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Published in: Virology Journal 1/2014

Open Access 01-12-2014 | Research

Multiple microRNAs targeted to internal ribosome entry site against foot-and-mouth disease virus infection in vitro and in vivo

Authors: Yanyan Chang, Yongxi Dou, Huifang Bao, Xuenong Luo, Xuerong Liu, Kebin Mu, Zaixin Liu, Xiangtao Liu, Xuepeng Cai

Published in: Virology Journal | Issue 1/2014

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Abstract

Background

Foot-and-mouth disease virus (FMDV) causes a severe vesicular disease in domestic and wild cloven-hoofed animals. Because of the limited early protection induced by current vaccines, emergency antiviral strategies to control the rapid spread of FMD outbreaks are needed.
Here we constructed multiple microRNAs (miRNAs) targeting the internal ribosome entry site (IRES) element of FMDV and investigated the effect of IRES-specific miRNAs on FMDV replication in baby hamster kidney (BHK-21) cells and suckling mice.

Results

Four IRES-specific miRNAs significantly reduced enhanced green fluorescent protein (EGFP) expression from IRES-EGFP reporter plasmids, which were used with each miRNA expression plasmid in co-transfection of BHK-21 cells. Furthermore, treatment of BHK-21 cells with Bi-miRNA (a mixture of two miRNA expression plasmids) and Dual-miRNA (a co-cistronic expression plasmid containing two miRNA hairpin structures) induced more efficient and greater inhibition of EGFP expression than did plasmids carrying single miRNA sequences.
Stably transformed BHK-21 cells and goat fibroblasts with an integrating IRES-specific Dual-miRNA were generated, and real-time quantitative RT-PCR showed that the Dual-miRNA was able to effectively inhibit the replication of FMDV (except for the Mya98 strain) in the stably transformed BHK-21 cells.
The Dual-miRNA plasmid significantly delayed the deaths of suckling mice challenged with 50× and 100× the 50% lethal dose (LD50) of FMDV vaccine strains of three serotypes (O, A and Asia 1), and induced partial/complete protection against the prevalent PanAsia-1 and Mya98 strains of FMDV serotype O.

Conclusion

These data demonstrate that IRES-specific miRNAs can significantly inhibit FMDV infection in vitro and in vivo.
Appendix
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Literature
2.
go back to reference Alexandersen S, Mowat N: Foot-and-mouth disease: host range and pathogenesis. Curr Top Microbiol Immunol 2005, 288: 9-42.PubMed Alexandersen S, Mowat N: Foot-and-mouth disease: host range and pathogenesis. Curr Top Microbiol Immunol 2005, 288: 9-42.PubMed
3.
go back to reference Belsham GJ: Distinctive features of foot-and-mouth disease virus, a member of the picornavirus family: aspects of virus protein synthesis, protein processing and structure. Prog Biolphys Mol Biol 1993, 69: 241-260.CrossRef Belsham GJ: Distinctive features of foot-and-mouth disease virus, a member of the picornavirus family: aspects of virus protein synthesis, protein processing and structure. Prog Biolphys Mol Biol 1993, 69: 241-260.CrossRef
4.
go back to reference Bachrach HL: Foot-and-mouth disease. Annu Rev Microbiol 1968, 22: 201-244. 10.1146/annurev.mi.22.100168.001221PubMedCrossRef Bachrach HL: Foot-and-mouth disease. Annu Rev Microbiol 1968, 22: 201-244. 10.1146/annurev.mi.22.100168.001221PubMedCrossRef
5.
go back to reference Brown F: The history of research in foot-and-mouth disease. Virus Res 2003, 91: 3-7. 10.1016/S0168-1702(02)00268-XPubMedCrossRef Brown F: The history of research in foot-and-mouth disease. Virus Res 2003, 91: 3-7. 10.1016/S0168-1702(02)00268-XPubMedCrossRef
6.
go back to reference Kitching RP: Global epidemiology and prospects for control of foot-and-mouth disease. Curr Microbiol Immunol 2005, 288: 133-148. Kitching RP: Global epidemiology and prospects for control of foot-and-mouth disease. Curr Microbiol Immunol 2005, 288: 133-148.
7.
go back to reference Sobrino F, Saiz M, Jimenez-clavero MA, Nunez JI, Rosas MF, Baranowski E, Ley V: Foot-and-mouth disease virus: a long known virus, but a current threat. Vet Res 2001, 32: 1-30. 10.1051/vetres:2001106PubMedCrossRef Sobrino F, Saiz M, Jimenez-clavero MA, Nunez JI, Rosas MF, Baranowski E, Ley V: Foot-and-mouth disease virus: a long known virus, but a current threat. Vet Res 2001, 32: 1-30. 10.1051/vetres:2001106PubMedCrossRef
8.
go back to reference Mason PW, Grubman MJ, Baxt B: Molecular basis of pathogenesis of FMDV. Virus Res 2003, 91: 9-32. 10.1016/S0168-1702(02)00257-5PubMedCrossRef Mason PW, Grubman MJ, Baxt B: Molecular basis of pathogenesis of FMDV. Virus Res 2003, 91: 9-32. 10.1016/S0168-1702(02)00257-5PubMedCrossRef
9.
