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Published in: Virology Journal 1/2015

Open Access 01-12-2015 | Research

Rhinovirus is an important pathogen in upper and lower respiratory tract infections in Mexican children

Authors: Fernando E Aponte, Blanca Taboada, Marco A Espinoza, María A Arias-Ortiz, Jesús Monge-Martínez, Rubén Rodríguez-Vázquez, Fidel Díaz-Hernández, Fernando Zárate-Vidal, Rosa María Wong-Chew, Verónica Firo-Reyes, Carlos N del Río-Almendárez, Jesús Gaitán-Meza, Alberto Villaseñor-Sierra, Gerardo Martínez-Aguilar, Maricela García-Borjas, Daniel E Noyola, Luis F Pérez-Gónzalez, Susana López, José I Santos-Preciado, Carlos F Arias

Published in: Virology Journal | Issue 1/2015

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Abstract

Background

Most of the studies characterizing the incidence of rhinovirus (RV) have been carried out in hospitalized children and in developed countries. In those studies, RV-C has been associated with more severe respiratory tract infections than RV species A and B. In this study we determined the frequency and diversity of RV strains associated with upper and lower respiratory tract infections (URTI, LRTI) in Mexico, and describe the clinical characteristics of the illness associated with different RV species.

Methods

A prospective surveillance of 526 and 250 children with URTI and LRTI was carried out. Respiratory samples were analyzed by RT-PCR for viruses. The 5′ untranslated region of the RV genome was amplified and sequenced.

Results

In the case of URTI, 17.5% were positive for RV, while this virus was found in 24.8% of LRTI. The RV species was determined in 73 children with URTI: 61.6% were RV-A, 37% RV-C and, 1.4% RV-B; and in 43 children with LRTI: 51.2% were RV-A, 41.8% RV-C, and 7% RV-B. No significant differences in clinical characteristics were found in patients with RV-A or RV-C infections. A high genetic diversity of RV strains was found in both URTI and LRTI.

