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Published in: BMC Medicine 1/2004

Open Access 01-12-2004 | Research article

Developing optimal search strategies for detecting clinically sound prognostic studies in MEDLINE: an analytic survey

Authors: Nancy L Wilczynski, R Brian Haynes, the Hedges Team

Published in: BMC Medicine | Issue 1/2004

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Abstract

Background

Clinical end users of MEDLINE have a difficult time retrieving articles that are both scientifically sound and directly relevant to clinical practice. Search filters have been developed to assist end users in increasing the success of their searches. Many filters have been developed for the literature on therapy and reviews but little has been done in the area of prognosis. The objective of this study is to determine how well various methodologic textwords, Medical Subject Headings, and their Boolean combinations retrieve methodologically sound literature on the prognosis of health disorders in MEDLINE.

Methods

An analytic survey was conducted, comparing hand searches of journals with retrievals from MEDLINE for candidate search terms and combinations. Six research assistants read all issues of 161 journals for the publishing year 2000. All articles were rated using purpose and quality indicators and categorized into clinically relevant original studies, review articles, general papers, or case reports. The original and review articles were then categorized as 'pass' or 'fail' for methodologic rigor in the areas of prognosis and other clinical topics. Candidate search strategies were developed for prognosis and run in MEDLINE – the retrievals being compared with the hand search data. The sensitivity, specificity, precision, and accuracy of the search strategies were calculated.

Results

12% of studies classified as prognosis met basic criteria for scientific merit for testing clinical applications. Combinations of terms reached peak sensitivities of 90%. Compared with the best single term, multiple terms increased sensitivity for sound studies by 25.2% (absolute increase), and increased specificity, but by a much smaller amount (1.1%) when sensitivity was maximized. Combining terms to optimize both sensitivity and specificity achieved sensitivities and specificities of approximately 83% for each.