go back to reference Ryan MD, Donelly MLL, Flint M, Cowton VM, Luke G, Hughes LE, Knox C, De Felipe P: Foot-and-mouth disease virus proteinases. In Foot-and Mouth Disease Current Perspectives. Edited by: Sobrino F, Domingo E. London: Horizon Scientific Press; 2004:53-76. Ryan MD, Donelly MLL, Flint M, Cowton VM, Luke G, Hughes LE, Knox C, De Felipe P: Foot-and-mouth disease virus proteinases. In Foot-and Mouth Disease Current Perspectives. Edited by: Sobrino F, Domingo E. London: Horizon Scientific Press; 2004:53-76.
10.
go back to reference Belsham GJ, Brangwyn JK: A region of the 5′ non-coding region of foot-and-mouth disease virus RNA directs efficient internal initiation of protein synthesis within cells; interaction with the role of the L protease in translational control. J Virol 1990, 64: 5389-5395.PubMedPubMedCentral Belsham GJ, Brangwyn JK: A region of the 5′ non-coding region of foot-and-mouth disease virus RNA directs efficient internal initiation of protein synthesis within cells; interaction with the role of the L protease in translational control. J Virol 1990, 64: 5389-5395.PubMedPubMedCentral
11.
go back to reference Kuhn R, Luz N, Beck E: Functional analysis of the internal translation initiation site of foot-and-mouth disease virus. J Virol 1990, 64: 4625-4631.PubMedPubMedCentral Kuhn R, Luz N, Beck E: Functional analysis of the internal translation initiation site of foot-and-mouth disease virus. J Virol 1990, 64: 4625-4631.PubMedPubMedCentral
12.
go back to reference Pilipenko EV, Blinov VM, Chernov BK, Dmitrieva TM, Agol VI: Conservation of the secondary structure elements of the 5′-untranslated region of cardiovirus and aphthovirus RNAs. Nucl Acids Res 1989, 17: 5701-5711. 10.1093/nar/17.14.5701PubMedPubMedCentralCrossRef Pilipenko EV, Blinov VM, Chernov BK, Dmitrieva TM, Agol VI: Conservation of the secondary structure elements of the 5′-untranslated region of cardiovirus and aphthovirus RNAs. Nucl Acids Res 1989, 17: 5701-5711. 10.1093/nar/17.14.5701PubMedPubMedCentralCrossRef
13.
go back to reference Belsham GJ, Martinez-Salas E: Genome organization, translation and replication of foot-and-mouth disease virus RNA. In Foot-and-Mouth Disease Current Perspectives. Edited by: Sobrino F, Domingo E. London: Horizon Scientific Press; 2004:19-52. Belsham GJ, Martinez-Salas E: Genome organization, translation and replication of foot-and-mouth disease virus RNA. In Foot-and-Mouth Disease Current Perspectives. Edited by: Sobrino F, Domingo E. London: Horizon Scientific Press; 2004:19-52.
14.
go back to reference Belsham GJ: Translation and replication of FMDV RNA. Curr Top Microbiol Immunol 2005, 288: 43-70.PubMed Belsham GJ: Translation and replication of FMDV RNA. Curr Top Microbiol Immunol 2005, 288: 43-70.PubMed
15.
go back to reference Domingo E, Ruiz-Jarabo CM, Sierra S, Arias A, Pariente N, Baranowski E, Escarmis C: Emergence and selection of RNA virus variant: memory and extinction. Virus Res 2001, 82: 39-44. 10.1016/S0168-1702(01)00385-9CrossRef Domingo E, Ruiz-Jarabo CM, Sierra S, Arias A, Pariente N, Baranowski E, Escarmis C: Emergence and selection of RNA virus variant: memory and extinction. Virus Res 2001, 82: 39-44. 10.1016/S0168-1702(01)00385-9CrossRef
16.
go back to reference Domingo E, Baranowski E, Escarmis C, Sobrino F, Holland JJ: Error frequencies of picornavirus RNA polymerases: evolutionary implications for viral populations. In Molecular Biology of Picornaviruses. Edited by: Semler BL, Wimmer E. Washington: DC: ASM Press; 2002:285-298.CrossRef Domingo E, Baranowski E, Escarmis C, Sobrino F, Holland JJ: Error frequencies of picornavirus RNA polymerases: evolutionary implications for viral populations. In Molecular Biology of Picornaviruses. Edited by: Semler BL, Wimmer E. Washington: DC: ASM Press; 2002:285-298.CrossRef
17.
go back to reference Cottam EM, Haydon DT, Paton DJ, Gloster J, Wilesmith JW, Ferris NP, Hutchings GH, King DP: Molecular epidemiology of the foot-and-mouth disease virus outbreak in the United Kingdom in 2001. J Virol 2006, 80: 11274-11282. 10.1128/JVI.01236-06PubMedPubMedCentralCrossRef Cottam EM, Haydon DT, Paton DJ, Gloster J, Wilesmith JW, Ferris NP, Hutchings GH, King DP: Molecular epidemiology of the foot-and-mouth disease virus outbreak in the United Kingdom in 2001. J Virol 2006, 80: 11274-11282. 10.1128/JVI.01236-06PubMedPubMedCentralCrossRef
18.
