Skip to main content
Top
Published in: Clinical and Experimental Medicine 1/2024

Open Access 01-12-2024 | Acute Myeloid Leukemia | Research

Cysteine- and glycine-rich protein 1 predicts prognosis and therapy response in patients with acute myeloid leukemia

Authors: Qianqian Hao, Yu Liu, Yajun Liu, Luyao Shi, Yufei Chen, Lu Yang, Zhongxing Jiang, Yanfang Liu, Chong Wang, Shujuan Wang, Ling Sun

Published in: Clinical and Experimental Medicine | Issue 1/2024

Login to get access

Abstract

Acute myeloid leukemia (AML) is a heterogeneous disease with a poor prognosis. The current risk stratification system is essential but remains insufficient to select the best schedules. Cysteine-rich protein 1 (CSRP1) is a member of the CSRP family and associated with poor clinicopathological features in many tumors. This study aimed to explore the clinical significance and molecular mechanisms of cysteine- and glycine-rich protein 1 (CSRP1) in AML. RT-qPCR was used to detect the relative expression of CSRP1 in our clinical cohort. Functional enrichment analysis of CSRP1-related differentially expressed genes was carried out by GO/KEGG enrichment analysis, immune cell infiltration analysis, and protein–protein interaction (PPI) network. The OncoPredict algorithm was implemented to explore correlations between CSRP1 and drug resistance. CSRP1 was highly expressed in AML compared with normal samples. High CSRP1 expression was an independent poor prognostic factor. Functional enrichment analysis showed neutrophil activation and apoptosis were associated with CSRP1. In the PPI network, 19 genes were present in the most significant module, and 9 of them were correlated with AML prognosis. The high CSRP1 patients showed higher sensitivity to 5-fluorouracil, gemcitabine, rapamycin, cisplatin and lower sensitivity to fludarabine. CSRP1 may serve as a potential prognostic marker and a therapeutic target for AML in the future.
Appendix
Available only for authorised users
Literature
1.
go back to reference Luyao L, Yehuda GA, Zi-Ning L, et al. Genetic biomarkers of drug resistance: a compass of prognosis and targeted therapy in acute myeloid leukemia. Drug Resist Updat. 2020;52:100703.CrossRef Luyao L, Yehuda GA, Zi-Ning L, et al. Genetic biomarkers of drug resistance: a compass of prognosis and targeted therapy in acute myeloid leukemia. Drug Resist Updat. 2020;52:100703.CrossRef
2.
go back to reference Mims AS, Kohlschmidt J, Borate U, et al. A precision medicine classification for treatment of acute myeloid leukemia in older patients. J Hematol Oncol. 2021;14(1):96.PubMedPubMedCentralCrossRef Mims AS, Kohlschmidt J, Borate U, et al. A precision medicine classification for treatment of acute myeloid leukemia in older patients. J Hematol Oncol. 2021;14(1):96.PubMedPubMedCentralCrossRef
3.
go back to reference Ma J, Ge Z. Recent advances of targeted therapy in relapsed/refractory acute myeloid leukemia. Bosn J Basic Med Sci. 2021;21:96. Ma J, Ge Z. Recent advances of targeted therapy in relapsed/refractory acute myeloid leukemia. Bosn J Basic Med Sci. 2021;21:96.
4.
go back to reference Murphy T, Yee KWL. Cytarabine and daunorubicin for the treatment of acute myeloid leukemia. Expert Opin Pharmacother. 2017;18(16):1765–80.PubMedCrossRef Murphy T, Yee KWL. Cytarabine and daunorubicin for the treatment of acute myeloid leukemia. Expert Opin Pharmacother. 2017;18(16):1765–80.PubMedCrossRef
