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Published in: European Journal of Clinical Microbiology & Infectious Diseases 7/2023

09-05-2023 | Streptococci | Brief Report

Group B streptococci (GBS) strains evading molecular diagnostics showed novel chromosomal deletions encompassing the CAMP-factor (cfb) encoding gene

Authors: Roberta Creti, Monica Imperi, Andrea Stanziale, Giorgia Giuliani, Paolo Fazii, Vincenzo Savini

Published in: European Journal of Clinical Microbiology & Infectious Diseases | Issue 7/2023

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Abstract

A highly conserved fragment adjacent to the cfb gene encoding the CAMP factor is the target of PCR-based molecular diagnostic systems for the identification of S. agalactiae (group B streptococci (GBS)). Six PCR-negative, culture-positive GBS strains were whole genome sequenced to assess why they escaped molecular diagnostics. GBS strains did not constitute a clonal cluster and presented variably sized chromosomal deletions (from 7 to 33 kb) which always included the cfb gene, a finding never described before. GBS strains that escape molecular diagnostics are considered rare; however, they can cause false-negative results using molecular diagnostics alone, affecting medical decisions.
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Literature
1.
go back to reference Smith JP, Durfee KK, Marymont JH Jr (1979) A review of laboratory methods for identification of group B streptococci (Streptococcus agalactiae). Am J Med Technol 45(3):199–204PubMed Smith JP, Durfee KK, Marymont JH Jr (1979) A review of laboratory methods for identification of group B streptococci (Streptococcus agalactiae). Am J Med Technol 45(3):199–204PubMed
3.
go back to reference Ke D, Menard C, Picard FJ, Boissinot M, Ouellette M, Roy PH, Bergeron MG (2000) Development of conventional and real-time PCR assays for the rapid detection of group B streptococci. Clin Chem 46(3):324–331CrossRefPubMed Ke D, Menard C, Picard FJ, Boissinot M, Ouellette M, Roy PH, Bergeron MG (2000) Development of conventional and real-time PCR assays for the rapid detection of group B streptococci. Clin Chem 46(3):324–331CrossRefPubMed
5.
go back to reference Savini V, Marrollo R, De Filippis R, D'Incecco E, Imperi M, Pataracchia M, Alfarone G, Fusilli P, Coclite E, D'Incecco C, Fazii P, Creti R (2016) CAMP-negative group B Streptococcus went unrecognized with Cepheid GeneXpert but was detected by Liofilchem® chromatic StrepB. Int J Clin Exp Pathol 9(11):12017–12020 Savini V, Marrollo R, De Filippis R, D'Incecco E, Imperi M, Pataracchia M, Alfarone G, Fusilli P, Coclite E, D'Incecco C, Fazii P, Creti R (2016) CAMP-negative group B Streptococcus went unrecognized with Cepheid GeneXpert but was detected by Liofilchem® chromatic StrepB. Int J Clin Exp Pathol 9(11):12017–12020
6.
11.
go back to reference Hassan AA, Abdulmawjood A, Yildirim AO, Fink K, Lämmler C, Schlenstedt R (2000) Identification of streptococci isolated from various sources by determination of cfb gene and other CAMP-factor genes. Can J Microbiol 46(10):946–951CrossRefPubMed Hassan AA, Abdulmawjood A, Yildirim AO, Fink K, Lämmler C, Schlenstedt R (2000) Identification of streptococci isolated from various sources by determination of cfb gene and other CAMP-factor genes. Can J Microbiol 46(10):946–951CrossRefPubMed
14.
go back to reference Evans JJ, Bohnsack JF, Klesius PH, Whiting AA, Garcia JC, Shoemaker CA, Takahashi S (2008) Phylogenetic relationships among Streptococcus agalactiae isolated from piscine, dolphin, bovine and human sources: a dolphin and piscine lineage associated with a fish epidemic in Kuwait is also associated with human neonatal infections in Japan. J Med Microbiol 57(11):1369–1376. https://doi.org/10.1099/jmm.0.47815-0CrossRefPubMed Evans JJ, Bohnsack JF, Klesius PH, Whiting AA, Garcia JC, Shoemaker CA, Takahashi S (2008) Phylogenetic relationships among Streptococcus agalactiae isolated from piscine, dolphin, bovine and human sources: a dolphin and piscine lineage associated with a fish epidemic in Kuwait is also associated with human neonatal infections in Japan. J Med Microbiol 57(11):1369–1376. https://​doi.​org/​10.​1099/​jmm.​0.​47815-0CrossRefPubMed
Metadata
Title
Group B streptococci (GBS) strains evading molecular diagnostics showed novel chromosomal deletions encompassing the CAMP-factor (cfb) encoding gene
Authors
Roberta Creti
Monica Imperi
Andrea Stanziale
Giorgia Giuliani
Paolo Fazii
Vincenzo Savini
Publication date
09-05-2023
Publisher
Springer Berlin Heidelberg
Keyword
Streptococci
Published in
European Journal of Clinical Microbiology & Infectious Diseases / Issue 7/2023
Print ISSN: 0934-9723
Electronic ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-023-04620-x

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