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Published in: BMC Infectious Diseases 1/2016

Open Access 01-12-2016 | Research article

Does typing of Chlamydia trachomatis using housekeeping multilocus sequence typing reveal different sexual networks among heterosexuals and men who have sex with men?

Authors: Bart Versteeg, Sylvia M. Bruisten, Arie van der Ende, Yvonne Pannekoek

Published in: BMC Infectious Diseases | Issue 1/2016

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Abstract

Background

Chlamydia trachomatis infections remain the most common bacterial sexually transmitted infection worldwide. To gain more insight into the epidemiology and transmission of C. trachomatis, several schemes of multilocus sequence typing (MLST) have been developed. We investigated the clustering of C. trachomatis strains derived from men who have sex with men (MSM) and heterosexuals using the MLST scheme based on 7 housekeeping genes (MLST-7) adapted for clinical specimens and a high-resolution MLST scheme based on 6 polymorphic genes, including ompA (hr-MLST-6).

Methods

Specimens from 100 C. trachomatis infected men who have sex with men (MSM) and 100 heterosexual women were randomly selected from previous studies and sequenced. We adapted the MLST-7 scheme to a nested assay to be suitable for direct typing of clinical specimens. All selected specimens were typed using both the adapted MLST-7 scheme and the hr-MLST-6 scheme. Clustering of C. trachomatis strains derived from MSM and heterosexuals was assessed using minimum spanning tree analysis.

Results

Sufficient chlamydial DNA was present in 188 of the 200 (94 %) selected samples. Using the adapted MLST-7 scheme, full MLST profiles were obtained for 187 of 188 tested specimens resulting in a high success rate of 99.5 %. Of these 187 specimens, 91 (48.7 %) were from MSM and 96 (51.3 %) from heterosexuals. We detected 21 sequence types (STs) using the adapted MLST-7 and 79 STs using the hr-MLST-6 scheme. Minimum spanning tree analyses was used to examine the clustering of MLST-7 data, which showed no reflection of separate transmission in MSM and heterosexual hosts. Moreover, typing using the hr-MLST-6 scheme identified genetically related clusters within each of clusters that were identified by using the MLST-7 scheme.