5.
go back to reference Thomas B, Emilie R, Sylvain T, Frederic L. Advances in treatment formulations for acute myeloid leukemia. Drug Discov Today. 2018;23(12):1936–49.CrossRef Thomas B, Emilie R, Sylvain T, Frederic L. Advances in treatment formulations for acute myeloid leukemia. Drug Discov Today. 2018;23(12):1936–49.CrossRef
6.
go back to reference Erdel M, Weiskirchen R. Assignment1 of CSRP1 encoding the LIM domain protein CRP1, to human chromosome 1q32 by fluorescence in situ hybridization. Cytogenet Genome Res. 1998;83(1–2):10–1.CrossRef Erdel M, Weiskirchen R. Assignment1 of CSRP1 encoding the LIM domain protein CRP1, to human chromosome 1q32 by fluorescence in situ hybridization. Cytogenet Genome Res. 1998;83(1–2):10–1.CrossRef
7.
go back to reference Henderson JR, Macalma T, Brown D, Richardson JA, Olson EN, Beckerle MC. The LIM protein, CRP1, is a smooth muscle marker. Dev dyn publ Am Assoc Anat. 1999;214(3):229–38. Henderson JR, Macalma T, Brown D, Richardson JA, Olson EN, Beckerle MC. The LIM protein, CRP1, is a smooth muscle marker. Dev dyn publ Am Assoc Anat. 1999;214(3):229–38.
8.
go back to reference David FC, Narasimhaswamy SB, Dinakar I, et al. Cysteine-rich LIM-only proteins CRP1 and CRP2 are potent smooth muscle differentiation cofactors. Dev Cell. 2003;4(1):107–18.CrossRef David FC, Narasimhaswamy SB, Dinakar I, et al. Cysteine-rich LIM-only proteins CRP1 and CRP2 are potent smooth muscle differentiation cofactors. Dev Cell. 2003;4(1):107–18.CrossRef
9.
go back to reference Thuan CT, Coreyayne S, Tamara SF, Jeffrey AG. Cysteine-rich protein 1 (CRP1) regulates actin filament bundling. BMC Mol Cell Biol. 2005;6(1):45.CrossRef Thuan CT, Coreyayne S, Tamara SF, Jeffrey AG. Cysteine-rich protein 1 (CRP1) regulates actin filament bundling. BMC Mol Cell Biol. 2005;6(1):45.CrossRef
10.
go back to reference Xu F, Zhang P, Yuan M, Yang X, Chong T. Bioinformatic screening and identification of downregulated hub genes in adrenocortical carcinoma. Exp Ther Med. 2020;20(3):2730–42.PubMedPubMedCentral Xu F, Zhang P, Yuan M, Yang X, Chong T. Bioinformatic screening and identification of downregulated hub genes in adrenocortical carcinoma. Exp Ther Med. 2020;20(3):2730–42.PubMedPubMedCentral
11.
go back to reference Hirasawa Y, Arai M, Imazeki F, et al. Methylation status of genes upregulated by demethylating agent 5-aza-2′-deoxycytidine in hepatocellular carcinoma. Oncology. 2006;71(1–2):77–85.PubMedCrossRef Hirasawa Y, Arai M, Imazeki F, et al. Methylation status of genes upregulated by demethylating agent 5-aza-2′-deoxycytidine in hepatocellular carcinoma. Oncology. 2006;71(1–2):77–85.PubMedCrossRef
12.
go back to reference Chen X, Ma J, Xu C, et al. Identification of hub genes predicting the development of prostate cancer from benign prostate hyperplasia and analyzing their clinical value in prostate cancer by bioinformatic analysis. Discov Oncol. 2022;13(1):54.PubMedPubMedCentralCrossRef Chen X, Ma J, Xu C, et al. Identification of hub genes predicting the development of prostate cancer from benign prostate hyperplasia and analyzing their clinical value in prostate cancer by bioinformatic analysis. Discov Oncol. 2022;13(1):54.PubMedPubMedCentralCrossRef
13.