Conclusion

Empirically derived search strategies combining indexing terms and textwords can achieve high sensitivity and specificity for retrieving sound prognostic studies from MEDLINE.
Literature
1.
go back to reference Haynes RB, Sackett DL, Tugwell P: Problems in the handling of clinical and research evidence by medical practitioners. Arch Intern Med. 1983, 143: 1971-1975. 10.1001/archinte.143.10.1971.CrossRefPubMed Haynes RB, Sackett DL, Tugwell P: Problems in the handling of clinical and research evidence by medical practitioners. Arch Intern Med. 1983, 143: 1971-1975. 10.1001/archinte.143.10.1971.CrossRefPubMed
2.
go back to reference Martinez JL, Licea Serrato J de D, Jimenez R, Grimes RM: HIV/AIDS practice pattern, knowledge, and education needs among Hispanic clinicians in Texas, USA, and Nuevo Leon, Mexico. Rev Panam Salud Publica. 1998, 4: 14-19.CrossRefPubMed Martinez JL, Licea Serrato J de D, Jimenez R, Grimes RM: HIV/AIDS practice pattern, knowledge, and education needs among Hispanic clinicians in Texas, USA, and Nuevo Leon, Mexico. Rev Panam Salud Publica. 1998, 4: 14-19.CrossRefPubMed
3.
go back to reference Covell DG, Uman GC, Manning PR: Information needs in office practice: are they being met?. Ann Intern Med. 1985, 103: 596-599.CrossRefPubMed Covell DG, Uman GC, Manning PR: Information needs in office practice: are they being met?. Ann Intern Med. 1985, 103: 596-599.CrossRefPubMed
5.
go back to reference Balas EA, Stockham MG, Mitchell JA, Sievert ME, Ewigman BG, Boren SA: In search of controlled evidence for health care quality improvement. J Med Syst. 1997, 21: 21-32. 10.1023/A:1022887224126.CrossRefPubMed Balas EA, Stockham MG, Mitchell JA, Sievert ME, Ewigman BG, Boren SA: In search of controlled evidence for health care quality improvement. J Med Syst. 1997, 21: 21-32. 10.1023/A:1022887224126.CrossRefPubMed
6.
go back to reference Ely JW, Osheroff JA, Ebell MH, Chambliss ML, Vinson DC, Stevermer JJ, Pifer EA: Obstacles to answering doctors' questions about patient care with evidence: qualitative study. BMJ. 2002, 324: 710-10.1136/bmj.324.7339.710.CrossRefPubMedPubMedCentral Ely JW, Osheroff JA, Ebell MH, Chambliss ML, Vinson DC, Stevermer JJ, Pifer EA: Obstacles to answering doctors' questions about patient care with evidence: qualitative study. BMJ. 2002, 324: 710-10.1136/bmj.324.7339.710.CrossRefPubMedPubMedCentral
7.
go back to reference Haynes RB, McKibbon KA, Fitzgerald D, Guyatt GH, Walker CJ, Sackett DL: How to keep up with the medical literature: V. Access by personal computer to the medical literature. Ann Intern Med. 1986, 105: 810-816.CrossRefPubMed Haynes RB, McKibbon KA, Fitzgerald D, Guyatt GH, Walker CJ, Sackett DL: How to keep up with the medical literature: V. Access by personal computer to the medical literature. Ann Intern Med. 1986, 105: 810-816.CrossRefPubMed
8.
go back to reference Nwosu CR, Khan KS, Chien PF: A two-term MEDLINE search strategy for identifying randomized trials in obstetrics and gynecology. Obstet Gynecol. 1998, 91: 618-622. 10.1016/S0029-7844(97)00703-5.PubMed Nwosu CR, Khan KS, Chien PF: A two-term MEDLINE search strategy for identifying randomized trials in obstetrics and gynecology. Obstet Gynecol. 1998, 91: 618-622. 10.1016/S0029-7844(97)00703-5.PubMed
9.
go back to reference Robinson KA, Dickersin K: Development of a highly sensitive search strategy for the retrieval of reports of controlled trials using PubMed. Int J Epidemiol. 2002, 31: 150-153. 10.1093/ije/31.1.150.CrossRefPubMed Robinson KA, Dickersin K: Development of a highly sensitive search strategy for the retrieval of reports of controlled trials using PubMed. Int J Epidemiol. 2002, 31: 150-153. 10.1093/ije/31.1.150.CrossRefPubMed
10.
go back to reference Bachmann LM, Coray R, Estermann P, Ter Riet G: Identifying diagnostic studies in MEDLINE: reducing the number needed to read. J Am Med Inform Assoc. 2002, 9: 653-658. 10.1197/jamia.M1124.CrossRefPubMedPubMedCentral Bachmann LM, Coray R, Estermann P, Ter Riet G: Identifying diagnostic studies in MEDLINE: reducing the number needed to read. J Am Med Inform Assoc. 2002, 9: 653-658. 10.1197/jamia.M1124.CrossRefPubMedPubMedCentral
11.
go back to reference Wilczynski NL, Walker CJ, McKibbon KA, Haynes RB: Assessment of methodologic search filters in MEDLINE. Proc Annu Symp Comput Appl Med Care. 1993, 601-605. Wilczynski NL, Walker CJ, McKibbon KA, Haynes RB: Assessment of methodologic search filters in MEDLINE. Proc Annu Symp Comput Appl Med Care. 1993, 601-605.
12.
go back to reference Haynes RB, Wilczynski N, McKibbon KA, Walker CJ, Sinclair JC: Developing optimal search strategies for detecting clinically sound studies in MEDLINE. J Am Med Inform Assoc. 1994, 1: 447-458.CrossRefPubMedPubMedCentral Haynes RB, Wilczynski N, McKibbon KA, Walker CJ, Sinclair JC: Developing optimal search strategies for detecting clinically sound studies in MEDLINE. J Am Med Inform Assoc. 1994, 1: 447-458.CrossRefPubMedPubMedCentral
14.
go back to reference Wilczynski NL, Haynes RB: Robustness of Empirical Search Strategies for Clinical Content in MEDLINE. Proc AMIA Symp. 2002, 904-908. Wilczynski NL, Haynes RB: Robustness of Empirical Search Strategies for Clinical Content in MEDLINE. Proc AMIA Symp. 2002, 904-908.
15.
go back to reference Wilczynski NL, McKibbon KA, Haynes RB: Enhancing retrieval of best evidence for health care from bibliographic databases: calibration of the hand search of the literature. Medinfo. 2001, 10 (Pt 1): 390-393. Wilczynski NL, McKibbon KA, Haynes RB: Enhancing retrieval of best evidence for health care from bibliographic databases: calibration of the hand search of the literature. Medinfo. 2001, 10 (Pt 1): 390-393.
Metadata
Title
Developing optimal search strategies for detecting clinically sound prognostic studies in MEDLINE: an analytic survey
Authors
Nancy L Wilczynski
R Brian Haynes
the Hedges Team
Publication date
01-12-2004
Publisher
BioMed Central
Published in
BMC Medicine / Issue 1/2004
Electronic ISSN: 1741-7015
DOI
https://doi.org/10.1186/1741-7015-2-23

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