Conclusion

No distinct transmission of C. trachomatis could be observed in MSM and heterosexuals using the adapted MLST-7 scheme in contrast to using the hr-MLST-6. In addition, we compared clustering of both MLST schemes and demonstrated that typing using the hr-MLST-6 scheme is able to identify genetically related clusters of C. trachomatis strains within each of the clusters that were identified by using the MLST-7 scheme.
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Literature
1.
go back to reference WHO. Global incidence and prevalence of selected curable sexually transmitted infections: 2008. Reprod Health Matters. 2012;20:207–9.CrossRef WHO. Global incidence and prevalence of selected curable sexually transmitted infections: 2008. Reprod Health Matters. 2012;20:207–9.CrossRef
2.
go back to reference Haggerty CL, Gottlieb SL, Taylor BD, Low N, Xu F, Ness RB. Risk of sequelae after Chlamydia trachomatis genital infection in women. J Infect Dis. 2010;201 Suppl 2:S134–55.CrossRefPubMed Haggerty CL, Gottlieb SL, Taylor BD, Low N, Xu F, Ness RB. Risk of sequelae after Chlamydia trachomatis genital infection in women. J Infect Dis. 2010;201 Suppl 2:S134–55.CrossRefPubMed
3.
go back to reference Land JA, Van Bergen JE, Morre SA, Postma MJ. Epidemiology of Chlamydia trachomatis infection in women and the cost-effectiveness of screening. Hum Reprod Update. 2010;16:189–204.CrossRefPubMed Land JA, Van Bergen JE, Morre SA, Postma MJ. Epidemiology of Chlamydia trachomatis infection in women and the cost-effectiveness of screening. Hum Reprod Update. 2010;16:189–204.CrossRefPubMed
4.
go back to reference Rekart ML, Gilbert M, Meza R, Kim PH, Chang M, Money DM, et al. Chlamydia public health programs and the epidemiology of pelvic inflammatory disease and ectopic pregnancy. J Infect Dis. 2013;207:30–8.CrossRefPubMed Rekart ML, Gilbert M, Meza R, Kim PH, Chang M, Money DM, et al. Chlamydia public health programs and the epidemiology of pelvic inflammatory disease and ectopic pregnancy. J Infect Dis. 2013;207:30–8.CrossRefPubMed
5.
go back to reference Herrmann B, Torner A, Low N, Klint M, Nilsson A, Velicko I, et al. Emergence and spread of Chlamydia trachomatis variant, Sweden. Emerg Infect Dis. 2008;14:1462–5.CrossRefPubMedPubMedCentral Herrmann B, Torner A, Low N, Klint M, Nilsson A, Velicko I, et al. Emergence and spread of Chlamydia trachomatis variant, Sweden. Emerg Infect Dis. 2008;14:1462–5.CrossRefPubMedPubMedCentral
6.
go back to reference Jurstrand M, Christerson L, Klint M, Fredlund H, Unemo M, Herrmann B. Characterisation of Chlamydia trachomatis by ompA sequencing and multilocus sequence typing in a Swedish county before and after identification of the new variant. Sex Transm Infect. 2010;86:56–60.CrossRefPubMed Jurstrand M, Christerson L, Klint M, Fredlund H, Unemo M, Herrmann B. Characterisation of Chlamydia trachomatis by ompA sequencing and multilocus sequence typing in a Swedish county before and after identification of the new variant. Sex Transm Infect. 2010;86:56–60.CrossRefPubMed
7.
go back to reference Harris SR, Clarke IN, Seth-Smith HM, Solomon AW, Cutcliffe LT, Marsh P, et al. Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing. Nat Genet. 2012;44:413–9. S1.CrossRefPubMedPubMedCentral Harris SR, Clarke IN, Seth-Smith HM, Solomon AW, Cutcliffe LT, Marsh P, et al. Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing. Nat Genet. 2012;44:413–9. S1.CrossRefPubMedPubMedCentral
8.
go back to reference Klint M, Fuxelius HH, Goldkuhl RR, Skarin H, Rutemark C, Andersson SG, et al. High-resolution genotyping of Chlamydia trachomatis strains by multilocus sequence analysis. J Clin Microbiol. 2007;45:1410–4.CrossRefPubMedPubMedCentral Klint M, Fuxelius HH, Goldkuhl RR, Skarin H, Rutemark C, Andersson SG, et al. High-resolution genotyping of Chlamydia trachomatis strains by multilocus sequence analysis. J Clin Microbiol. 2007;45:1410–4.CrossRefPubMedPubMedCentral