go back to reference Zhou CZ, Qiu GQ, Wang XL, et al. Screening of tumor suppressor genes on 1q31.1–32.1 in Chinese patients with sporadic colorectal cancer. Chin Med J (Engl). 2008;121(24):2479–86.PubMedCrossRef Zhou CZ, Qiu GQ, Wang XL, et al. Screening of tumor suppressor genes on 1q31.1–32.1 in Chinese patients with sporadic colorectal cancer. Chin Med J (Engl). 2008;121(24):2479–86.PubMedCrossRef
14.
go back to reference López-Cortés A, Cabrera-Andrade A, Vázquez-Naya JM, et al. Prediction of breast cancer proteins involved in immunotherapy, metastasis, and RNA-binding using molecular descriptors and artificial neural networks. Sci Rep. 2020;10(1):8515.PubMedPubMedCentralCrossRef López-Cortés A, Cabrera-Andrade A, Vázquez-Naya JM, et al. Prediction of breast cancer proteins involved in immunotherapy, metastasis, and RNA-binding using molecular descriptors and artificial neural networks. Sci Rep. 2020;10(1):8515.PubMedPubMedCentralCrossRef
15.
go back to reference Wang S, Zhang Y, Liu Y, et al. Inhibition of CSRP2 promotes leukemia cell proliferation and correlates with relapse in adults with acute myeloid leukemia. Onco Targets Ther. 2020;13:12549–60.PubMedPubMedCentralCrossRef Wang S, Zhang Y, Liu Y, et al. Inhibition of CSRP2 promotes leukemia cell proliferation and correlates with relapse in adults with acute myeloid leukemia. Onco Targets Ther. 2020;13:12549–60.PubMedPubMedCentralCrossRef
16.
go back to reference Li M, Liu Y, Liu Y, et al. Downregulation of GNA15 inhibits cell proliferation P38 MAPK pathway and correlates with prognosis of adult acute myeloid leukemia with normal karyotype. Front Oncol. 2021;11:724435.PubMedPubMedCentralCrossRef Li M, Liu Y, Liu Y, et al. Downregulation of GNA15 inhibits cell proliferation P38 MAPK pathway and correlates with prognosis of adult acute myeloid leukemia with normal karyotype. Front Oncol. 2021;11:724435.PubMedPubMedCentralCrossRef
17.
go back to reference Döhner H, Estey E, Grimwade D, et al. Diagnosis and management of AML in adults: 2017 ELN recommendations from an international expert panel. Blood. 2017;129(4):424–47.PubMedPubMedCentralCrossRef Döhner H, Estey E, Grimwade D, et al. Diagnosis and management of AML in adults: 2017 ELN recommendations from an international expert panel. Blood. 2017;129(4):424–47.PubMedPubMedCentralCrossRef
18.
go back to reference Shujuan W, Chong W, Weiqiong W, Qianqian H, Yanfang L. High RASD1 transcript levels at diagnosis predicted poor survival in adult B-cell acute lymphoblastic leukemia patients. Leuk Res. 2019;80:26–32.CrossRef Shujuan W, Chong W, Weiqiong W, Qianqian H, Yanfang L. High RASD1 transcript levels at diagnosis predicted poor survival in adult B-cell acute lymphoblastic leukemia patients. Leuk Res. 2019;80:26–32.CrossRef
19.
go back to reference Gabert J, Beillard E, van der Velden VH, et al. Standardization and quality control studies of “real-time” quantitative reverse transcriptase polymerase chain reaction of fusion gene transcripts for residual disease detection in leukemia-a Europe against cancer program. Leukemia. 2003;17(12):2318–57.PubMedCrossRef Gabert J, Beillard E, van der Velden VH, et al. Standardization and quality control studies of “real-time” quantitative reverse transcriptase polymerase chain reaction of fusion gene transcripts for residual disease detection in leukemia-a Europe against cancer program. Leukemia. 2003;17(12):2318–57.PubMedCrossRef
20.