go back to reference Martinez MA, Carrillo C, Gonzalez-Candelas F, Moya A, Domingo E, Sobrino F: Fitness alteration of foot-and-mouth disease virus mutants: measurement of adaptability of viral quasispecies. J Virol 1991, 65: 3954-3957.PubMedPubMedCentral Martinez MA, Carrillo C, Gonzalez-Candelas F, Moya A, Domingo E, Sobrino F: Fitness alteration of foot-and-mouth disease virus mutants: measurement of adaptability of viral quasispecies. J Virol 1991, 65: 3954-3957.PubMedPubMedCentral
19.
go back to reference Domingo E, Escarmis C, Martinez MA, Martinez-Salas E, Mateu MG: Foot-and-mouth disease virus populations are quasispecies. Curr Top Microbiol Immunol 1992, 176: 33-47.PubMed Domingo E, Escarmis C, Martinez MA, Martinez-Salas E, Mateu MG: Foot-and-mouth disease virus populations are quasispecies. Curr Top Microbiol Immunol 1992, 176: 33-47.PubMed
20.
go back to reference Ruiz-Jarabo CM, Arias M, Baranowski E, Escarmis C, Domingo E: Memory in viral quasispecies. J Virol 2000, 74: 3543-3547. 10.1128/JVI.74.8.3543-3547.2000PubMedPubMedCentralCrossRef Ruiz-Jarabo CM, Arias M, Baranowski E, Escarmis C, Domingo E: Memory in viral quasispecies. J Virol 2000, 74: 3543-3547. 10.1128/JVI.74.8.3543-3547.2000PubMedPubMedCentralCrossRef
21.
go back to reference Domingo E, Pariente N, Airaksinen A, Gonzalez-Lopez C, Sierra S, Herrera M, Grande-Perez A, Lowenstein PR, Manrubia SC, Lazaro E, Escarmis C: Foot-and-mouth disease virus evolution: exploring pathways towards virus extinction. populations are quasispecies. Curr Top Microbiol Immunol 2005, 288: 149-173.PubMed Domingo E, Pariente N, Airaksinen A, Gonzalez-Lopez C, Sierra S, Herrera M, Grande-Perez A, Lowenstein PR, Manrubia SC, Lazaro E, Escarmis C: Foot-and-mouth disease virus evolution: exploring pathways towards virus extinction. populations are quasispecies. Curr Top Microbiol Immunol 2005, 288: 149-173.PubMed
22.
go back to reference Domingo E, Escarmis C, Baranowski E, Ruiz-Jarabo CM, Carrillo E, Nunez JI, Sobrino F: Evolution of foot-and-mouth disease virus. Virus Res 2003, 91: 47-63. 10.1016/S0168-1702(02)00259-9PubMedCrossRef Domingo E, Escarmis C, Baranowski E, Ruiz-Jarabo CM, Carrillo E, Nunez JI, Sobrino F: Evolution of foot-and-mouth disease virus. Virus Res 2003, 91: 47-63. 10.1016/S0168-1702(02)00259-9PubMedCrossRef
23.
go back to reference Domingo E, Escarmis C, Lazaro E, Manrubia SC: Quasispecies dynamics and RNA virus extinction. Virus Res 2005, 107: 129-139. 10.1016/j.virusres.2004.11.003PubMedCrossRef Domingo E, Escarmis C, Lazaro E, Manrubia SC: Quasispecies dynamics and RNA virus extinction. Virus Res 2005, 107: 129-139. 10.1016/j.virusres.2004.11.003PubMedCrossRef
25.
go back to reference Yang B, Lan X, Li X, Yin X, Li B, Han X, Li Y, Zhang Z, Liu J: A novel bi-functional DNA vaccine expressing VP1 protein and producing antisense RNA targeted to 5′UTR of foot-and-mouth disease virus can induce both rapid inhibitory effect and specific immune response in mice. Vaccine 2008, 26: 5477-5483. 10.1016/j.vaccine.2008.07.060PubMedCrossRef Yang B, Lan X, Li X, Yin X, Li B, Han X, Li Y, Zhang Z, Liu J: A novel bi-functional DNA vaccine expressing VP1 protein and producing antisense RNA targeted to 5′UTR of foot-and-mouth disease virus can induce both rapid inhibitory effect and specific immune response in mice. Vaccine 2008, 26: 5477-5483. 10.1016/j.vaccine.2008.07.060PubMedCrossRef
26.
go back to reference Chen W, Yan W, Du Q, Fei L, Liu M, Ni Z, Sheng Z, Zheng Z: RNA interference targeting VP1 inhibits foot-and-mouth disease virus replication in BHK-21 cells and suckling mice. J Virol 2004, 78: 6900-6907. 10.1128/JVI.78.13.6900-6907.2004PubMedPubMedCentralCrossRef Chen W, Yan W, Du Q, Fei L, Liu M, Ni Z, Sheng Z, Zheng Z: RNA interference targeting VP1 inhibits foot-and-mouth disease virus replication in BHK-21 cells and suckling mice. J Virol 2004, 78: 6900-6907. 10.1128/JVI.78.13.6900-6907.2004PubMedPubMedCentralCrossRef
27.
