Skip to main content
Top
Published in: BMC Medicine 1/2019

Open Access 01-12-2019 | Diphtheria | Research article

Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh

Authors: Flavio Finger, Sebastian Funk, Kate White, M. Ruby Siddiqui, W. John Edmunds, Adam J. Kucharski

Published in: BMC Medicine | Issue 1/2019

Login to get access

Abstract

Background

Between August and December 2017, more than 625,000 Rohingya from Myanmar fled into Bangladesh, settling in informal makeshift camps in Cox’s Bazar district and joining 212,000 Rohingya already present. In early November, a diphtheria outbreak hit the camps, with 440 reported cases during the first month. A rise in cases during early December led to a collaboration between teams from Médecins sans Frontières—who were running a provisional diphtheria treatment centre—and the London School of Hygiene and Tropical Medicine with the goal to use transmission dynamic models to forecast the potential scale of the outbreak and the resulting resource needs.

Methods

We first adjusted for delays between symptom onset and case presentation using the observed distribution of reporting delays from previously reported cases. We then fit a compartmental transmission model to the adjusted incidence stratified by age group and location. Model forecasts with a lead time of 2 weeks were issued on 12, 20, 26 and 30 December and communicated to decision-makers.

Results

The first forecast estimated that the outbreak would peak on 19 December in Balukhali camp with 303 (95% posterior predictive interval 122–599) cases and would continue to grow in Kutupalong camp, requiring a bed capacity of 316 (95% posterior predictive interval (PPI) 197–499). On 19 December, a total of 54 cases were reported, lower than forecasted. Subsequent forecasts were more accurate: on 20 December, we predicted a total of 912 cases (95% PPI 367–2183) and 136 (95% PPI 55–327) hospitalizations until the end of the year, with 616 cases actually reported during this period.

