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Published in: Infectious Agents and Cancer 1/2010

Open Access 01-12-2010 | Research article

Epstein-Barr virus-specific methylation of human genes in gastric cancer cells

Authors: Julie L Ryan, Richard J Jones, Shannon C Kenney, Ashley G Rivenbark, Weihua Tang, Elizabeth RW Knight, William B Coleman, Margaret L Gulley

Published in: Infectious Agents and Cancer | Issue 1/2010

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Abstract

Background

Epstein-Barr Virus (EBV) is found in 10% of all gastric adenocarcinomas but its role in tumor development and maintenance remains unclear. The objective of this study was to examine EBV-mediated dysregulation of cellular factors implicated in gastric carcinogenesis.

Methods

Gene expression patterns were examined in EBV-negative and EBV-positive AGS gastric epithelial cells using a low density microarray, reverse transcription PCR, histochemical stains, and methylation-specific DNA sequencing. Expression of PTGS2 (COX2) was measured in AGS cells and in primary gastric adenocarcinoma tissues.

Results

In array studies, nearly half of the 96 human genes tested, representing 15 different cancer-related signal transduction pathways, were dysregulated after EBV infection. Reverse transcription PCR confirmed significant impact on factors having diverse functions such as cell cycle regulation (IGFBP3, CDKN2A, CCND1, HSP70, ID2, ID4), DNA repair (BRCA1, TFF1), cell adhesion (ICAM1), inflammation (COX2), and angiogenesis (HIF1A). Demethylation using 5-aza-2'-deoxycytidine reversed the EBV-mediated dysregulation for all 11 genes listed here. For some promoter sequences, CpG island methylation and demethylation occurred in an EBV-specific pattern as shown by bisulfite DNA sequencing. Immunohistochemistry was less sensitive than was western blot for detecting downregulation of COX2 upon EBV infection. Virus-related dysregulation of COX2 levels in vitro was not recapitulated in vivo among naturally infected gastric cancer tissues.

Conclusions

EBV alters human gene expression in ways that could contribute to the unique pathobiology of virus-associated cancer. Furthermore, the frequency and reversability of methylation-related transcriptional alterations suggest that demethylating agents have therapeutic potential for managing EBV-related carcinoma.
Appendix
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Metadata
Title
Epstein-Barr virus-specific methylation of human genes in gastric cancer cells
Authors
Julie L Ryan
Richard J Jones
Shannon C Kenney
Ashley G Rivenbark
Weihua Tang
Elizabeth RW Knight
William B Coleman
Margaret L Gulley
Publication date
01-12-2010
Publisher
BioMed Central
Published in
Infectious Agents and Cancer / Issue 1/2010
Electronic ISSN: 1750-9378
DOI
https://doi.org/10.1186/1750-9378-5-27

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