go back to reference Kahana R, Kuznetzova L, Rogel A, Shemesh M, Hai D, Yadin H, Stram Y: Inhibition of foot-and-mouth disease virus replication by small interfering RNA. J Gen Virol 2004, 85: 3213-3217. 10.1099/vir.0.80133-0PubMedCrossRef Kahana R, Kuznetzova L, Rogel A, Shemesh M, Hai D, Yadin H, Stram Y: Inhibition of foot-and-mouth disease virus replication by small interfering RNA. J Gen Virol 2004, 85: 3213-3217. 10.1099/vir.0.80133-0PubMedCrossRef
28.
go back to reference Grubman MJ, De los Santos T: Rapid control of foot-and-mouth disease outbreaks: is RNAi a possible solution? Trends Immunol 2005, 26: 65-68. 10.1016/j.it.2004.12.002PubMedCrossRef Grubman MJ, De los Santos T: Rapid control of foot-and-mouth disease outbreaks: is RNAi a possible solution? Trends Immunol 2005, 26: 65-68. 10.1016/j.it.2004.12.002PubMedCrossRef
29.
go back to reference Chen W, Liu M, Jiao Y, Yan W, Wei X, Chen J, Fei L, Liu Y, Zuo X, Yang F, Lu Y, Zheng Z: Adenovirus-mediated RNA interference against foot-and-mouth disease virus infection both in vitro and in vivo . J Virol 2006, 80: 3559-3566. 10.1128/JVI.80.7.3559-3566.2006PubMedPubMedCentralCrossRef Chen W, Liu M, Jiao Y, Yan W, Wei X, Chen J, Fei L, Liu Y, Zuo X, Yang F, Lu Y, Zheng Z: Adenovirus-mediated RNA interference against foot-and-mouth disease virus infection both in vitro and in vivo . J Virol 2006, 80: 3559-3566. 10.1128/JVI.80.7.3559-3566.2006PubMedPubMedCentralCrossRef
30.
go back to reference Kim SM, Lee KN, Park JY, Ko YJ, Joo YS, Kim HS, Park JH: Therapeutic application of RNA interference against foot-and-mouth disease virus i n vitro and in vivo . Antiviral Res 2008, 80: 178-184. 10.1016/j.antiviral.2008.06.001PubMedCrossRef Kim SM, Lee KN, Park JY, Ko YJ, Joo YS, Kim HS, Park JH: Therapeutic application of RNA interference against foot-and-mouth disease virus i n vitro and in vivo . Antiviral Res 2008, 80: 178-184. 10.1016/j.antiviral.2008.06.001PubMedCrossRef
31.
go back to reference Wang PY, Ren Y, Guo ZR, Chen CF: Inhibition of foot-and-mouth disease virus replication in vitro and in vivo by small interfering RNA. Virol J 2008, 5: 86. 10.1186/1743-422X-5-86CrossRef Wang PY, Ren Y, Guo ZR, Chen CF: Inhibition of foot-and-mouth disease virus replication in vitro and in vivo by small interfering RNA. Virol J 2008, 5: 86. 10.1186/1743-422X-5-86CrossRef
32.
go back to reference Lv K, Guo YJ, Zhang YL, Wang KY, Li K, Zhu Y, Sun SH: Transient inhibition of foot-and-mouth disease virus replication by siRNAs silencing VP1 protein coding region. Res Vet Sci 2009, 86: 443-452. 10.1016/j.rvsc.2008.10.011PubMedCrossRef Lv K, Guo YJ, Zhang YL, Wang KY, Li K, Zhu Y, Sun SH: Transient inhibition of foot-and-mouth disease virus replication by siRNAs silencing VP1 protein coding region. Res Vet Sci 2009, 86: 443-452. 10.1016/j.rvsc.2008.10.011PubMedCrossRef
33.
go back to reference Cong W, Cui SQ, Chen JL, Zuo XP, Lu YG, Yan WY, Zheng ZX: Construction of a multiple targeting RNAi plasmid that inhibits target gene expression and FMDV replication in BHK-21 cells and suckling mice. Vet Res Commun 2010, 34: 335-346. 10.1007/s11259-010-9360-yPubMedCrossRef Cong W, Cui SQ, Chen JL, Zuo XP, Lu YG, Yan WY, Zheng ZX: Construction of a multiple targeting RNAi plasmid that inhibits target gene expression and FMDV replication in BHK-21 cells and suckling mice. Vet Res Commun 2010, 34: 335-346. 10.1007/s11259-010-9360-yPubMedCrossRef
34.
