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Published in: BMC Medical Imaging 1/2015

Open Access 01-12-2015 | Research article

Valid and efficient manual estimates of intracranial volume from magnetic resonance images

Authors: Niklas Klasson, Erik Olsson, Mats Rudemo, Carl Eckerström, Helge Malmgren, Anders Wallin

Published in: BMC Medical Imaging | Issue 1/2015

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Abstract

Background

Manual segmentations of the whole intracranial vault in high-resolution magnetic resonance images are often regarded as very time-consuming. Therefore it is common to only segment a few linearly spaced intracranial areas to estimate the whole volume. The purpose of the present study was to evaluate how the validity of intracranial volume estimates is affected by the chosen interpolation method, orientation of the intracranial areas and the linear spacing between them.

Methods

Intracranial volumes were manually segmented on 62 participants from the Gothenburg MCI study using 1.5 T, T1-weighted magnetic resonance images. Estimates of the intracranial volumes were then derived using subsamples of linearly spaced coronal, sagittal or transversal intracranial areas from the same volumes. The subsamples of intracranial areas were interpolated into volume estimates by three different interpolation methods. The linear spacing between the intracranial areas ranged from 2 to 50 mm and the validity of the estimates was determined by comparison with the entire intracranial volumes.

Results

A progressive decrease in intra-class correlation and an increase in percentage error could be seen with increased linear spacing between intracranial areas. With small linear spacing (≤15 mm), orientation of the intracranial areas and interpolation method had negligible effects on the validity. With larger linear spacing, the best validity was achieved using cubic spline interpolation with either coronal or sagittal intracranial areas. Even at a linear spacing of 50 mm, cubic spline interpolation on either coronal or sagittal intracranial areas had a mean absolute agreement intra-class correlation with the entire intracranial volumes above 0.97.

