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Published in: Virology Journal 1/2011

Open Access 01-12-2011 | Short report

Molecular characterization and phylogenetic analysis of small ruminant lentiviruses isolated from Canadian sheep and goats

Authors: Yvan L'Homme, Mourad Ouardani, Valérie Lévesque, Giuseppe Bertoni, Carole Simard, Giuliano Pisoni

Published in: Virology Journal | Issue 1/2011

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Abstract

Background

Small Ruminant Lentiviruses (SRLV) are widespread in Canadian sheep and goats and represent an important health issue in these animals. There is however no data about the genetic diversity of Caprine Arthritis Encephalitis Virus (CAEV) or Maedi Visna Virus (MVV) in this country.

Findings

We performed a molecular and phylogenetic analysis of sheep and goat lentiviruses from a small geographic area in Canada using long sequences from the gag region of 30 infected sheep and 36 infected goats originating from 14 different flocks. Pairwise DNA distance and phylogenetic analyses revealed that all SRLV sequences obtained from sheep clustered tightly with prototypical Maedi visna sequences from America. Similarly, all SRLV strains obtained from goats clustered tightly with prototypical US CAEV-Cork strain.

Conclusions

The data reported in this study suggests that Canadian and US SRLV strains share common origins. In addition, the molecular data failed to bring to light any evidence of past cross species transmission between sheep and goats, which is consistent with the type of farming practiced in this part of the country where single species flocks predominate and where opportunities of cross species transmissions are proportionately low.
Appendix
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Literature
1.
go back to reference Pasick J: Maedi-visna virus and caprine arthritis-encephalitis virus: distinct species or quasispecies and its implications for laboratory diagnosis. Can J Vet Res 1998,62(4):241-4.PubMedCentralPubMed Pasick J: Maedi-visna virus and caprine arthritis-encephalitis virus: distinct species or quasispecies and its implications for laboratory diagnosis. Can J Vet Res 1998,62(4):241-4.PubMedCentralPubMed
2.
go back to reference Pepin M, Vitu C, Russo P, Mornex JF, Peterhans E: Maedi-visna virus infection in sheep: a review. Vet Res 1998,29(3-4):341-67.PubMed Pepin M, Vitu C, Russo P, Mornex JF, Peterhans E: Maedi-visna virus infection in sheep: a review. Vet Res 1998,29(3-4):341-67.PubMed
3.
go back to reference Rowe JD, East NE: Risk factors for transmission and methods for control of caprine arthritis-encephalitis virus infection. Vet Clin North Am Food Anim Pract 1997,13(1):35-53.CrossRefPubMed Rowe JD, East NE: Risk factors for transmission and methods for control of caprine arthritis-encephalitis virus infection. Vet Clin North Am Food Anim Pract 1997,13(1):35-53.CrossRefPubMed
4.
go back to reference Narayan O, Cork LC: Lentiviral diseases of sheep and goats: chronic pneumonia leukoencephalomyelitis and arthritis. Rev Infect Dis 1985,7(1):89-98. 10.1093/clinids/7.1.89CrossRefPubMed Narayan O, Cork LC: Lentiviral diseases of sheep and goats: chronic pneumonia leukoencephalomyelitis and arthritis. Rev Infect Dis 1985,7(1):89-98. 10.1093/clinids/7.1.89CrossRefPubMed
5.
go back to reference Narayan O, Clements JE: Biology and pathogenesis of lentiviruses. J Gen Virol 1989,70(Pt 7):1617-39.CrossRefPubMed Narayan O, Clements JE: Biology and pathogenesis of lentiviruses. J Gen Virol 1989,70(Pt 7):1617-39.CrossRefPubMed
6.
go back to reference Alvarez V, tabuit-Test M, Arranz J, Leginagoikoa I, Juste RA, Amorena B, de Andres D, Lujan L, Badiola JJ, Berriatua E: PCR detection of colostrum-associated Maedi-Visna virus (MVV) infection and relationship with ELISA-antibody status in lambs. Res Vet Sci 2006,80(2):226-34. 10.1016/j.rvsc.2005.05.008CrossRefPubMed Alvarez V, tabuit-Test M, Arranz J, Leginagoikoa I, Juste RA, Amorena B, de Andres D, Lujan L, Badiola JJ, Berriatua E: PCR detection of colostrum-associated Maedi-Visna virus (MVV) infection and relationship with ELISA-antibody status in lambs. Res Vet Sci 2006,80(2):226-34. 10.1016/j.rvsc.2005.05.008CrossRefPubMed