go back to reference Boden D, Pusch O, Lee F, Tucker L, Ramratnam B: Human immunodeficiency virus type 1 escape from RNA interference. J Virol 2003, 77: 11531-11535. 10.1128/JVI.77.21.11531-11535.2003PubMedPubMedCentralCrossRef Boden D, Pusch O, Lee F, Tucker L, Ramratnam B: Human immunodeficiency virus type 1 escape from RNA interference. J Virol 2003, 77: 11531-11535. 10.1128/JVI.77.21.11531-11535.2003PubMedPubMedCentralCrossRef
35.
go back to reference Pusch O, Boden D, Silbermann R, Lee F, Tucker L, Ramratnam B: Nucleotide sequence homology requirements of HIV-1-specific short hairpin RNA. Nucleic Acids Res 2003, 31: 6444-6449. 10.1093/nar/gkg876PubMedPubMedCentralCrossRef Pusch O, Boden D, Silbermann R, Lee F, Tucker L, Ramratnam B: Nucleotide sequence homology requirements of HIV-1-specific short hairpin RNA. Nucleic Acids Res 2003, 31: 6444-6449. 10.1093/nar/gkg876PubMedPubMedCentralCrossRef
36.
go back to reference Gitlin L, Stone JK, Andino R: Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches. J Virol 2005, 79: 1027-1035. 10.1128/JVI.79.2.1027-1035.2005PubMedPubMedCentralCrossRef Gitlin L, Stone JK, Andino R: Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches. J Virol 2005, 79: 1027-1035. 10.1128/JVI.79.2.1027-1035.2005PubMedPubMedCentralCrossRef
37.
go back to reference Sabariegos R, Giménez-Barcons M, Tàpia N, Clotet B, Martínez MA: Sequence homology required by human immunodeficiency virus type 1 to escape from short interfering RNAs. J Virol 2006, 80: 571-577. 10.1128/JVI.80.2.571-577.2006PubMedPubMedCentralCrossRef Sabariegos R, Giménez-Barcons M, Tàpia N, Clotet B, Martínez MA: Sequence homology required by human immunodeficiency virus type 1 to escape from short interfering RNAs. J Virol 2006, 80: 571-577. 10.1128/JVI.80.2.571-577.2006PubMedPubMedCentralCrossRef
38.
go back to reference Kim SM, Lee KN, Lee SJ, Ko YJ, Lee HS, Kweon CH, Kim HS, Park JH: Multiple shRNAs driven by U6 and CMV promoter enhances efficiency of antiviral effects against foot-and-mouth disease virus. Antiviral Res 2010, 87: 307-317. 10.1016/j.antiviral.2010.06.004PubMedCrossRef Kim SM, Lee KN, Lee SJ, Ko YJ, Lee HS, Kweon CH, Kim HS, Park JH: Multiple shRNAs driven by U6 and CMV promoter enhances efficiency of antiviral effects against foot-and-mouth disease virus. Antiviral Res 2010, 87: 307-317. 10.1016/j.antiviral.2010.06.004PubMedCrossRef
39.
go back to reference Nilsen TW: Mechanisms of microRNA-mediated gene regulation in animal cells. Trends Genet 2007, 23: 243-249. 10.1016/j.tig.2007.02.011PubMedCrossRef Nilsen TW: Mechanisms of microRNA-mediated gene regulation in animal cells. Trends Genet 2007, 23: 243-249. 10.1016/j.tig.2007.02.011PubMedCrossRef
40.
go back to reference Filipowicz W, Bhattacharyya SN, Sonenberg N: Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat Rev Genet 2008, 9: 102-114.PubMedCrossRef Filipowicz W, Bhattacharyya SN, Sonenberg N: Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat Rev Genet 2008, 9: 102-114.PubMedCrossRef
41.
go back to reference Du JZ, Gao SD, Luo JH, Zhang GF, Cong GZ, Shao JJ, Lin T, Cai XP, Chang HY: Effective inhibition of foot-and-mouth disease virus (FMDV) replication in vitro by vector-delivered microRNAs targeting the 3D gene. Virol J 2011, 8: 292. 10.1186/1743-422X-8-292PubMedPubMedCentralCrossRef Du JZ, Gao SD, Luo JH, Zhang GF, Cong GZ, Shao JJ, Lin T, Cai XP, Chang HY: Effective inhibition of foot-and-mouth disease virus (FMDV) replication in vitro by vector-delivered microRNAs targeting the 3D gene. Virol J 2011, 8: 292. 10.1186/1743-422X-8-292PubMedPubMedCentralCrossRef
42.
go back to reference Carrington JC, Ambros V: Role of microRNAs in plant and animal development. Science 2003, 301: 336-338. 10.1126/science.1085242PubMedCrossRef Carrington JC, Ambros V: Role of microRNAs in plant and animal development. Science 2003, 301: 336-338. 10.1126/science.1085242PubMedCrossRef
43.
go back to reference Pillai RS, Bhattacharyya SN, Filipowicz W: Repression of protein synthesis by miRNAs: how many mechanisms? Trends Cell Biol 2007, 17: 118-126. 10.1016/j.tcb.2006.12.007PubMedCrossRef Pillai RS, Bhattacharyya SN, Filipowicz W: Repression of protein synthesis by miRNAs: how many mechanisms? Trends Cell Biol 2007, 17: 118-126. 10.1016/j.tcb.2006.12.007PubMedCrossRef
45.