Conclusion

Cubic spline interpolation in combination with linearly spaced sagittal or coronal intracranial areas overall resulted in the most valid and robust estimates of intracranial volume. Using this method, valid ICV estimates could be obtained in less than five minutes per patient.
Literature
1.
go back to reference Whitwell JL, Crum WR, Watt HC, Fox NC. Normalization of cerebral volumes by use of intracranial volume: implications for longitudinal quantitative MR imaging. AJNR Am J Neuroradiol. 2001;22:1483–9.PubMed Whitwell JL, Crum WR, Watt HC, Fox NC. Normalization of cerebral volumes by use of intracranial volume: implications for longitudinal quantitative MR imaging. AJNR Am J Neuroradiol. 2001;22:1483–9.PubMed
2.
go back to reference Eckerström C, Olsson E, Borga M, Ekholm S, Ribbelin S, Rolstad S, et al. Small baseline volume of left hippocampus is associated with subsequent conversion of MCI into dementia: the Goteborg MCI study. J Neurol Sci. 2008;272:48–59.CrossRefPubMed Eckerström C, Olsson E, Borga M, Ekholm S, Ribbelin S, Rolstad S, et al. Small baseline volume of left hippocampus is associated with subsequent conversion of MCI into dementia: the Goteborg MCI study. J Neurol Sci. 2008;272:48–59.CrossRefPubMed
3.
go back to reference Olsson E, Eckerström C, Berg G, Borga M, Ekholm S, Johannsson G, et al. Hippocampal volumes in patients exposed to low-dose radiation to the basal brain. A case–control study in long-term survivors from cancer in the head and neck region. Radiat Oncol. 2012;7:202.CrossRefPubMedPubMedCentral Olsson E, Eckerström C, Berg G, Borga M, Ekholm S, Johannsson G, et al. Hippocampal volumes in patients exposed to low-dose radiation to the basal brain. A case–control study in long-term survivors from cancer in the head and neck region. Radiat Oncol. 2012;7:202.CrossRefPubMedPubMedCentral
4.
go back to reference Eritaia J, Wood SJ, Stuart GW, Bridle N, Dudgeon P, Maruff P, et al. An optimized method for estimating intracranial volume from magnetic resonance images. Magn Reson Med. 2000;44:973–7.CrossRefPubMed Eritaia J, Wood SJ, Stuart GW, Bridle N, Dudgeon P, Maruff P, et al. An optimized method for estimating intracranial volume from magnetic resonance images. Magn Reson Med. 2000;44:973–7.CrossRefPubMed
5.
go back to reference Malykhin NV, Lebel RM, Coupland NJ, Wilman AH, Carter R. In vivo quantification of hippocampal subfields using 4.7 T fast spin echo imaging. Neuroimage. 2010;49:1224–30.CrossRefPubMed Malykhin NV, Lebel RM, Coupland NJ, Wilman AH, Carter R. In vivo quantification of hippocampal subfields using 4.7 T fast spin echo imaging. Neuroimage. 2010;49:1224–30.CrossRefPubMed
6.
go back to reference Surdhar I, Gee M, Bouchard T, Coupland N, Malykhin N, Camicioli R. Intact limbic-prefrontal connections and reduced amygdala volumes in Parkinson’s disease with mild depressive symptoms. Parkinsonism Relat Disord. 2012;18:809–13.CrossRefPubMed Surdhar I, Gee M, Bouchard T, Coupland N, Malykhin N, Camicioli R. Intact limbic-prefrontal connections and reduced amygdala volumes in Parkinson’s disease with mild depressive symptoms. Parkinsonism Relat Disord. 2012;18:809–13.CrossRefPubMed
7.
go back to reference Butler C, van Erp W, Bhaduri A, Hammers A, Heckemann R, Zeman A. Magnetic resonance volumetry reveals focal brain atrophy in transient epileptic amnesia. Epilepsy Behav. 2013;28:363–9.CrossRefPubMed Butler C, van Erp W, Bhaduri A, Hammers A, Heckemann R, Zeman A. Magnetic resonance volumetry reveals focal brain atrophy in transient epileptic amnesia. Epilepsy Behav. 2013;28:363–9.CrossRefPubMed
8.
go back to reference Reetz K, Costa AS, Mirzazade S, Lehmann A, Juzek A, Rakowicz M, et al. Genotype-specific patterns of atrophy progression are more sensitive than clinical decline in SCA1, SCA3 and SCA6. Brain. 2013;136:905–17.CrossRefPubMed Reetz K, Costa AS, Mirzazade S, Lehmann A, Juzek A, Rakowicz M, et al. Genotype-specific patterns of atrophy progression are more sensitive than clinical decline in SCA1, SCA3 and SCA6. Brain. 2013;136:905–17.CrossRefPubMed
9.
go back to reference Travis SG, Huang Y, Fujiwara E, Radomski A, Olsen F, Carter R, et al. High field structural MRI reveals specific episodic memory correlates in the subfields of the hippocampus. Neuropsychologia. 2014;53:233–45.CrossRefPubMed Travis SG, Huang Y, Fujiwara E, Radomski A, Olsen F, Carter R, et al. High field structural MRI reveals specific episodic memory correlates in the subfields of the hippocampus. Neuropsychologia. 2014;53:233–45.CrossRefPubMed
10.
go back to reference Peters F, Villeneuve S, Belleville S. Predicting progression to dementia in elderly subjects with mild cognitive impairment using both cognitive and neuroimaging predictors. J Alzheimers Dis. 2014;38:307–18.PubMed Peters F, Villeneuve S, Belleville S. Predicting progression to dementia in elderly subjects with mild cognitive impairment using both cognitive and neuroimaging predictors. J Alzheimers Dis. 2014;38:307–18.PubMed
11.