9.
go back to reference Pannekoek Y, Morelli G, Kusecek B, Morre SA, Ossewaarde JM, Langerak AA, et al. Multi locus sequence typing of Chlamydiales: clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis. BMC Microbiol. 2008;8:42.CrossRefPubMedPubMedCentral Pannekoek Y, Morelli G, Kusecek B, Morre SA, Ossewaarde JM, Langerak AA, et al. Multi locus sequence typing of Chlamydiales: clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis. BMC Microbiol. 2008;8:42.CrossRefPubMedPubMedCentral
10.
go back to reference Dean D, Bruno WJ, Wan R, Gomes JP, Devignot S, Mehari T, et al. Predicting phenotype and emerging strains among Chlamydia trachomatis infections. Emerg Infect Dis. 2009;15:1385–94.CrossRefPubMedPubMedCentral Dean D, Bruno WJ, Wan R, Gomes JP, Devignot S, Mehari T, et al. Predicting phenotype and emerging strains among Chlamydia trachomatis infections. Emerg Infect Dis. 2009;15:1385–94.CrossRefPubMedPubMedCentral
11.
go back to reference Bom RJ, Christerson L, van der Loeff Schim MF, Coutinho RA, Herrmann B, Bruisten SM. Evaluation of high-resolution typing methods for Chlamydia trachomatis in samples from heterosexual couples. J Clin Microbiol. 2011;49:2844–53.CrossRefPubMedPubMedCentral Bom RJ, Christerson L, van der Loeff Schim MF, Coutinho RA, Herrmann B, Bruisten SM. Evaluation of high-resolution typing methods for Chlamydia trachomatis in samples from heterosexual couples. J Clin Microbiol. 2011;49:2844–53.CrossRefPubMedPubMedCentral
12.
go back to reference Herrmann B, Isaksson J, Ryberg M, Tangrot J, Saleh I, Versteeg B, et al. Global Multilocus sequence type analysis of Chlamydia trachomatis strains from 16 Countries. J Clin Microbiol. 2015;53:2172–9.CrossRefPubMedPubMedCentral Herrmann B, Isaksson J, Ryberg M, Tangrot J, Saleh I, Versteeg B, et al. Global Multilocus sequence type analysis of Chlamydia trachomatis strains from 16 Countries. J Clin Microbiol. 2015;53:2172–9.CrossRefPubMedPubMedCentral
13.
go back to reference Maiden MC, Bygraves JA, Feil E, Morelli G, Russell JE, Urwin R, et al. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc Natl Acad Sci U S A. 1998;95:3140–5.CrossRefPubMedPubMedCentral Maiden MC, Bygraves JA, Feil E, Morelli G, Russell JE, Urwin R, et al. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc Natl Acad Sci U S A. 1998;95:3140–5.CrossRefPubMedPubMedCentral
14.
go back to reference de Vries HJ, van der Loeff Schim MF, Bruisten SM. High-resolution typing of Chlamydia trachomatis: epidemiological and clinical uses. Curr Opin Infect Dis. 2015;28:61–71.CrossRefPubMed de Vries HJ, van der Loeff Schim MF, Bruisten SM. High-resolution typing of Chlamydia trachomatis: epidemiological and clinical uses. Curr Opin Infect Dis. 2015;28:61–71.CrossRefPubMed
15.
go back to reference Christerson L, Bom RJ, Bruisten SM, Yass R, Hardick J, Bratt G, et al. Chlamydia trachomatis strains show specific clustering for men who have sex with men compared to heterosexual populations in Sweden, the Netherlands, and the United States. J Clin Microbiol. 2012;50:3548–55.CrossRefPubMedPubMedCentral Christerson L, Bom RJ, Bruisten SM, Yass R, Hardick J, Bratt G, et al. Chlamydia trachomatis strains show specific clustering for men who have sex with men compared to heterosexual populations in Sweden, the Netherlands, and the United States. J Clin Microbiol. 2012;50:3548–55.CrossRefPubMedPubMedCentral
16.
go back to reference Bom RJ, van der Helm JJ, van der Loeff Schim MF, van Rooijen MS, Heijman T, Matser A, et al. Distinct transmission networks of Chlamydia trachomatis in men who have sex with men and heterosexual adults in Amsterdam, The Netherlands. PLoS One. 2013;8:e53869.CrossRefPubMedPubMedCentral Bom RJ, van der Helm JJ, van der Loeff Schim MF, van Rooijen MS, Heijman T, Matser A, et al. Distinct transmission networks of Chlamydia trachomatis in men who have sex with men and heterosexual adults in Amsterdam, The Netherlands. PLoS One. 2013;8:e53869.CrossRefPubMedPubMedCentral