go back to reference He L, Hannon GJ: MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet 2004, 5: 522-531. 10.1038/nrg1379PubMedCrossRef He L, Hannon GJ: MicroRNAs: small RNAs with a big role in gene regulation. Nat Rev Genet 2004, 5: 522-531. 10.1038/nrg1379PubMedCrossRef
47.
go back to reference Fernández-Miragall O, Martínez-Salas E: Structural organization of a viral IRES depends on the integrity of the GNRA motif. RNA 2003, 9: 1333-1344. 10.1261/rna.5950603PubMedPubMedCentralCrossRef Fernández-Miragall O, Martínez-Salas E: Structural organization of a viral IRES depends on the integrity of the GNRA motif. RNA 2003, 9: 1333-1344. 10.1261/rna.5950603PubMedPubMedCentralCrossRef
48.
go back to reference Drew J, Belsham GJ: Trans-complementation by RNA of defective FMDV internal ribosome entry site elements. J Virol 1994, 68: 697-703.PubMedPubMedCentral Drew J, Belsham GJ: Trans-complementation by RNA of defective FMDV internal ribosome entry site elements. J Virol 1994, 68: 697-703.PubMedPubMedCentral
49.
go back to reference Ramos R, Martinez-Salas E: Long-range RNA interactions between strutural domains of the aphthovirus internal ribosome entry site (IRES). RNA 1999, 5: 1374-1383. 10.1017/S1355838299991240PubMedPubMedCentralCrossRef Ramos R, Martinez-Salas E: Long-range RNA interactions between strutural domains of the aphthovirus internal ribosome entry site (IRES). RNA 1999, 5: 1374-1383. 10.1017/S1355838299991240PubMedPubMedCentralCrossRef
50.
go back to reference Roberts LO, Belsham GJ: Complementation of defective picornavirus internal ribosome entry site (IRES) elements by the coexpression of fragments of the IRES. Virology 1997, 227: 53-62. 10.1006/viro.1996.8312PubMedCrossRef Roberts LO, Belsham GJ: Complementation of defective picornavirus internal ribosome entry site (IRES) elements by the coexpression of fragments of the IRES. Virology 1997, 227: 53-62. 10.1006/viro.1996.8312PubMedCrossRef
51.
go back to reference Gutiérrez A, Martínez-Salas E, Pintado B, Sobrino F: Specific inhibition of aphthovirus infection by RNAs transcribed from both the 5′ and the 3′ noncoding regions. J Virol 1994, 68: 7426-7432.PubMedPubMedCentral Gutiérrez A, Martínez-Salas E, Pintado B, Sobrino F: Specific inhibition of aphthovirus infection by RNAs transcribed from both the 5′ and the 3′ noncoding regions. J Virol 1994, 68: 7426-7432.PubMedPubMedCentral
52.
go back to reference Bigeriego P, Rosas MF, Zamora E, Martínez-Salas E, Sobrino F: Heterotypic inhibition of foot-and-mouth disease virus infection by combinations of RNA transcripts corresponding to the 5′ and 3′ regions. Antiviral Res 1999, 44: 133-141. 10.1016/S0166-3542(99)00057-1PubMedCrossRef Bigeriego P, Rosas MF, Zamora E, Martínez-Salas E, Sobrino F: Heterotypic inhibition of foot-and-mouth disease virus infection by combinations of RNA transcripts corresponding to the 5′ and 3′ regions. Antiviral Res 1999, 44: 133-141. 10.1016/S0166-3542(99)00057-1PubMedCrossRef
53.
go back to reference Rosas MF, Martínez-Salas E, Sobrino F: Stable expression of antisense RNAs targeted to the 5′ non-coding region confers heterotypic inhibition to foot-and-mouth disease virus infection. J Gen Virol 2003, 84: 393-402. 10.1099/vir.0.18668-0PubMedCrossRef Rosas MF, Martínez-Salas E, Sobrino F: Stable expression of antisense RNAs targeted to the 5′ non-coding region confers heterotypic inhibition to foot-and-mouth disease virus infection. J Gen Virol 2003, 84: 393-402. 10.1099/vir.0.18668-0PubMedCrossRef
54.
go back to reference Rodríguez-Pulido M, Sobrino F, Borrego B, Sáiz M: Inoculation of newborn mice with non-coding regions of foot-and-mouth disease virus RNA can induce a rapid, solid and wide-range protection against viral infection. Antiviral Res 2011, 92: 500-504. 10.1016/j.antiviral.2011.10.005PubMedCrossRef Rodríguez-Pulido M, Sobrino F, Borrego B, Sáiz M: Inoculation of newborn mice with non-coding regions of foot-and-mouth disease virus RNA can induce a rapid, solid and wide-range protection against viral infection. Antiviral Res 2011, 92: 500-504. 10.1016/j.antiviral.2011.10.005PubMedCrossRef
55.