go back to reference Wang SJ, Wang PZ, Gale RP, et al. Cysteine and glycine-rich protein 2 (CSRP2) transcript levels correlate with leukemia relapse and leukemia-free survival in adults with B-cell acute lymphoblastic leukemia and normal cytogenetics. Oncotarget. 2017;8(22):35984–6000.PubMedPubMedCentralCrossRef Wang SJ, Wang PZ, Gale RP, et al. Cysteine and glycine-rich protein 2 (CSRP2) transcript levels correlate with leukemia relapse and leukemia-free survival in adults with B-cell acute lymphoblastic leukemia and normal cytogenetics. Oncotarget. 2017;8(22):35984–6000.PubMedPubMedCentralCrossRef
22.
go back to reference Ley TJ, Miller C, Ding L, et al. Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia. N Engl J Med. 2013;368(22):2059–74.PubMedCrossRef Ley TJ, Miller C, Ding L, et al. Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia. N Engl J Med. 2013;368(22):2059–74.PubMedCrossRef
23.
go back to reference Metzeler KH, Hummel M, Bloomfield CD, et al. An 86-probe-set gene-expression signature predicts survival in cytogenetically normal acute myeloid leukemia. Blood. 2008;112(10):4193–201.PubMedPubMedCentralCrossRef Metzeler KH, Hummel M, Bloomfield CD, et al. An 86-probe-set gene-expression signature predicts survival in cytogenetically normal acute myeloid leukemia. Blood. 2008;112(10):4193–201.PubMedPubMedCentralCrossRef
26.
go back to reference Hanzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-seq data. BMC Bioinform. 2013;14:7.CrossRef Hanzelmann S, Castelo R, Guinney J. GSVA: gene set variation analysis for microarray and RNA-seq data. BMC Bioinform. 2013;14:7.CrossRef
27.
go back to reference Bindea G, Mlecnik B, Tosolini M, et al. Spatiotemporal dynamics of intratumoral immune cells reveal the immune landscape in human cancer. Immunity. 2013;39(4):782–95.PubMedCrossRef Bindea G, Mlecnik B, Tosolini M, et al. Spatiotemporal dynamics of intratumoral immune cells reveal the immune landscape in human cancer. Immunity. 2013;39(4):782–95.PubMedCrossRef
28.
go back to reference Szklarczyk D, Gable AL, Lyon D, et al. STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets. Nucleic Acids Res. 2019;47(D1):D607–13.PubMedCrossRef Szklarczyk D, Gable AL, Lyon D, et al. STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets. Nucleic Acids Res. 2019;47(D1):D607–13.PubMedCrossRef
30.
go back to reference Bandettini WP, Kellman P, Mancini C, MultiContrast, et al. Delayed Enhancement (MCODE) improves detection of subendocardial myocardial infarction by late gadolinium enhancement cardiovascular magnetic resonance: a clinical validation study. J Cardiovasc Magn Reson. 2012;14(1):83.PubMedPubMedCentralCrossRef Bandettini WP, Kellman P, Mancini C, MultiContrast, et al. Delayed Enhancement (MCODE) improves detection of subendocardial myocardial infarction by late gadolinium enhancement cardiovascular magnetic resonance: a clinical validation study. J Cardiovasc Magn Reson. 2012;14(1):83.PubMedPubMedCentralCrossRef
31.
go back to reference Emma COB, John B, Timothy C. DNMT3A: the DioNysian MonsTer of acute myeloid leukaemia. Ther Adv Hematol. 2014;5(6):187–96.CrossRef Emma COB, John B, Timothy C. DNMT3A: the DioNysian MonsTer of acute myeloid leukaemia. Ther Adv Hematol. 2014;5(6):187–96.CrossRef
32.