17.
go back to reference Versteeg B, van Rooijen MS, van der Loeff Schim MF, de Vries HJ, Bruisten SM. No indication for tissue tropism in urogenital and anorectal Chlamydia trachomatis infections using high-resolution multilocus sequence typing. BMC Infect Dis. 2014;14:464.CrossRefPubMedPubMedCentral Versteeg B, van Rooijen MS, van der Loeff Schim MF, de Vries HJ, Bruisten SM. No indication for tissue tropism in urogenital and anorectal Chlamydia trachomatis infections using high-resolution multilocus sequence typing. BMC Infect Dis. 2014;14:464.CrossRefPubMedPubMedCentral
18.
go back to reference Jolley KA, Maiden MC. Using multilocus sequence typing to study bacterial variation: prospects in the genomic era. Future Microbiol. 2014;9:623–30.CrossRefPubMed Jolley KA, Maiden MC. Using multilocus sequence typing to study bacterial variation: prospects in the genomic era. Future Microbiol. 2014;9:623–30.CrossRefPubMed
19.
go back to reference Maiden MC, van Rensburg Jansen MJ, Bray JE, Earle SG, Ford SA, Jolley KA, et al. MLST revisited: the gene-by-gene approach to bacterial genomics. Nat Rev Microbiol. 2013;11:728–36. Maiden MC, van Rensburg Jansen MJ, Bray JE, Earle SG, Ford SA, Jolley KA, et al. MLST revisited: the gene-by-gene approach to bacterial genomics. Nat Rev Microbiol. 2013;11:728–36.
20.
go back to reference Almeida F, Borges V, Ferreira R, Borrego MJ, Gomes JP, Mota LJ. Polymorphisms in inc proteins and differential expression of inc genes among Chlamydia trachomatis strains correlate with invasiveness and tropism of lymphogranuloma venereum isolates. J Bacteriol. 2012;194:6574–85.CrossRefPubMedPubMedCentral Almeida F, Borges V, Ferreira R, Borrego MJ, Gomes JP, Mota LJ. Polymorphisms in inc proteins and differential expression of inc genes among Chlamydia trachomatis strains correlate with invasiveness and tropism of lymphogranuloma venereum isolates. J Bacteriol. 2012;194:6574–85.CrossRefPubMedPubMedCentral
21.
go back to reference Borges V, Nunes A, Ferreira R, Borrego MJ, Gomes JP. Directional evolution of Chlamydia trachomatis towards niche-specific adaptation. J Bacteriol. 2012;194:6143–53.CrossRefPubMedPubMedCentral Borges V, Nunes A, Ferreira R, Borrego MJ, Gomes JP. Directional evolution of Chlamydia trachomatis towards niche-specific adaptation. J Bacteriol. 2012;194:6143–53.CrossRefPubMedPubMedCentral
22.
go back to reference Nunes A, Borrego MJ, Gomes JP. Genomic features beyond Chlamydia trachomatis phenotypes: what do we think we know? Infect Genet Evol. 2013;16:392–400.CrossRefPubMed Nunes A, Borrego MJ, Gomes JP. Genomic features beyond Chlamydia trachomatis phenotypes: what do we think we know? Infect Genet Evol. 2013;16:392–400.CrossRefPubMed
23.
go back to reference Abdelsamed H, Peters J, Byrne GI. Genetic variation in Chlamydia trachomatis and their hosts: impact on disease severity and tissue tropism. Future Microbiol. 2013;8:1129–46.CrossRefPubMedPubMedCentral Abdelsamed H, Peters J, Byrne GI. Genetic variation in Chlamydia trachomatis and their hosts: impact on disease severity and tissue tropism. Future Microbiol. 2013;8:1129–46.CrossRefPubMedPubMedCentral
Metadata
Title
Does typing of Chlamydia trachomatis using housekeeping multilocus sequence typing reveal different sexual networks among heterosexuals and men who have sex with men?
Authors
Bart Versteeg
Sylvia M. Bruisten
Arie van der Ende
Yvonne Pannekoek
Publication date
01-12-2016
Publisher
BioMed Central
Published in
BMC Infectious Diseases / Issue 1/2016
Electronic ISSN: 1471-2334
DOI
https://doi.org/10.1186/s12879-016-1486-2

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