go back to reference Joyappa DH, Sasi S, Ashok KC, Reddy GR, Suryanarayana VV: The plasmid constructs producing shRNA corresponding to the conserved 3D polymerase of foot and mouth disease virus protects guinea pigs against challenge virus. Vet Res Commun 2009, 33: 263-271. 10.1007/s11259-008-9174-3PubMedCrossRef Joyappa DH, Sasi S, Ashok KC, Reddy GR, Suryanarayana VV: The plasmid constructs producing shRNA corresponding to the conserved 3D polymerase of foot and mouth disease virus protects guinea pigs against challenge virus. Vet Res Commun 2009, 33: 263-271. 10.1007/s11259-008-9174-3PubMedCrossRef
56.
go back to reference De Los Santos T, Wu Q, De Avila Botton S, Grubman MJ: Short hairpin RNA targeted to the highly conserved 2B nonstructural protein coding region inhibits replication of multiple serotypes of foot-and-mouth disease virus. Virology 2005, 335: 222-231. 10.1016/j.virol.2005.03.001PubMedCrossRef De Los Santos T, Wu Q, De Avila Botton S, Grubman MJ: Short hairpin RNA targeted to the highly conserved 2B nonstructural protein coding region inhibits replication of multiple serotypes of foot-and-mouth disease virus. Virology 2005, 335: 222-231. 10.1016/j.virol.2005.03.001PubMedCrossRef
57.
go back to reference Stassinopoulos IA, Belsham GJ: A novel protein-RNA binding assay: functional interactions of the foot-and-mouth disease virus internal ribosome entry site with cellular proteins. RNA 2001, 7: 114-122. 10.1017/S1355838201001170PubMedPubMedCentralCrossRef Stassinopoulos IA, Belsham GJ: A novel protein-RNA binding assay: functional interactions of the foot-and-mouth disease virus internal ribosome entry site with cellular proteins. RNA 2001, 7: 114-122. 10.1017/S1355838201001170PubMedPubMedCentralCrossRef
58.
go back to reference Martínez-Salas E: The impact of RNA structure on picornavirus IRES activity. Trends Microbiol 2008, 16: 230-237. 10.1016/j.tim.2008.01.013PubMedCrossRef Martínez-Salas E: The impact of RNA structure on picornavirus IRES activity. Trends Microbiol 2008, 16: 230-237. 10.1016/j.tim.2008.01.013PubMedCrossRef
59.
go back to reference Wilson JA, Richardson CD: Hepatitis C virus replicons escape RNA interference induced by a short interfering RNA directed against the NS5b coding region. J Virol 2005, 79: 7050-7058. 10.1128/JVI.79.11.7050-7058.2005PubMedPubMedCentralCrossRef Wilson JA, Richardson CD: Hepatitis C virus replicons escape RNA interference induced by a short interfering RNA directed against the NS5b coding region. J Virol 2005, 79: 7050-7058. 10.1128/JVI.79.11.7050-7058.2005PubMedPubMedCentralCrossRef
60.
go back to reference Bai X, Li P, Bao H, Liu Z, Li D, Lu Z, Cao Y, Shang Y, Shao J, Chang H, Luo J, Liu X: Evolution and molecular epidemiology of foot-and-mouth disease virus in China. Chin Sci Bull 2011, 56: 2191-2201. 10.1007/s11434-011-4563-3CrossRef Bai X, Li P, Bao H, Liu Z, Li D, Lu Z, Cao Y, Shang Y, Shao J, Chang H, Luo J, Liu X: Evolution and molecular epidemiology of foot-and-mouth disease virus in China. Chin Sci Bull 2011, 56: 2191-2201. 10.1007/s11434-011-4563-3CrossRef
61.
go back to reference Cong W, Jin H, Jiang C, Yan W, Liu M, Chen J, Zuo X, Zheng Z: Attenuated Salmonella choleraesuis-mediated RNAi targeted to conserved regions against foot-and-mouth disease virus in guinea pigs and Swine. Vet Res 2010, 41: 30. 10.1051/vetres/2010002PubMedPubMedCentralCrossRef Cong W, Jin H, Jiang C, Yan W, Liu M, Chen J, Zuo X, Zheng Z: Attenuated Salmonella choleraesuis-mediated RNAi targeted to conserved regions against foot-and-mouth disease virus in guinea pigs and Swine. Vet Res 2010, 41: 30. 10.1051/vetres/2010002PubMedPubMedCentralCrossRef
62.
go back to reference Bao HF, Li D, Sun P, Zhou Q, Hu J, Bai XW, Fu YF, Lu ZJ, Liu ZX: The infectivity and pathogenicity of a foot-and-mouth disease virus persistent infection strain from oesophageal-pharyngeal fluid of a Chinese cattle in 2010. Virol J 2011, 8: 536. 10.1186/1743-422X-8-536PubMedPubMedCentralCrossRef Bao HF, Li D, Sun P, Zhou Q, Hu J, Bai XW, Fu YF, Lu ZJ, Liu ZX: The infectivity and pathogenicity of a foot-and-mouth disease virus persistent infection strain from oesophageal-pharyngeal fluid of a Chinese cattle in 2010. Virol J 2011, 8: 536. 10.1186/1743-422X-8-536PubMedPubMedCentralCrossRef
63.