go back to reference Zhang Q, Wu X, Cao J, Gao F, Huang K. Association between increased mutation rates in DNMT3A and FLT3-ITD and poor prognosis of patients with acute myeloid leukemia. Exp Ther Med. 2019;18(4):7891. Zhang Q, Wu X, Cao J, Gao F, Huang K. Association between increased mutation rates in DNMT3A and FLT3-ITD and poor prognosis of patients with acute myeloid leukemia. Exp Ther Med. 2019;18(4):7891.
34.
go back to reference Garitano TA, Sancho A, Götz R, et al. Actin cytoskeleton deregulation confers midostaurin resistance in FLT3-mutant acute myeloid leukemia. Commun Biol. 2021;4(1):799.CrossRef Garitano TA, Sancho A, Götz R, et al. Actin cytoskeleton deregulation confers midostaurin resistance in FLT3-mutant acute myeloid leukemia. Commun Biol. 2021;4(1):799.CrossRef
35.
go back to reference Yang S, Liu W, Peng J, et al. High expression of RhoBTB3 predicts favorable chemothrapy outcomes in non-M3 acute myeloid leukemia. J Cancer. 2021;12(14):4229–39.PubMedPubMedCentralCrossRef Yang S, Liu W, Peng J, et al. High expression of RhoBTB3 predicts favorable chemothrapy outcomes in non-M3 acute myeloid leukemia. J Cancer. 2021;12(14):4229–39.PubMedPubMedCentralCrossRef
36.
go back to reference Shi L, Huang R, Lai Y. Identification and validation of signal recognition particle 14 as a prognostic biomarker predicting overall survival in patients with acute myeloid leukemia. BMC Med Genomics. 2021;14(1):127.PubMedPubMedCentralCrossRef Shi L, Huang R, Lai Y. Identification and validation of signal recognition particle 14 as a prognostic biomarker predicting overall survival in patients with acute myeloid leukemia. BMC Med Genomics. 2021;14(1):127.PubMedPubMedCentralCrossRef
37.
go back to reference Wu J, Niu Q, Yuan J, Xu X, Cao L. Novel compound cedrelone inhibits hepatocellular carcinoma progression via PBLD and Ras/Rap1. Exp Ther Med. 2019;18(6):4209–20.PubMedPubMedCentral Wu J, Niu Q, Yuan J, Xu X, Cao L. Novel compound cedrelone inhibits hepatocellular carcinoma progression via PBLD and Ras/Rap1. Exp Ther Med. 2019;18(6):4209–20.PubMedPubMedCentral
38.
go back to reference Ho PA, Alonzo TA, Kopecky KJ, et al. Molecular alterations of the IDH1 gene in AML: a children’s oncology group and Southwest oncology group study. Leukemia. 2010;24(5):909–13.PubMedPubMedCentralCrossRef Ho PA, Alonzo TA, Kopecky KJ, et al. Molecular alterations of the IDH1 gene in AML: a children’s oncology group and Southwest oncology group study. Leukemia. 2010;24(5):909–13.PubMedPubMedCentralCrossRef
39.
go back to reference Zhu X, Guo Q, Zhu M, et al. HLX affects cell cycle and proliferation in AML cells via the JAK/STAT signaling pathway. Oncol Lett. 2020;20(2):1888–96.PubMedPubMedCentralCrossRef Zhu X, Guo Q, Zhu M, et al. HLX affects cell cycle and proliferation in AML cells via the JAK/STAT signaling pathway. Oncol Lett. 2020;20(2):1888–96.PubMedPubMedCentralCrossRef
40.
go back to reference Bachli EB, Schaer DJ, Walter RB, Fehr J, Schoedon G. Functional expression of the CD163 scavenger receptor on acute myeloid leukemia cells of monocytic lineage. J Leukoc Biol. 2006;79(2):312–8.PubMedCrossRef Bachli EB, Schaer DJ, Walter RB, Fehr J, Schoedon G. Functional expression of the CD163 scavenger receptor on acute myeloid leukemia cells of monocytic lineage. J Leukoc Biol. 2006;79(2):312–8.PubMedCrossRef
41.