7.
go back to reference Sonigo P, Alizon M, Staskus K, Klatzmann D, Cole S, Danos O, Retzel E, Tiollais P, Haase A, Wain-Hobson S: Nucleotide sequence of the visna lentivirus: relationship to the AIDS virus. Cell 1985,42(1):369-82. 10.1016/S0092-8674(85)80132-XCrossRefPubMed Sonigo P, Alizon M, Staskus K, Klatzmann D, Cole S, Danos O, Retzel E, Tiollais P, Haase A, Wain-Hobson S: Nucleotide sequence of the visna lentivirus: relationship to the AIDS virus. Cell 1985,42(1):369-82. 10.1016/S0092-8674(85)80132-XCrossRefPubMed
8.
go back to reference Sargan DR, Bennet ID, Cousens C, Roy DJ, Blacklaws BA, Dalziel RG, Watt NJ, McConnell I: Nucleotide sequence of EV1, a British isolate of maedi-visna virus. J Gen Virol 1991,72(Pt 8):1893-903.CrossRefPubMed Sargan DR, Bennet ID, Cousens C, Roy DJ, Blacklaws BA, Dalziel RG, Watt NJ, McConnell I: Nucleotide sequence of EV1, a British isolate of maedi-visna virus. J Gen Virol 1991,72(Pt 8):1893-903.CrossRefPubMed
9.
go back to reference Querat G, Audoly G, Sonigo P, Vigne R: Nucleotide sequence analysis of SA-OMVV, a visna-related ovine lentivirus: phylogenetic history of lentiviruses. Virology 1990,175(2):434-47. 10.1016/0042-6822(90)90428-TCrossRefPubMed Querat G, Audoly G, Sonigo P, Vigne R: Nucleotide sequence analysis of SA-OMVV, a visna-related ovine lentivirus: phylogenetic history of lentiviruses. Virology 1990,175(2):434-47. 10.1016/0042-6822(90)90428-TCrossRefPubMed
10.
go back to reference Saltarelli M, Querat G, Konings DA, Vigne R, Clements JE: Nucleotide sequence and transcriptional analysis of molecular clones of CAEV which generate infectious virus. Virology 1990,179(1):347-64. 10.1016/0042-6822(90)90303-9CrossRefPubMed Saltarelli M, Querat G, Konings DA, Vigne R, Clements JE: Nucleotide sequence and transcriptional analysis of molecular clones of CAEV which generate infectious virus. Virology 1990,179(1):347-64. 10.1016/0042-6822(90)90303-9CrossRefPubMed
11.
go back to reference Leroux C, Chastang J, Greenland T, Mornex JF: Genomic heterogeneity of small ruminant lentiviruses: existence of heterogeneous populations in sheep and of the same lentiviral genotypes in sheep and goats. Arch Virol 1997,142(6):1125-37. 10.1007/s007050050147CrossRefPubMed Leroux C, Chastang J, Greenland T, Mornex JF: Genomic heterogeneity of small ruminant lentiviruses: existence of heterogeneous populations in sheep and of the same lentiviral genotypes in sheep and goats. Arch Virol 1997,142(6):1125-37. 10.1007/s007050050147CrossRefPubMed
12.
go back to reference Zanoni RG, Nauta IM, Kuhnert P, Pauli U, Pohl B, Peterhans E: Genomic heterogeneity of small ruminant lentiviruses detected by PCR. Vet Microbiol 1992,33(1-4):341-51. 10.1016/0378-1135(92)90061-WCrossRefPubMed Zanoni RG, Nauta IM, Kuhnert P, Pauli U, Pohl B, Peterhans E: Genomic heterogeneity of small ruminant lentiviruses detected by PCR. Vet Microbiol 1992,33(1-4):341-51. 10.1016/0378-1135(92)90061-WCrossRefPubMed
13.
go back to reference Shah C, Boni J, Huder JB, et al.: Phylogenetic analysis and reclassification of caprine and ovine lentiviruses based on 104 new isolates: evidence for regular sheep-to-goat transmission and worldwide propagation through livestock trade. Virology 2004,319(1):12-26. 10.1016/j.virol.2003.09.047CrossRefPubMed Shah C, Boni J, Huder JB, et al.: Phylogenetic analysis and reclassification of caprine and ovine lentiviruses based on 104 new isolates: evidence for regular sheep-to-goat transmission and worldwide propagation through livestock trade. Virology 2004,319(1):12-26. 10.1016/j.virol.2003.09.047CrossRefPubMed
14.
go back to reference Arsenault J, Dubreuil P, Girard C, Simard C, Belanger D: Maedi-visna impact on productivity in Quebec sheep flocks (Canada). Prev Vet Med 2003,59(3):125-37. 10.1016/S0167-5877(03)00086-2CrossRefPubMed Arsenault J, Dubreuil P, Girard C, Simard C, Belanger D: Maedi-visna impact on productivity in Quebec sheep flocks (Canada). Prev Vet Med 2003,59(3):125-37. 10.1016/S0167-5877(03)00086-2CrossRefPubMed
16.
