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Published in: Virology Journal 1/2016

Open Access 01-12-2016 | Short report

The complete genome of the tospovirus Zucchini lethal chlorosis virus

Authors: R. N. Lima, A. S. De Oliveira, M. O. Leastro, R. Blawid, T. Nagata, R. O. Resende, F. L. Melo

Published in: Virology Journal | Issue 1/2016

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Abstract

Background

Zucchini lethal chlorosis virus (ZLCV) causes significant losses in the production of cucurbits in Brazil. This virus belongs to the genus Tospovirus (family Bunyaviridae) and seems to be exclusively transmitted by Frankliniella zucchini (Thysanoptera). Tospoviruses have a tripartite and single-stranded RNA genome classified as S (Small), M (Medium) and L (Large) RNAS. Although ZLCV was identified as a member of the genus Tospovirus in 1999, its complete genome had not been sequenced until now.

Findings

We sequenced the full-length genome of two ZLCV isolates named ZLCV-SP and ZLCV-DF. The phylogenetic analysis showed that ZLCV-SP and ZLCV-DF clustered with the previously reported isolate ZLCV-BR09. Their proteins were closely related, except the non-structural protein (NSm), which was highly divergent (approximately 90 % identity). All viral proteins clustered similarly in our phylogenetic analysis, excluding that these ZLCV isolates have originated from reassortment events of different tospovirus species.

Conclusion

Here we report for the first time the complete genome of two ZLCV isolates that were found in the field infecting zucchini and cucumber.
Appendix
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Metadata
Title
The complete genome of the tospovirus Zucchini lethal chlorosis virus
Authors
R. N. Lima
A. S. De Oliveira
M. O. Leastro
R. Blawid
T. Nagata
R. O. Resende
F. L. Melo
Publication date
01-12-2016
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2016
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/s12985-016-0577-4

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