go back to reference Hwang I, Kim JW, Ylaya K, et al. Tumor-associated macrophage, angiogenesis and lymphangiogenesis markers predict prognosis of non-small cell lung cancer patients. J Transl Med. 2020;18(1):443.PubMedPubMedCentralCrossRef Hwang I, Kim JW, Ylaya K, et al. Tumor-associated macrophage, angiogenesis and lymphangiogenesis markers predict prognosis of non-small cell lung cancer patients. J Transl Med. 2020;18(1):443.PubMedPubMedCentralCrossRef
42.
go back to reference Zhu L, Li Q, Wang X, et al. THBS1 Is a novel serum prognostic factors of acute myeloid leukemia. Front Oncol. 2019;9:1567.PubMedCrossRef Zhu L, Li Q, Wang X, et al. THBS1 Is a novel serum prognostic factors of acute myeloid leukemia. Front Oncol. 2019;9:1567.PubMedCrossRef
43.
go back to reference Coustan-Smith E, Song G, Shurtleff S, et al. Universal monitoring of minimal residual disease in acute myeloid leukemia. JCI insight. 2018;3(9):e98561.PubMedPubMedCentralCrossRef Coustan-Smith E, Song G, Shurtleff S, et al. Universal monitoring of minimal residual disease in acute myeloid leukemia. JCI insight. 2018;3(9):e98561.PubMedPubMedCentralCrossRef
44.
go back to reference Jimbu L, Mesaros O, Neaga A, et al. The potential advantage of targeting both PD-L1/PD-L2/PD-1 and IL-10–IL-10R pathways in acute myeloid leukemia. Pharm (Basel Switz). 2021;14(11):1105. Jimbu L, Mesaros O, Neaga A, et al. The potential advantage of targeting both PD-L1/PD-L2/PD-1 and IL-10–IL-10R pathways in acute myeloid leukemia. Pharm (Basel Switz). 2021;14(11):1105.
45.
go back to reference Dan H, Guohuan S, Xiaoxin H, et al. ANGPTL2-containing small extracellular vesicles from vascular endothelial cells accelerate leukemia progression. J Clin Investig. 2021;131(1):e138986.CrossRef Dan H, Guohuan S, Xiaoxin H, et al. ANGPTL2-containing small extracellular vesicles from vascular endothelial cells accelerate leukemia progression. J Clin Investig. 2021;131(1):e138986.CrossRef
Metadata
Title
Cysteine- and glycine-rich protein 1 predicts prognosis and therapy response in patients with acute myeloid leukemia
Authors
Qianqian Hao
Yu Liu
Yajun Liu
Luyao Shi
Yufei Chen
Lu Yang
Zhongxing Jiang
Yanfang Liu
Chong Wang
Shujuan Wang
Ling Sun
Publication date
01-12-2024
Publisher
Springer International Publishing
Published in
Clinical and Experimental Medicine / Issue 1/2024
Print ISSN: 1591-8890
Electronic ISSN: 1591-9528
DOI
https://doi.org/10.1007/s10238-023-01269-w

Other articles of this Issue 1/2024

Clinical and Experimental Medicine 1/2024 Go to the issue
Obesity Clinical Trial Summary

At a glance: The STEP trials

A round-up of the STEP phase 3 clinical trials evaluating semaglutide for weight loss in people with overweight or obesity.

Developed by: Springer Medicine

Highlights from the ACC 2024 Congress

Year in Review: Pediatric cardiology

Watch Dr. Anne Marie Valente present the last year's highlights in pediatric and congenital heart disease in the official ACC.24 Year in Review session.

Year in Review: Pulmonary vascular disease

The last year's highlights in pulmonary vascular disease are presented by Dr. Jane Leopold in this official video from ACC.24.

Year in Review: Valvular heart disease

Watch Prof. William Zoghbi present the last year's highlights in valvular heart disease from the official ACC.24 Year in Review session.

Year in Review: Heart failure and cardiomyopathies

Watch this official video from ACC.24. Dr. Biykem Bozkurt discuss last year's major advances in heart failure and cardiomyopathies.