go back to reference Escarmís C, Carrillo EC, Ferrer M, Arriaza JF, Lopez N, Tami C, Verdaguer N, Domingo E, Franze-Fernández MT: Rapid selection in modified BHK-21 cells of a foot-and-mouth disease virus variant showing alterations in cell tropism. J Virol 1998, 72: 10171-10179.PubMedPubMedCentral Escarmís C, Carrillo EC, Ferrer M, Arriaza JF, Lopez N, Tami C, Verdaguer N, Domingo E, Franze-Fernández MT: Rapid selection in modified BHK-21 cells of a foot-and-mouth disease virus variant showing alterations in cell tropism. J Virol 1998, 72: 10171-10179.PubMedPubMedCentral
64.
go back to reference Vagnozzi A, Stein DA, Iversen PL, Rieder E: Inhibition of foot-and-mouth disease virus infections in cell cultures with antisense morpholino oligomers. J Virol 2007, 81: 11669-11680. 10.1128/JVI.00557-07PubMedPubMedCentralCrossRef Vagnozzi A, Stein DA, Iversen PL, Rieder E: Inhibition of foot-and-mouth disease virus infections in cell cultures with antisense morpholino oligomers. J Virol 2007, 81: 11669-11680. 10.1128/JVI.00557-07PubMedPubMedCentralCrossRef
65.
go back to reference Fajardo T Jr, Rosas MF, Sobrino F, Martinez-Salas E: Exploring IRES region accessibility by interference of foot-and-mouth disease virus infectivity. PLoS One 2012, 7: e41382. 10.1371/journal.pone.0041382PubMedPubMedCentralCrossRef Fajardo T Jr, Rosas MF, Sobrino F, Martinez-Salas E: Exploring IRES region accessibility by interference of foot-and-mouth disease virus infectivity. PLoS One 2012, 7: e41382. 10.1371/journal.pone.0041382PubMedPubMedCentralCrossRef
66.
go back to reference Norder H, De Palma AM, Selisko B, Costenaro L, Papageorgiou N, Arnan C, Coutard B, Lantez V, De Lamballerie X, Baronti C, Solà M, Tan J, Neyts J, Canard B, Coll M, Gorbalenya AE, Hilgenfeld R: Picornavirus non-structural proteins as targets for new anti-virals with broad activity. Antiviral Res 2011, 89: 204-218. 10.1016/j.antiviral.2010.12.007PubMedCrossRef Norder H, De Palma AM, Selisko B, Costenaro L, Papageorgiou N, Arnan C, Coutard B, Lantez V, De Lamballerie X, Baronti C, Solà M, Tan J, Neyts J, Canard B, Coll M, Gorbalenya AE, Hilgenfeld R: Picornavirus non-structural proteins as targets for new anti-virals with broad activity. Antiviral Res 2011, 89: 204-218. 10.1016/j.antiviral.2010.12.007PubMedCrossRef
67.
go back to reference Cao YM, Lu ZJ, Sun P, Fu YF, Tian FP, Hao XF, Bao HF, Liu XT, Liu ZX: A pseudotype baculovirus expressing the capsid protein of foot-and-mouth disease virus and a T-cell immunogen shows enhanced immunogenicity in mice. Virol J 2011, 8: 77. 10.1186/1743-422X-8-77PubMedPubMedCentralCrossRef Cao YM, Lu ZJ, Sun P, Fu YF, Tian FP, Hao XF, Bao HF, Liu XT, Liu ZX: A pseudotype baculovirus expressing the capsid protein of foot-and-mouth disease virus and a T-cell immunogen shows enhanced immunogenicity in mice. Virol J 2011, 8: 77. 10.1186/1743-422X-8-77PubMedPubMedCentralCrossRef
68.
go back to reference Liu XS, Wang YL, Zhang YG, Fang YZ, Pan L, Lu JL, Zhou P, Zhang ZW, Jiang ST: Identification of H-2d restricted T cell epitope of foot-and-mouth disease virus structural protein VP1. Virol J 2011, 8: 426. 10.1186/1743-422X-8-426PubMedPubMedCentralCrossRef Liu XS, Wang YL, Zhang YG, Fang YZ, Pan L, Lu JL, Zhou P, Zhang ZW, Jiang ST: Identification of H-2d restricted T cell epitope of foot-and-mouth disease virus structural protein VP1. Virol J 2011, 8: 426. 10.1186/1743-422X-8-426PubMedPubMedCentralCrossRef
Metadata
Title
Multiple microRNAs targeted to internal ribosome entry site against foot-and-mouth disease virus infection in vitro and in vivo
Authors
Yanyan Chang
Yongxi Dou
Huifang Bao
Xuenong Luo
Xuerong Liu
Kebin Mu
Zaixin Liu
Xiangtao Liu
Xuepeng Cai
Publication date
01-12-2014
Publisher
BioMed Central
Published in
Virology Journal / Issue 1/2014
Electronic ISSN: 1743-422X
DOI
https://doi.org/10.1186/1743-422X-11-1

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