Conclusions

Both RV-A and RV-C species were frequently found in hospitalized as well as in outpatient children. This study underlines the high prevalence and genetic diversity of RV strains in Mexico and the potential severity of disease associated with RV-A and RV-C infections.
Literature
1.
go back to reference Black RE, Cousens S, Johnson HL, Lawn JE, Rudan I, Bassani DG, et al. Global, regional, and national causes of child mortality in 2008: a systematic analysis. Lancet. 2010;375:1969–87.CrossRefPubMed Black RE, Cousens S, Johnson HL, Lawn JE, Rudan I, Bassani DG, et al. Global, regional, and national causes of child mortality in 2008: a systematic analysis. Lancet. 2010;375:1969–87.CrossRefPubMed
2.
3.
go back to reference Gern JE PA. Rhinoviruses. In: David M, Knipe PMH, editors. Fields Virology, vol. 1. Philadelphia: Wolters Kluger/Lippincott Williams & Wilkins; 2013. p. 531–49. Gern JE PA. Rhinoviruses. In: David M, Knipe PMH, editors. Fields Virology, vol. 1. Philadelphia: Wolters Kluger/Lippincott Williams & Wilkins; 2013. p. 531–49.
5.
6.
go back to reference Palmenberg AC, Spiro D, Kuzmickas R, Wang S, Djikeng A, Rathe JA, et al. Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. Science. 2009;324:55–9.CrossRefPubMedCentralPubMed Palmenberg AC, Spiro D, Kuzmickas R, Wang S, Djikeng A, Rathe JA, et al. Sequencing and analyses of all known human rhinovirus genomes reveal structure and evolution. Science. 2009;324:55–9.CrossRefPubMedCentralPubMed
7.
go back to reference Lau SK, Yip CC, Tsoi HW, Lee RA, So LY, Lau YL, et al. Clinical features and complete genome characterization of a distinct human rhinovirus (HRV) genetic cluster, probably representing a previously undetected HRV species, HRV-C, associated with acute respiratory illness in children. J Clin Microbiol. 2007;45:3655–64.CrossRefPubMedCentralPubMed Lau SK, Yip CC, Tsoi HW, Lee RA, So LY, Lau YL, et al. Clinical features and complete genome characterization of a distinct human rhinovirus (HRV) genetic cluster, probably representing a previously undetected HRV species, HRV-C, associated with acute respiratory illness in children. J Clin Microbiol. 2007;45:3655–64.CrossRefPubMedCentralPubMed
8.
go back to reference Lee WM, Kiesner C, Pappas T, Lee I, Grindle K, Jartti T, et al. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants. PLoS One. 2007;2:e966.CrossRefPubMedCentralPubMed Lee WM, Kiesner C, Pappas T, Lee I, Grindle K, Jartti T, et al. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants. PLoS One. 2007;2:e966.CrossRefPubMedCentralPubMed
9.
go back to reference McErlean P, Shackelton LA, Lambert SB, Nissen MD, Sloots TP, Mackay IM. Characterisation of a newly identified human rhinovirus, HRV-QPM, discovered in infants with bronchiolitis. J Clin Virol. 2007;39:67–75.CrossRefPubMed McErlean P, Shackelton LA, Lambert SB, Nissen MD, Sloots TP, Mackay IM. Characterisation of a newly identified human rhinovirus, HRV-QPM, discovered in infants with bronchiolitis. J Clin Virol. 2007;39:67–75.CrossRefPubMed
10.
go back to reference Mubareka S, Louie L, Wong H, Granados A, Chong S, Luinstra K, et al. Co-circulation of multiple genotypes of human rhinovirus during a large outbreak of respiratory illness in a veterans’ long-term care home. J Clin Virol. 2013;58:455–60.CrossRefPubMed Mubareka S, Louie L, Wong H, Granados A, Chong S, Luinstra K, et al. Co-circulation of multiple genotypes of human rhinovirus during a large outbreak of respiratory illness in a veterans’ long-term care home. J Clin Virol. 2013;58:455–60.CrossRefPubMed
11.
go back to reference Calvo C, Casas I, Garcia-Garcia ML, Pozo F, Reyes N, Cruz N, et al. Role of rhinovirus C respiratory infections in sick and healthy children in Spain. Pediatr Infect Dis J. 2010;29:717–20.CrossRefPubMed Calvo C, Casas I, Garcia-Garcia ML, Pozo F, Reyes N, Cruz N, et al. Role of rhinovirus C respiratory infections in sick and healthy children in Spain. Pediatr Infect Dis J. 2010;29:717–20.CrossRefPubMed