Conclusions

Real-time modelling enabled feedback of key information about the potential scale of the epidemic, resource needs and mechanisms of transmission to decision-makers at a time when this information was largely unknown. By 20 December, the model generated reliable forecasts and helped support decision-making on operational aspects of the outbreak response, such as hospital bed and staff needs, and with advocacy for control measures. Although modelling is only one component of the evidence base for decision-making in outbreak situations, suitable analysis and forecasting techniques can be used to gain insights into an ongoing outbreak.
Appendix
Available only for authorised users
Literature
3.
go back to reference Griffith DC, Kelly-Hope LA, Miller MA. Review of reported cholera outbreaks worldwide, 1995-2005. Am J Trop Med Hyg. 2006;75:973–7.CrossRef Griffith DC, Kelly-Hope LA, Miller MA. Review of reported cholera outbreaks worldwide, 1995-2005. Am J Trop Med Hyg. 2006;75:973–7.CrossRef
4.
go back to reference Centers for Disease Control and Prevention (CDC). Investigation of hepatitis E outbreak among refugees - Upper Nile, South Sudan, 2012-2013. MMWR Morb Mortal Wkly Rep. 2013;62:581–586. Centers for Disease Control and Prevention (CDC). Investigation of hepatitis E outbreak among refugees - Upper Nile, South Sudan, 2012-2013. MMWR Morb Mortal Wkly Rep. 2013;62:581–586.
5.
go back to reference Connolly MA, Gayer M, Ryan MJ, Salama P, Spiegel P, Heymann DL. Communicable diseases in complex emergencies: impact and challenges. Lancet. 2004;364:1974–83.CrossRef Connolly MA, Gayer M, Ryan MJ, Salama P, Spiegel P, Heymann DL. Communicable diseases in complex emergencies: impact and challenges. Lancet. 2004;364:1974–83.CrossRef
6.
go back to reference World Health Organization. Diphtheria vaccine: WHO position paper – August 2017. Weekly Epidemiological Records. 2017;92:417–35. World Health Organization. Diphtheria vaccine: WHO position paper – August 2017. Weekly Epidemiological Records. 2017;92:417–35.
7.
go back to reference Anderson RM, May RM. Infectious diseases of humans: dynamics and control. Oxford: Oxford University Press; 1992. ISBN: 9780198540403. Anderson RM, May RM. Infectious diseases of humans: dynamics and control. Oxford: Oxford University Press; 1992. ISBN: 9780198540403.
9.
go back to reference Blumberg LH, Prieto MA, Diaz JV, Blanco MJ, Valle B, Pla C, et al. The preventable tragedy of diphtheria in the 21st century. Int J Infect Dis. 2018;71:122–3.CrossRef Blumberg LH, Prieto MA, Diaz JV, Blanco MJ, Valle B, Pla C, et al. The preventable tragedy of diphtheria in the 21st century. Int J Infect Dis. 2018;71:122–3.CrossRef
10.
go back to reference Graham M, Suk JE, Takahashi S, Metcalf CJ, Jimenez AP, Prikazsky V, et al. Challenges and opportunities in disease forecasting in outbreak settings: a case study of measles in Lola Prefecture, Guinea. 2018;:tpmd170218. Graham M, Suk JE, Takahashi S, Metcalf CJ, Jimenez AP, Prikazsky V, et al. Challenges and opportunities in disease forecasting in outbreak settings: a case study of measles in Lola Prefecture, Guinea. 2018;:tpmd170218.
11.
go back to reference Viboud C, Sun K, Gaffey R, Ajelli M, Fumanelli L, Merler S, et al. The RAPIDD ebola forecasting challenge: synthesis and lessons learnt. Epidemics. 2018;22:13–21.CrossRef Viboud C, Sun K, Gaffey R, Ajelli M, Fumanelli L, Merler S, et al. The RAPIDD ebola forecasting challenge: synthesis and lessons learnt. Epidemics. 2018;22:13–21.CrossRef
12.
go back to reference Baguelin M, Newton JR, Demiris N, Daly J, Mumford JA, Wood JLN. Control of equine influenza: scenario testing using a realistic metapopulation model of spread. J R Soc Interface. 2010;7:67–79.CrossRef Baguelin M, Newton JR, Demiris N, Daly J, Mumford JA, Wood JLN. Control of equine influenza: scenario testing using a realistic metapopulation model of spread. J R Soc Interface. 2010;7:67–79.CrossRef
19.
go back to reference Bretó C, He D, Ionides EL, King AA. Time series analysis via mechanistic models. Ann Appl Stat. 2009;3:319–48.CrossRef Bretó C, He D, Ionides EL, King AA. Time series analysis via mechanistic models. Ann Appl Stat. 2009;3:319–48.CrossRef
23.
go back to reference Chowell G. Fitting dynamic models to epidemic outbreaks with quantified uncertainty: a primer for parameter uncertainty, identifiability, and forecasts. Infect Dis Model. 2017;2:379–98.PubMedPubMedCentral Chowell G. Fitting dynamic models to epidemic outbreaks with quantified uncertainty: a primer for parameter uncertainty, identifiability, and forecasts. Infect Dis Model. 2017;2:379–98.PubMedPubMedCentral
24.
25.
go back to reference Cazelles B, Champagne C, Dureau J. Accounting for non-stationarity in epidemiology by embedding time-varying parameters in stochastic models. PLoS Comput Biol. 2018;14:e1006211.CrossRef Cazelles B, Champagne C, Dureau J. Accounting for non-stationarity in epidemiology by embedding time-varying parameters in stochastic models. PLoS Comput Biol. 2018;14:e1006211.CrossRef
27.
go back to reference Poletti P, Parlamento S, Fayyisaa T, Feyyiss R, Lusiani M, Tsegaye A, et al. The hidden burden of measles in Ethiopia: how distance to hospital shapes the disease mortality rate. BMC Med. 2018;16:177.CrossRef Poletti P, Parlamento S, Fayyisaa T, Feyyiss R, Lusiani M, Tsegaye A, et al. The hidden burden of measles in Ethiopia: how distance to hospital shapes the disease mortality rate. BMC Med. 2018;16:177.CrossRef
28.
go back to reference Anderson RM, May RM. Directly transmitted infections diseases: control by vaccination. Science. 1982;215:1053–60.CrossRef Anderson RM, May RM. Directly transmitted infections diseases: control by vaccination. Science. 1982;215:1053–60.CrossRef
29.
go back to reference Matsuyama R, Akhmetzhanov AR, Endo A, Lee H, Yamaguchi T, Tsuzuki S, et al. Uncertainty and sensitivity analysis of the basic reproduction number of diphtheria: a case study of a Rohingya refugee camp in Bangladesh, November–December 2017. PeerJ. 2018;6:e4583.CrossRef Matsuyama R, Akhmetzhanov AR, Endo A, Lee H, Yamaguchi T, Tsuzuki S, et al. Uncertainty and sensitivity analysis of the basic reproduction number of diphtheria: a case study of a Rohingya refugee camp in Bangladesh, November–December 2017. PeerJ. 2018;6:e4583.CrossRef
30.
go back to reference Goldstein E, Pitzer VE, O’Hagan JJ, Lipsitch M. Temporally varying relative risks for infectious diseases: implications for infectious disease control. Epidemiology. 2017;28:136–44.CrossRef Goldstein E, Pitzer VE, O’Hagan JJ, Lipsitch M. Temporally varying relative risks for infectious diseases: implications for infectious disease control. Epidemiology. 2017;28:136–44.CrossRef
31.
go back to reference Bausch DG, Edmunds J. Real-time modeling should be routinely integrated into outbreak response. 2018;:tpmd180150. Bausch DG, Edmunds J. Real-time modeling should be routinely integrated into outbreak response. 2018;:tpmd180150.
Metadata
Title
Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh
Authors
Flavio Finger
Sebastian Funk
Kate White
M. Ruby Siddiqui
W. John Edmunds
Adam J. Kucharski
Publication date
01-12-2019
Publisher
BioMed Central
Keyword
Diphtheria
Published in
BMC Medicine / Issue 1/2019
Electronic ISSN: 1741-7015
DOI
https://doi.org/10.1186/s12916-019-1288-7

Other articles of this Issue 1/2019

BMC Medicine 1/2019 Go to the issue