 2010, 42: 1077-1083. 10.1007/s11255-009-9648-4PubMedCrossRef Irshad M, Mandal K, Singh S, Agarwal SK: Torque teno virus infection in hemodialysis patients in North India. Int Urol Nephrol 2010, 42: 1077-1083. 10.1007/s11255-009-9648-4PubMedCrossRef
23.
go back to reference De Villiers E-M, Bulajic M, Nitsch C, Kecmanovic D, Pavlov M, Kopp-Schneider A, Löhr M: TTV infection in colorectal cancer tissues and normal mucosa. Int J Cancer 2007, 121: 2109-2112. 10.1002/ijc.22931PubMedCrossRef De Villiers E-M, Bulajic M, Nitsch C, Kecmanovic D, Pavlov M, Kopp-Schneider A, Löhr M: TTV infection in colorectal cancer tissues and normal mucosa. Int J Cancer 2007, 121: 2109-2112. 10.1002/ijc.22931PubMedCrossRef
24.
go back to reference Tomasiewicz K, Modrzewska R, Lyczak A, Krawczuk G: TT virus infection and pancreatic cancer: relationship or accidental coexistence. World J Gastroenterol 2005, 11: 2847-2849.PubMedPubMedCentralCrossRef Tomasiewicz K, Modrzewska R, Lyczak A, Krawczuk G: TT virus infection and pancreatic cancer: relationship or accidental coexistence. World J Gastroenterol 2005, 11: 2847-2849.PubMedPubMedCentralCrossRef
25.
go back to reference Momosaki S, Umemura T, Scudamore CH, Kojiro M, Alter HJ, Tabor E: SEN virus infection in patients with hepatocellular carcinoma. J Viral Hepat 2005, 12: 435-438. 10.1111/j.1365-2893.2005.00618.xPubMedCrossRef Momosaki S, Umemura T, Scudamore CH, Kojiro M, Alter HJ, Tabor E: SEN virus infection in patients with hepatocellular carcinoma. J Viral Hepat 2005, 12: 435-438. 10.1111/j.1365-2893.2005.00618.xPubMedCrossRef
26.
go back to reference Szládek G, Juhász A, Kardos G, Szoke K, Major T, Sziklai I, Tar I, Márton I, Kónya J, Gergely L, Szarka K: High co-prevalence of genogroup 1 TT virus and human papillomavirus is associated with poor clinical outcome of laryngeal carcinoma. J Clin Pathol 2005, 58: 402-405. 10.1136/jcp.2004.022103PubMedPubMedCentralCrossRef Szládek G, Juhász A, Kardos G, Szoke K, Major T, Sziklai I, Tar I, Márton I, Kónya J, Gergely L, Szarka K: High co-prevalence of genogroup 1 TT virus and human papillomavirus is associated with poor clinical outcome of laryngeal carcinoma. J Clin Pathol 2005, 58: 402-405. 10.1136/jcp.2004.022103PubMedPubMedCentralCrossRef
27.
go back to reference Chu CC, Zhang L, Dhayalan A, Agagnina BM, Magli AR, Fraher G, Didier S, Johnson LP, Kennedy WJ, Damle RN, Yan X-J, Patten PEM, Teichberg S, Koduru P, Kolitz JE, Allen SL, Rai KR, Chiorazzi N: Torque teno virus 10 isolated by genome amplification techniques from a patient with concomitant chronic lymphocytic leukemia and polycythemia vera. Mol Med 2011, 17: 1338-1348.PubMedPubMedCentralCrossRef Chu CC, Zhang L, Dhayalan A, Agagnina BM, Magli AR, Fraher G, Didier S, Johnson LP, Kennedy WJ, Damle RN, Yan X-J, Patten PEM, Teichberg S, Koduru P, Kolitz JE, Allen SL, Rai KR, Chiorazzi N: Torque teno virus 10 isolated by genome amplification techniques from a patient with concomitant chronic lymphocytic leukemia and polycythemia vera. Mol Med 2011, 17: 1338-1348.PubMedPubMedCentralCrossRef
28.