13.
go back to reference Khetsuriani N, Lu X, Teague WG, Kazerouni N, Anderson LJ, Erdman DD. Novel human rhinoviruses and exacerbation of asthma in children. Emerg Infect Dis. 2008;14:1793–6.CrossRefPubMedCentralPubMed Khetsuriani N, Lu X, Teague WG, Kazerouni N, Anderson LJ, Erdman DD. Novel human rhinoviruses and exacerbation of asthma in children. Emerg Infect Dis. 2008;14:1793–6.CrossRefPubMedCentralPubMed
14.
go back to reference Lauinger IL, Bible JM, Halligan EP, Bangalore H, Tosas O, Aarons EJ, et al. Patient characteristics and severity of human rhinovirus infections in children. J Clin Virol. 2013;58:216–20.CrossRefPubMed Lauinger IL, Bible JM, Halligan EP, Bangalore H, Tosas O, Aarons EJ, et al. Patient characteristics and severity of human rhinovirus infections in children. J Clin Virol. 2013;58:216–20.CrossRefPubMed
15.
go back to reference Linder JE, Kraft DC, Mohamed Y, Lu Z, Heil L, Tollefson S, et al. Human rhinovirus C: Age, season, and lower respiratory illness over the past 3 decades. J Allergy Clin Immunol. 2013;131:69–77. e61-66.CrossRefPubMedCentralPubMed Linder JE, Kraft DC, Mohamed Y, Lu Z, Heil L, Tollefson S, et al. Human rhinovirus C: Age, season, and lower respiratory illness over the past 3 decades. J Allergy Clin Immunol. 2013;131:69–77. e61-66.CrossRefPubMedCentralPubMed
16.
go back to reference Miller EK, Edwards KM, Weinberg GA, Iwane MK, Griffin MR, Hall CB, et al. A novel group of rhinoviruses is associated with asthma hospitalizations. J Allergy Clin Immunol. 2009;123:98–104.CrossRefPubMed Miller EK, Edwards KM, Weinberg GA, Iwane MK, Griffin MR, Hall CB, et al. A novel group of rhinoviruses is associated with asthma hospitalizations. J Allergy Clin Immunol. 2009;123:98–104.CrossRefPubMed
17.
go back to reference Garcia J, Espejo V, Nelson M, Sovero M, Villaran MV, Gomez J, et al. Human rhinoviruses and enteroviruses in influenza-like illness in Latin America. Virol J. 2013;10:305.CrossRefPubMedCentralPubMed Garcia J, Espejo V, Nelson M, Sovero M, Villaran MV, Gomez J, et al. Human rhinoviruses and enteroviruses in influenza-like illness in Latin America. Virol J. 2013;10:305.CrossRefPubMedCentralPubMed
18.
go back to reference Han TH, Chung JY, Hwang ES, Koo JW. Detection of human rhinovirus C in children with acute lower respiratory tract infections in South Korea. Arch Virol. 2009;154:987–91.CrossRefPubMed Han TH, Chung JY, Hwang ES, Koo JW. Detection of human rhinovirus C in children with acute lower respiratory tract infections in South Korea. Arch Virol. 2009;154:987–91.CrossRefPubMed
19.
go back to reference Iwane MK, Prill MM, Lu X, Miller EK, Edwards KM, Hall CB, et al. Human rhinovirus species associated with hospitalizations for acute respiratory illness in young US children. J Infect Dis. 2011;204:1702–10.CrossRefPubMed Iwane MK, Prill MM, Lu X, Miller EK, Edwards KM, Hall CB, et al. Human rhinovirus species associated with hospitalizations for acute respiratory illness in young US children. J Infect Dis. 2011;204:1702–10.CrossRefPubMed
20.
go back to reference Xiang Z, Gonzalez R, Xie Z, Xiao Y, Liu J, Chen L, et al. Human rhinovirus C infections mirror those of human rhinovirus A in children with community-acquired pneumonia. J Clin Virol. 2010;49:94–9.CrossRefPubMed Xiang Z, Gonzalez R, Xie Z, Xiao Y, Liu J, Chen L, et al. Human rhinovirus C infections mirror those of human rhinovirus A in children with community-acquired pneumonia. J Clin Virol. 2010;49:94–9.CrossRefPubMed
21.
go back to reference McIntyre CL, Knowles NJ, Simmonds P. Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types. J Gen Virol. 2013;94:1791–806.CrossRefPubMedCentralPubMed McIntyre CL, Knowles NJ, Simmonds P. Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types. J Gen Virol. 2013;94:1791–806.CrossRefPubMedCentralPubMed
22.