go back to reference Buckner RL, Head D, Parker J, Fotenos AF, Marcus D, Morris JC, et al. A unified approach for morphometric and functional data analysis in young, old, and demented adults using automated atlas-based head size normalization: reliability and validation against manual measurement of total intracranial volume. Neuroimage. 2004;23:724–38.CrossRefPubMed Buckner RL, Head D, Parker J, Fotenos AF, Marcus D, Morris JC, et al. A unified approach for morphometric and functional data analysis in young, old, and demented adults using automated atlas-based head size normalization: reliability and validation against manual measurement of total intracranial volume. Neuroimage. 2004;23:724–38.CrossRefPubMed
12.
go back to reference Keihaninejad S, Heckemann RA, Fagiolo G, Symms MR, Hajnal JV, Hammers A. A robust method to estimate the intracranial volume across MRI field strengths (1.5T and 3T). Neuroimage. 2010;50:1427–37.CrossRefPubMedPubMedCentral Keihaninejad S, Heckemann RA, Fagiolo G, Symms MR, Hajnal JV, Hammers A. A robust method to estimate the intracranial volume across MRI field strengths (1.5T and 3T). Neuroimage. 2010;50:1427–37.CrossRefPubMedPubMedCentral
13.
go back to reference Reisberg B, Ferris SH, de Leon MJ, Crook T. Global Deterioration Scale (GDS). Psychopharmacol Bull. 1988;24:661–3.PubMed Reisberg B, Ferris SH, de Leon MJ, Crook T. Global Deterioration Scale (GDS). Psychopharmacol Bull. 1988;24:661–3.PubMed
14.
go back to reference Wallin A, Göthlin M, Gustavsson M, Zetterberg H, Eckerström C, Blennow K, et al. Progression from mild to pronounced MCI is not associated with cerebrospinal fluid biomarker deviations. Dement Geriatr Cogn Disord. 2011;32:193–7.CrossRefPubMed Wallin A, Göthlin M, Gustavsson M, Zetterberg H, Eckerström C, Blennow K, et al. Progression from mild to pronounced MCI is not associated with cerebrospinal fluid biomarker deviations. Dement Geriatr Cogn Disord. 2011;32:193–7.CrossRefPubMed
15.
go back to reference McGraw KO, Wong SP. Forming inferences about some intraclass correlation coefficients. Psychol Methods. 1996;1:30–46.CrossRef McGraw KO, Wong SP. Forming inferences about some intraclass correlation coefficients. Psychol Methods. 1996;1:30–46.CrossRef
17.
go back to reference Sepkoski Jr JJ. Quantified coefficients of association and measurement of similarity. Math Geol. 1974;6:135–52.CrossRef Sepkoski Jr JJ. Quantified coefficients of association and measurement of similarity. Math Geol. 1974;6:135–52.CrossRef
18.
go back to reference Raz N, Ghisletta P, Rodrigue KM, Kennedy KM, Lindenberger U. Trajectories of brain aging in middle-aged and older adults: regional and individual differences. Neuroimage. 2010;51:501–11.CrossRefPubMedPubMedCentral Raz N, Ghisletta P, Rodrigue KM, Kennedy KM, Lindenberger U. Trajectories of brain aging in middle-aged and older adults: regional and individual differences. Neuroimage. 2010;51:501–11.CrossRefPubMedPubMedCentral
19.
go back to reference Nordenskjöld R, Malmberg F, Larsson EM, Simmons A, Brooks SJ, Lind L, et al. Intracranial volume estimated with commonly used methods could introduce bias in studies including brain volume measurements. Neuroimage. 2013;83:355–60.CrossRefPubMed Nordenskjöld R, Malmberg F, Larsson EM, Simmons A, Brooks SJ, Lind L, et al. Intracranial volume estimated with commonly used methods could introduce bias in studies including brain volume measurements. Neuroimage. 2013;83:355–60.CrossRefPubMed
22.
go back to reference Malone IB, Leung KK, Clegg S, Barnes J, Whitwell JL, Ashburner J, et al. Accurate automatic estimation of total intracranial volume: a nuisance variable with less nuisance. Neuroimage. 2015;104:366–72.CrossRefPubMedPubMedCentral Malone IB, Leung KK, Clegg S, Barnes J, Whitwell JL, Ashburner J, et al. Accurate automatic estimation of total intracranial volume: a nuisance variable with less nuisance. Neuroimage. 2015;104:366–72.CrossRefPubMedPubMedCentral
23.
go back to reference Pengas G, Pereira JM, Williams GB, Nestor PJ. Comparative reliability of total intracranial volume estimation methods and the influence of atrophy in a longitudinal semantic dementia cohort. J Neuroimaging. 2009;19:37–46.CrossRefPubMed Pengas G, Pereira JM, Williams GB, Nestor PJ. Comparative reliability of total intracranial volume estimation methods and the influence of atrophy in a longitudinal semantic dementia cohort. J Neuroimaging. 2009;19:37–46.CrossRefPubMed
24.
go back to reference Lehmann TM, Gönner C, Spitzer K. Survey: interpolation methods in medical image processing. IEEE Trans Med Imaging. 1999;18:1049–75.CrossRefPubMed Lehmann TM, Gönner C, Spitzer K. Survey: interpolation methods in medical image processing. IEEE Trans Med Imaging. 1999;18:1049–75.CrossRefPubMed
Metadata
Title
Valid and efficient manual estimates of intracranial volume from magnetic resonance images
Authors
Niklas Klasson
Erik Olsson
Mats Rudemo
Carl Eckerström
Helge Malmgren
Anders Wallin
Publication date
01-12-2015
Publisher
BioMed Central
Published in
BMC Medical Imaging / Issue 1/2015
Electronic ISSN: 1471-2342
DOI
https://doi.org/10.1186/s12880-015-0045-4

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