go back to reference Arsenault J, Girard C, Dubreuil P, Daignault D, Galarneau JR, Boisclair J, Simard C, Belanger D: Prevalence of and carcass condemnation from maedi-visna, paratuberculosis and caseous lymphadenitis in culled sheep from Quebec, Canada. Prev Vet Med 2003,59(1-2):67-81. 10.1016/S0167-5877(03)00060-6CrossRefPubMed Arsenault J, Girard C, Dubreuil P, Daignault D, Galarneau JR, Boisclair J, Simard C, Belanger D: Prevalence of and carcass condemnation from maedi-visna, paratuberculosis and caseous lymphadenitis in culled sheep from Quebec, Canada. Prev Vet Med 2003,59(1-2):67-81. 10.1016/S0167-5877(03)00060-6CrossRefPubMed
18.
go back to reference Simard CL, Briscoe MR: An enzyme-linked immunosorbent assay for detection of antibodies to maedi-visna virus in sheep. II. Comparison to conventional agar gel immunodiffusion test. Can J Vet Res 1990,54(4):451-6.PubMedCentralPubMed Simard CL, Briscoe MR: An enzyme-linked immunosorbent assay for detection of antibodies to maedi-visna virus in sheep. II. Comparison to conventional agar gel immunodiffusion test. Can J Vet Res 1990,54(4):451-6.PubMedCentralPubMed
19.
go back to reference Tamura K, Dudley J, Nei M, Kumar S: MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 2007,24(8):1596-9. 10.1093/molbev/msm092CrossRefPubMed Tamura K, Dudley J, Nei M, Kumar S: MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 2007,24(8):1596-9. 10.1093/molbev/msm092CrossRefPubMed
20.
go back to reference Saitou N, Nei M: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987,4(4):406-25.PubMed Saitou N, Nei M: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987,4(4):406-25.PubMed
21.
go back to reference Chang JT: Inconsistency of evolutionary tree topology reconstruction methods when substitution rates vary across characters. Math Biosci 1996,134(2):189-215. 10.1016/0025-5564(95)00172-7CrossRefPubMed Chang JT: Inconsistency of evolutionary tree topology reconstruction methods when substitution rates vary across characters. Math Biosci 1996,134(2):189-215. 10.1016/0025-5564(95)00172-7CrossRefPubMed
22.
go back to reference Schmidt HA, Strimmer K, Vingron M, von HA: TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 2002,18(3):502-4. 10.1093/bioinformatics/18.3.502CrossRefPubMed Schmidt HA, Strimmer K, Vingron M, von HA: TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 2002,18(3):502-4. 10.1093/bioinformatics/18.3.502CrossRefPubMed
23.
go back to reference Felsenstein J, Churchill GA: A Hidden Markov Model approach to variation among sites in rate of evolution. Mol Biol Evol 1996,13(1):93-104.CrossRefPubMed Felsenstein J, Churchill GA: A Hidden Markov Model approach to variation among sites in rate of evolution. Mol Biol Evol 1996,13(1):93-104.CrossRefPubMed
24.
go back to reference Pisoni G, Quasso A, Moroni P: Phylogenetic analysis of small-ruminant lentivirus subtype B1 in mixed flocks: evidence for natural transmission from goats to sheep. Virology 2005,339(2):147-52. 10.1016/j.virol.2005.06.013CrossRefPubMed Pisoni G, Quasso A, Moroni P: Phylogenetic analysis of small-ruminant lentivirus subtype B1 in mixed flocks: evidence for natural transmission from goats to sheep. Virology 2005,339(2):147-52. 10.1016/j.virol.2005.06.013CrossRefPubMed
25.
go back to reference Leroux C, Cruz JC, Mornex JF: SRLVs: a genetic continuum of lentiviral species in sheep and goats with cumulative evidence of cross species transmission. Curr HIV Res 2010,8(1):94-100. 10.2174/157016210790416415CrossRefPubMed Leroux C, Cruz JC, Mornex JF: SRLVs: a genetic continuum of lentiviral species in sheep and goats with cumulative evidence of cross species transmission. Curr HIV Res 2010,8(1):94-100. 10.2174/157016210790416415CrossRefPubMed
Metadata
Title
Molecular characterization and phylogenetic analysis of small ruminant lentiviruses isolated from Canadian sheep and goats
Authors
Yvan L'Homme
Mourad Ouardani
Valérie Lévesque
Giuseppe Bertoni
Carole Simard
Giuliano Pisoni
Publication date
01-12-2011
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2011
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-8-271

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