go back to reference Makela MJ, Puhakka T, Ruuskanen O, Leinonen M, Saikku P, Kimpimaki M, et al. Viruses and bacteria in the etiology of the common cold. J Clin Microbiol. 1998;36:539–42.PubMedCentralPubMed Makela MJ, Puhakka T, Ruuskanen O, Leinonen M, Saikku P, Kimpimaki M, et al. Viruses and bacteria in the etiology of the common cold. J Clin Microbiol. 1998;36:539–42.PubMedCentralPubMed
23.
go back to reference Calvo C, Garcia-Garcia ML, Blanco C, Vazquez MC, Frias ME, Perez-Brena P, et al. Multiple simultaneous viral infections in infants with acute respiratory tract infections in Spain. J Clin Virol. 2008;42:268–72.CrossRefPubMed Calvo C, Garcia-Garcia ML, Blanco C, Vazquez MC, Frias ME, Perez-Brena P, et al. Multiple simultaneous viral infections in infants with acute respiratory tract infections in Spain. J Clin Virol. 2008;42:268–72.CrossRefPubMed
24.
go back to reference Jennings LC, Anderson TP, Werno AM, Beynon KA, Murdoch DR. Viral etiology of acute respiratory tract infections in children presenting to hospital: role of polymerase chain reaction and demonstration of multiple infections. Pediatr Infect Dis J. 2004;23:1003–7.CrossRefPubMed Jennings LC, Anderson TP, Werno AM, Beynon KA, Murdoch DR. Viral etiology of acute respiratory tract infections in children presenting to hospital: role of polymerase chain reaction and demonstration of multiple infections. Pediatr Infect Dis J. 2004;23:1003–7.CrossRefPubMed
25.
go back to reference Midulla F, Scagnolari C, Bonci E, Pierangeli A, Antonelli G, De Angelis D, et al. Respiratory syncytial virus, human bocavirus and rhinovirus bronchiolitis in infants. Arch Dis Child. 2010;95:35–41.CrossRefPubMed Midulla F, Scagnolari C, Bonci E, Pierangeli A, Antonelli G, De Angelis D, et al. Respiratory syncytial virus, human bocavirus and rhinovirus bronchiolitis in infants. Arch Dis Child. 2010;95:35–41.CrossRefPubMed
26.
go back to reference Murdoch DR, O’Brien KL, Scott JA, Karron RA, Bhat N, Driscoll AJ, et al. Breathing new life into pneumonia diagnostics. J Clin Microbiol. 2009;47:3405–8.CrossRefPubMedCentralPubMed Murdoch DR, O’Brien KL, Scott JA, Karron RA, Bhat N, Driscoll AJ, et al. Breathing new life into pneumonia diagnostics. J Clin Microbiol. 2009;47:3405–8.CrossRefPubMedCentralPubMed
27.
go back to reference Fry AM, Lu X, Olsen SJ, Chittaganpitch M, Sawatwong P, Chantra S, et al. Human rhinovirus infections in rural Thailand: epidemiological evidence for rhinovirus as both pathogen and bystander. PLoS One. 2011;6:e17780.CrossRefPubMedCentralPubMed Fry AM, Lu X, Olsen SJ, Chittaganpitch M, Sawatwong P, Chantra S, et al. Human rhinovirus infections in rural Thailand: epidemiological evidence for rhinovirus as both pathogen and bystander. PLoS One. 2011;6:e17780.CrossRefPubMedCentralPubMed
28.
go back to reference Jartti T, Lehtinen P, Vuorinen T, Koskenvuo M, Ruuskanen O. Persistence of rhinovirus and enterovirus RNA after acute respiratory illness in children. J Med Virol. 2004;72:695–9.CrossRefPubMed Jartti T, Lehtinen P, Vuorinen T, Koskenvuo M, Ruuskanen O. Persistence of rhinovirus and enterovirus RNA after acute respiratory illness in children. J Med Virol. 2004;72:695–9.CrossRefPubMed
29.
go back to reference Kusel MM, de Klerk NH, Holt PG, Kebadze T, Johnston SL, Sly PD. Role of respiratory viruses in acute upper and lower respiratory tract illness in the first year of life: a birth cohort study. Pediatr Infect Dis J. 2006;25:680–6.CrossRefPubMed Kusel MM, de Klerk NH, Holt PG, Kebadze T, Johnston SL, Sly PD. Role of respiratory viruses in acute upper and lower respiratory tract illness in the first year of life: a birth cohort study. Pediatr Infect Dis J. 2006;25:680–6.CrossRefPubMed
30.
go back to reference Piotrowska Z, Vazquez M, Shapiro ED, Weibel C, Ferguson D, Landry ML, et al. Rhinoviruses are a major cause of wheezing and hospitalization in children less than 2 years of age. Pediatr Infect Dis J. 2009;28:25–9.CrossRefPubMed Piotrowska Z, Vazquez M, Shapiro ED, Weibel C, Ferguson D, Landry ML, et al. Rhinoviruses are a major cause of wheezing and hospitalization in children less than 2 years of age. Pediatr Infect Dis J. 2009;28:25–9.CrossRefPubMed