go back to reference Fehér E, Gáll T, Murvai M, Kis A, Boda R, Sápy T, Tar I, Gergely L, Szarka K: Investigation of the occurrence of torque tenovirus in malignant and potentially malignant disorders associated with human papillomavirus. J Med Virol 2009, 81: 1975-1981. 10.1002/jmv.21627PubMedCrossRef Fehér E, Gáll T, Murvai M, Kis A, Boda R, Sápy T, Tar I, Gergely L, Szarka K: Investigation of the occurrence of torque tenovirus in malignant and potentially malignant disorders associated with human papillomavirus. J Med Virol 2009, 81: 1975-1981. 10.1002/jmv.21627PubMedCrossRef
29.
go back to reference Singh S, Singh A, Mankotia DS, Luthra K, Irshad M: Expression of TTV-ORF2 protein for detection of anti-TTV IgG antibodies in human sera. Adv Infect Dis 2013, 03: 223-229. 10.4236/aid.2013.33033CrossRef Singh S, Singh A, Mankotia DS, Luthra K, Irshad M: Expression of TTV-ORF2 protein for detection of anti-TTV IgG antibodies in human sera. Adv Infect Dis 2013, 03: 223-229. 10.4236/aid.2013.33033CrossRef
30.
go back to reference Lo SY, Peng KF, Ma HC, Yu JH, Li YH, Lin HH, Lua AC, Lee ML: Prevalence of TT virus DNA in eastern Taiwan aborigines. J Med Virol 1999, 59: 198-203. 10.1002/(SICI)1096-9071(199910)59:2<198::AID-JMV12>3.0.CO;2-2PubMedCrossRef Lo SY, Peng KF, Ma HC, Yu JH, Li YH, Lin HH, Lua AC, Lee ML: Prevalence of TT virus DNA in eastern Taiwan aborigines. J Med Virol 1999, 59: 198-203. 10.1002/(SICI)1096-9071(199910)59:2<198::AID-JMV12>3.0.CO;2-2PubMedCrossRef
31.
go back to reference Ansari MA, Irshad M, Agarwal SK, Chosdol K: Expression of the full-length HCV core subgenome from HCV gentoype-1a and genotype-3a and evaluation of the antigenicity of translational products. Eur J Gastroenterol Hepatol 2013, 25: 806-813. 10.1097/MEG.0b013e32835eb9b9PubMedCrossRef Ansari MA, Irshad M, Agarwal SK, Chosdol K: Expression of the full-length HCV core subgenome from HCV gentoype-1a and genotype-3a and evaluation of the antigenicity of translational products. Eur J Gastroenterol Hepatol 2013, 25: 806-813. 10.1097/MEG.0b013e32835eb9b9PubMedCrossRef
32.
go back to reference Laemmli UK: Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227: 680-685. 10.1038/227680a0PubMedCrossRef Laemmli UK: Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970, 227: 680-685. 10.1038/227680a0PubMedCrossRef
33.
go back to reference Towbin H, Staehelin T, Gordon J: Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci USA 1979, 76: 4350-4354. 10.1073/pnas.76.9.4350PubMedPubMedCentralCrossRef Towbin H, Staehelin T, Gordon J: Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci USA 1979, 76: 4350-4354. 10.1073/pnas.76.9.4350PubMedPubMedCentralCrossRef
34.
go back to reference Bradford MM: A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 1976, 72: 248-254. 10.1016/0003-2697(76)90527-3PubMedCrossRef Bradford MM: A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 1976, 72: 248-254. 10.1016/0003-2697(76)90527-3PubMedCrossRef
Metadata
Title
Cloning and expression of N22 region of Torque Teno virus (TTV) genome and use of peptide in developing immunoassay for TTV antibodies
Authors
Dhananjay Singh Mankotia
Mohammad Irshad
Publication date
01-12-2014
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2014
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-11-96

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