31.
go back to reference Singleton RJ, Bulkow LR, Miernyk K, DeByle C, Pruitt L, Hummel KB, et al. Viral respiratory infections in hospitalized and community control children in Alaska. J Med Virol. 2010;82:1282–90.CrossRefPubMed Singleton RJ, Bulkow LR, Miernyk K, DeByle C, Pruitt L, Hummel KB, et al. Viral respiratory infections in hospitalized and community control children in Alaska. J Med Virol. 2010;82:1282–90.CrossRefPubMed
32.
go back to reference Wisdom A, Kutkowska AE, McWilliam Leitch EC, Gaunt E, Templeton K, Harvala H, et al. Genetics, recombination and clinical features of human rhinovirus species C (HRV-C) infections; interactions of HRV-C with other respiratory viruses. PLoS One. 2009;4:e8518.CrossRefPubMedCentralPubMed Wisdom A, Kutkowska AE, McWilliam Leitch EC, Gaunt E, Templeton K, Harvala H, et al. Genetics, recombination and clinical features of human rhinovirus species C (HRV-C) infections; interactions of HRV-C with other respiratory viruses. PLoS One. 2009;4:e8518.CrossRefPubMedCentralPubMed
33.
go back to reference Estes MK, Greenberg HB. Rotaviruses. In: Knipe DM, Howley PM, editors. Fields Virology, vol. 1. 6th ed. Philadelphia: Wolters Kluwer/Lippincott Williams & Wilkins; 2013. p. 1347–401. Estes MK, Greenberg HB. Rotaviruses. In: Knipe DM, Howley PM, editors. Fields Virology, vol. 1. 6th ed. Philadelphia: Wolters Kluwer/Lippincott Williams & Wilkins; 2013. p. 1347–401.
34.
go back to reference Miller EK, Williams JV, Gebretsadik T, Carroll KN, Dupont WD, Mohamed YA, et al. Host and viral factors associated with severity of human rhinovirus-associated infant respiratory tract illness. J Allergy Clin Immunol. 2011;127:883–91.CrossRefPubMedCentralPubMed Miller EK, Williams JV, Gebretsadik T, Carroll KN, Dupont WD, Mohamed YA, et al. Host and viral factors associated with severity of human rhinovirus-associated infant respiratory tract illness. J Allergy Clin Immunol. 2011;127:883–91.CrossRefPubMedCentralPubMed
35.
go back to reference Hayden FG, Turner RB. Rhinovirus genetics and virulence: looking for needles in a haystack. Am J Respir Crit Care Med. 2012;186:818–20.CrossRefPubMed Hayden FG, Turner RB. Rhinovirus genetics and virulence: looking for needles in a haystack. Am J Respir Crit Care Med. 2012;186:818–20.CrossRefPubMed
36.
go back to reference Monto AS, Cavallaro JJ. The Tecumseh study of respiratory illness. IV. Prevalence of rhinovirus serotypes, 1966–1969. Am J Epidemiol. 1972;96:352–60.PubMed Monto AS, Cavallaro JJ. The Tecumseh study of respiratory illness. IV. Prevalence of rhinovirus serotypes, 1966–1969. Am J Epidemiol. 1972;96:352–60.PubMed
37.
go back to reference Kiang D, Kalra I, Yagi S, Louie JK, Boushey H, Boothby J, et al. Assay for 5′ noncoding region analysis of all human rhinovirus prototype strains. J Clin Microbiol. 2008;46:3736–45.CrossRefPubMedCentralPubMed Kiang D, Kalra I, Yagi S, Louie JK, Boushey H, Boothby J, et al. Assay for 5′ noncoding region analysis of all human rhinovirus prototype strains. J Clin Microbiol. 2008;46:3736–45.CrossRefPubMedCentralPubMed
Metadata
Title
Rhinovirus is an important pathogen in upper and lower respiratory tract infections in Mexican children
Authors
Fernando E Aponte
Blanca Taboada
Marco A Espinoza
María A Arias-Ortiz
Jesús Monge-Martínez
Rubén Rodríguez-Vázquez
Fidel Díaz-Hernández
Fernando Zárate-Vidal
Rosa María Wong-Chew
Verónica Firo-Reyes
Carlos N del Río-Almendárez
Jesús Gaitán-Meza
Alberto Villaseñor-Sierra
Gerardo Martínez-Aguilar
Maricela García-Borjas
Daniel E Noyola
Luis F Pérez-Gónzalez
Susana López
José I Santos-Preciado
Carlos F Arias
Publication date
01-12-2015
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2015
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/s12985-015-0262-z

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